RNA–Protein interactions for RNA: ENST00000316448.9

CALR-201, Transcript of calreticulin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CALR, Length 1,903 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-201ENST00000316448 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.05□□□□□ -0.64
CALR-201ENST00000316448 IGKV2-29A2NJV5 120 aaPredicted RBP11.05□□□□□ -0.64
CALR-201ENST00000316448 CHAC1Q9BUX1 264 aa11.05□□□□□ -0.64
CALR-201ENST00000316448 VCX2Q9H322 139 aa11.05□□□□□ -0.64
CALR-201ENST00000316448 MGAM2Q2M2H8 2515 aa11.05□□□□□ -0.64
CALR-201ENST00000316448 CEMP1Q6PRD7 247 aaPredicted RBP11.05□□□□□ -0.64
CALR-201ENST00000316448 NTM-AS1Q6ZSK4 140 aa11.05□□□□□ -0.64
CALR-201ENST00000316448 NBEAL1Q6ZS30 2694 aa11.05□□□□□ -0.64
CALR-201ENST00000316448 TIMM21Q9BVV7 248 aa11.04□□□□□ -0.64
CALR-201ENST00000316448 HERVK_113P61574 105 aa11.03□□□□□ -0.64
CALR-201ENST00000316448 SEC11AP67812 179 aa11.03□□□□□ -0.64
CALR-201ENST00000316448 LINC00694P0DN24 101 aa11.03□□□□□ -0.64
CALR-201ENST00000316448 DAD1P61803 113 aa11.03□□□□□ -0.64
CALR-201ENST00000316448 MRPS36P82909 103 aaKnown RBP11.03□□□□□ -0.64
CALR-201ENST00000316448 Q6ZUT4 128 aa11.03□□□□□ -0.64
CALR-201ENST00000316448 MYMXA0A1B0GTQ4 84 aa11.02□□□□□ -0.65
CALR-201ENST00000316448 SPART-AS1P0CW21 52 aa11.02□□□□□ -0.65
CALR-201ENST00000316448 TMEM170BQ5T4T1 132 aa11.02□□□□□ -0.65
CALR-201ENST00000316448 GTSF1LQ9H1H1 148 aa11.02□□□□□ -0.65
CALR-201ENST00000316448 A0A0J9YXV3 536 aa11.01□□□□□ -0.65
CALR-201ENST00000316448 ZNF22P17026 224 aaPredicted RBP11.01□□□□□ -0.65
CALR-201ENST00000316448 DEFB121Q5J5C9 76 aa11.01□□□□□ -0.65
CALR-201ENST00000316448 ORAOV1Q8WV07 137 aa11.01□□□□□ -0.65
CALR-201ENST00000316448 ZNF25P17030 456 aaPredicted RBP11□□□□□ -0.65
CALR-201ENST00000316448 C12orf74Q32Q52 190 aa11□□□□□ -0.65
CALR-201ENST00000316448 VSIG2Q96IQ7 327 aa11□□□□□ -0.65
CALR-201ENST00000316448 CSDC2Q9Y534 153 aaKnown RBP11□□□□□ -0.65
CALR-201ENST00000316448 COX11Q9Y6N1 276 aa11□□□□□ -0.65
CALR-201ENST00000316448 TENM3Q9P273 2699 aa11□□□□□ -0.65
CALR-201ENST00000316448 TMEM223A0PJW6 202 aa10.99□□□□□ -0.65
CALR-201ENST00000316448 TSPEAR-AS2P59090 65 aa10.99□□□□□ -0.65
CALR-201ENST00000316448 RNASE13Q5GAN3 156 aaKnown RBP10.99□□□□□ -0.65
CALR-201ENST00000316448 MRAPQ8TCY5 172 aa10.99□□□□□ -0.65
CALR-201ENST00000316448 TAX1BP3O14907 124 aa10.99□□□□□ -0.65
CALR-201ENST00000316448 GYPEP15421 78 aa10.99□□□□□ -0.65
CALR-201ENST00000316448 PRO0255Q9UI72 69 aa10.99□□□□□ -0.65
CALR-201ENST00000316448 ZNF815PA8K554 130 aa10.98□□□□□ -0.65
CALR-201ENST00000316448 A0A0J9YY99 117 aa10.97□□□□□ -0.65
CALR-201ENST00000316448 TINCRA0A1B0GVN0 87 aa10.97□□□□□ -0.65
CALR-201ENST00000316448 TAL2Q16559 108 aa10.97□□□□□ -0.65
CALR-201ENST00000316448 Q6ZVH6 145 aa10.97□□□□□ -0.65
CALR-201ENST00000316448 A0A0J9YWU9 116 aa10.97□□□□□ -0.65
CALR-201ENST00000316448 ATP5G1P05496 136 aa10.97□□□□□ -0.65
CALR-201ENST00000316448 UBE2D1P51668 147 aa10.97□□□□□ -0.65
CALR-201ENST00000316448 TM2D2Q9BX73 214 aa10.97□□□□□ -0.65
CALR-201ENST00000316448 A6NDN8 102 aa10.96□□□□□ -0.65
CALR-201ENST00000316448 F5H768 121 aa10.96□□□□□ -0.65
CALR-201ENST00000316448 PAX4O43316 350 aa10.96□□□□□ -0.65
CALR-201ENST00000316448 HTN3P15516 51 aa10.96□□□□□ -0.65
CALR-201ENST00000316448 TM2D3Q9BRN9 247 aa10.96□□□□□ -0.65
CALR-201ENST00000316448 TMEM243Q9BU79 118 aa10.96□□□□□ -0.65
CALR-201ENST00000316448 DNHD1Q96M86 4753 aa10.96□□□□□ -0.65
CALR-201ENST00000316448 HUWE1Q7Z6Z7 4374 aaKnown RBP10.96□□□□□ -0.66
CALR-201ENST00000316448 J3QQQ9 107 aa10.96□□□□□ -0.66
CALR-201ENST00000316448 FXYD2P54710 66 aa10.96□□□□□ -0.66
CALR-201ENST00000316448 CEND1Q8N111 149 aa10.96□□□□□ -0.66
CALR-201ENST00000316448 C11orf68Q9H3H3 251 aaKnown RBP10.96□□□□□ -0.66
CALR-201ENST00000316448 TRAV26-1A0A087WT03 109 aa10.95□□□□□ -0.66
CALR-201ENST00000316448 A0A096LPF7 62 aa10.95□□□□□ -0.66
CALR-201ENST00000316448 H7C423 109 aa10.95□□□□□ -0.66
CALR-201ENST00000316448 LEPROTO15243 131 aa10.95□□□□□ -0.66
CALR-201ENST00000316448 GCSHP23434 173 aa10.95□□□□□ -0.66
CALR-201ENST00000316448 SMAGPQ0VAQ4 97 aa10.95□□□□□ -0.66
CALR-201ENST00000316448 DGAT2L7PQ6IED9 249 aa10.95□□□□□ -0.66
CALR-201ENST00000316448 IGLV5-45A0A087WSX0 123 aa10.94□□□□□ -0.66
CALR-201ENST00000316448 FAM19A3Q7Z5A8 133 aa10.94□□□□□ -0.66
CALR-201ENST00000316448 PLEKHB2Q96CS7 222 aa10.94□□□□□ -0.66
CALR-201ENST00000316448 TRBV6-8A0A0A6YYG3 113 aa10.93□□□□□ -0.66
CALR-201ENST00000316448 K7EP13 123 aa10.93□□□□□ -0.66
CALR-201ENST00000316448 ATP6V0E2Q8NHE4 81 aa10.93□□□□□ -0.66
CALR-201ENST00000316448 CDC42SE2Q9NRR3 84 aa10.93□□□□□ -0.66
CALR-201ENST00000316448 LGALS3P17931 250 aaKnown RBP10.92□□□□□ -0.66
CALR-201ENST00000316448 TIRAPP58753 221 aa10.92□□□□□ -0.66
CALR-201ENST00000316448 SCGB1D4Q6XE38 83 aa10.92□□□□□ -0.66
CALR-201ENST00000316448 Q6ZTC4 211 aa10.92□□□□□ -0.66
CALR-201ENST00000316448 OR5A1Q8NGJ0 315 aa10.92□□□□□ -0.66
CALR-201ENST00000316448 SPATA25Q9BR10 227 aa10.92□□□□□ -0.66
CALR-201ENST00000316448 H3BRM9 83 aa10.92□□□□□ -0.66
CALR-201ENST00000316448 UBE2L6O14933 153 aa10.92□□□□□ -0.66
CALR-201ENST00000316448 NANOS2P60321 138 aaKnown RBP10.92□□□□□ -0.66
CALR-201ENST00000316448 LINC00469Q8N7U9 141 aa10.92□□□□□ -0.66
CALR-201ENST00000316448 HIST1H4GQ99525 98 aa10.92□□□□□ -0.66
CALR-201ENST00000316448 TEX48A0A1B0GUV7 120 aa10.91□□□□□ -0.66
CALR-201ENST00000316448 IGHV3-64A0A075B6Q5 118 aa10.9□□□□□ -0.66
CALR-201ENST00000316448 IGHV1-58A0A0C4DH39 117 aa10.9□□□□□ -0.66
CALR-201ENST00000316448 IGHV3-30-3P0DP02 117 aa10.9□□□□□ -0.66
CALR-201ENST00000316448 GEMIN7Q9H840 131 aaKnown RBP10.9□□□□□ -0.66
CALR-201ENST00000316448 GAGE6Q13070 117 aa10.9□□□□□ -0.67
CALR-201ENST00000316448 LINC00242Q5T6M2 205 aa10.9□□□□□ -0.67
CALR-201ENST00000316448 AMMECR1LQ6DCA0 310 aa10.9□□□□□ -0.67
CALR-201ENST00000316448 TMEM101Q96IK0 257 aa10.89□□□□□ -0.67
CALR-201ENST00000316448 SPANXB1Q9NS25 103 aaPredicted RBP10.89□□□□□ -0.67
CALR-201ENST00000316448 CDKN2A-AS1Q9UH64 79 aa10.89□□□□□ -0.67
CALR-201ENST00000316448 TRAV8-3A0A0A6YYJ7 113 aa10.88□□□□□ -0.67
CALR-201ENST00000316448 PTTG1IPP53801 180 aa10.88□□□□□ -0.67
CALR-201ENST00000316448 HERVK_113P63121 156 aa10.88□□□□□ -0.67
CALR-201ENST00000316448 DNAH9Q9NYC9 4486 aa10.88□□□□□ -0.67
CALR-201ENST00000316448 C11orf45Q8TAV5 145 aa10.88□□□□□ -0.67
