RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 SOCS3O14543 225 aa12.25□□□□□ -0.45
CLIP4-201ENST00000320081 KLK12Q9UKR0 248 aa12.25□□□□□ -0.45
CLIP4-201ENST00000320081 FSTL3O95633 263 aa12.24□□□□□ -0.45
CLIP4-201ENST00000320081 Q6ZSV7 163 aa12.24□□□□□ -0.45
CLIP4-201ENST00000320081 DEFB114Q30KQ6 69 aa12.24□□□□□ -0.45
CLIP4-201ENST00000320081 DEFB105AQ8NG35 78 aa12.24□□□□□ -0.45
CLIP4-201ENST00000320081 FOXI1Q12951 378 aa12.24□□□□□ -0.45
CLIP4-201ENST00000320081 IGLV4-3A0A075B6K6 122 aa12.23□□□□□ -0.45
CLIP4-201ENST00000320081 PIK3CD-AS1Q5SR53 167 aa12.23□□□□□ -0.45
CLIP4-201ENST00000320081 NFE4Q86UQ8 179 aa12.23□□□□□ -0.45
CLIP4-201ENST00000320081 IGKV3D-7A0A0C4DH55 119 aa12.23□□□□□ -0.45
CLIP4-201ENST00000320081 ZNF22P17026 224 aaPredicted RBP12.23□□□□□ -0.45
CLIP4-201ENST00000320081 SS18L2Q9UHA2 77 aa12.23□□□□□ -0.45
CLIP4-201ENST00000320081 A0A0J9YXY3 114 aa12.23□□□□□ -0.45
CLIP4-201ENST00000320081 IGHV1-58A0A0C4DH39 117 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 INSL3P51460 131 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 LINC00526Q96FQ7 95 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 NDUFA7O95182 113 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 PSMB8P28062 276 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 C9orf153Q5TBE3 101 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 COL5A1P20908 1838 aaPredicted RBP12.22□□□□□ -0.45
CLIP4-201ENST00000320081 TNRC18O15417 2968 aaPredicted RBP12.22□□□□□ -0.45
CLIP4-201ENST00000320081 APOC4P55056 127 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 SMR3AQ99954 134 aa12.22□□□□□ -0.45
CLIP4-201ENST00000320081 A0A096LNJ9 63 aa12.21□□□□□ -0.45
CLIP4-201ENST00000320081 LOC100131303A0A0U1RQF7 123 aa12.21□□□□□ -0.45
CLIP4-201ENST00000320081 LECT2O14960 151 aa12.21□□□□□ -0.45
CLIP4-201ENST00000320081 TRAV13-2A0A0B4J235 113 aa12.21□□□□□ -0.45
CLIP4-201ENST00000320081 CLUHP3Q96NS8 147 aa12.21□□□□□ -0.45
CLIP4-201ENST00000320081 Q6YL49 198 aa12.21□□□□□ -0.46
CLIP4-201ENST00000320081 TEX49A0A1B0GTD5 131 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 HELZ2Q9BYK8 2649 aaKnown RBP12.2□□□□□ -0.46
CLIP4-201ENST00000320081 INAFM2P0DMQ5 153 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 C16orf74Q96GX8 76 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 COL12A1Q99715 3063 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 C4orf3Q8WVX3 66 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 U3KQK5 164 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 COX7B2Q8TF08 81 aa12.2□□□□□ -0.46
CLIP4-201ENST00000320081 MED14OSP0DP75 135 aa12.19□□□□□ -0.46
CLIP4-201ENST00000320081 DAZ2Q13117 558 aaKnown RBP12.19□□□□□ -0.46
CLIP4-201ENST00000320081 DAZ4Q86SG3 579 aaKnown RBP12.19□□□□□ -0.46
CLIP4-201ENST00000320081 DAZ3Q9NR90 486 aaKnown RBP12.19□□□□□ -0.46
CLIP4-201ENST00000320081 ZNF580Q9UK33 172 aa12.19□□□□□ -0.46
CLIP4-201ENST00000320081 IFITM1P13164 125 aa12.19□□□□□ -0.46
CLIP4-201ENST00000320081 DCANP1Q8TF63 244 aa12.19□□□□□ -0.46
CLIP4-201ENST00000320081 LGALS9O00182 355 aa12.18□□□□□ -0.46
CLIP4-201ENST00000320081 DNAJC30Q96LL9 226 aa12.18□□□□□ -0.46
CLIP4-201ENST00000320081 NCR3O14931 201 aa12.18□□□□□ -0.46
CLIP4-201ENST00000320081 CRYGDP07320 174 aa12.18□□□□□ -0.46
CLIP4-201ENST00000320081 TMEM263Q8WUH6 116 aaKnown RBP12.17□□□□□ -0.46
CLIP4-201ENST00000320081 TM2D2Q9BX73 214 aa12.17□□□□□ -0.46
CLIP4-201ENST00000320081 INAFM1C9JVW0 142 aa12.17□□□□□ -0.46
CLIP4-201ENST00000320081 PCSK5Q92824 1860 aa12.17□□□□□ -0.46
CLIP4-201ENST00000320081 CFAP126Q5VTH2 177 aa12.17□□□□□ -0.46
CLIP4-201ENST00000320081 NKAPP1Q8N9T2 125 aa12.17□□□□□ -0.46
CLIP4-201ENST00000320081 FAM222AQ5U5X8 452 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 IGHV4-28A0A0C4DH34 117 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 MT-ATP8P03928 68 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 ZNF843Q8N446 348 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 COX7A2LO14548 114 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 FAM110AQ9BQ89 295 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 ZNF702PQ9H963 129 aa12.16□□□□□ -0.46
CLIP4-201ENST00000320081 LINC00269Q8N2A0 174 aa12.15□□□□□ -0.46
CLIP4-201ENST00000320081 SLPIP03973 132 aa12.14□□□□□ -0.47
CLIP4-201ENST00000320081 CAMK2N2Q96S95 79 aa12.14□□□□□ -0.47
CLIP4-201ENST00000320081 LOC400499M0QZD8 3231 aa12.14□□□□□ -0.47
CLIP4-201ENST00000320081 CRIP2P52943 208 aaPredicted RBP12.14□□□□□ -0.47
CLIP4-201ENST00000320081 DMDP11532 3685 aa12.14□□□□□ -0.47
CLIP4-201ENST00000320081 SETXQ7Z333 2677 aaKnown RBP12.14□□□□□ -0.47
CLIP4-201ENST00000320081 KLLNB2CW77 178 aa12.14□□□□□ -0.47
CLIP4-201ENST00000320081 HIGD2BQ4VC39 106 aa12.14□□□□□ -0.47
CLIP4-201ENST00000320081 POLR2KP53803 58 aaKnown RBP12.13□□□□□ -0.47
CLIP4-201ENST00000320081 SPART-AS1P0CW21 52 aa12.13□□□□□ -0.47
CLIP4-201ENST00000320081 TRBV27A0A0K0K1C4 114 aa12.13□□□□□ -0.47
CLIP4-201ENST00000320081 TSHBP01222 138 aa12.13□□□□□ -0.47
CLIP4-201ENST00000320081 UBL5Q9BZL1 73 aa12.13□□□□□ -0.47
CLIP4-201ENST00000320081 SPANXB1Q9NS25 103 aaPredicted RBP12.13□□□□□ -0.47
CLIP4-201ENST00000320081 TEX15Q9BXT5 2789 aa12.12□□□□□ -0.47
CLIP4-201ENST00000320081 IGLV1-40P01703 118 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 C1orf43Q9BWL3 253 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 FAM236AA0A1B0GUQ0 79 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 FAM236BA0A1B0GV22 79 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 TRIAP1O43715 76 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 PLA2G2AP14555 144 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 UFSP1Q6NVU6 142 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 RNF152Q8N8N0 203 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 PRB2P02812 416 aaPredicted RBP12.11□□□□□ -0.47
CLIP4-201ENST00000320081 MRPL23Q16540 153 aaKnown RBP12.11□□□□□ -0.47
CLIP4-201ENST00000320081 LINC01006Q8NI28 216 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 OVOL2Q9BRP0 275 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 C14orf132Q9NPU4 83 aa12.11□□□□□ -0.47
CLIP4-201ENST00000320081 WDFY3Q8IZQ1 3526 aa12.1□□□□□ -0.47
CLIP4-201ENST00000320081 TMEM223A0PJW6 202 aa12.1□□□□□ -0.47
CLIP4-201ENST00000320081 NBEAL1Q6ZS30 2694 aa12.1□□□□□ -0.47
CLIP4-201ENST00000320081 HERV-K104P63124 156 aa12.1□□□□□ -0.47
CLIP4-201ENST00000320081 SPAG11BQ08648 103 aa12.1□□□□□ -0.47
CLIP4-201ENST00000320081 XAGE1AQ9HD64 81 aa12.1□□□□□ -0.47
CLIP4-201ENST00000320081 RPL18AQ02543 176 aaKnown RBP12.1□□□□□ -0.47
CLIP4-201ENST00000320081 MIAQ16674 131 aa12.09□□□□□ -0.47
CLIP4-201ENST00000320081 C9orf66Q5T8R8 295 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms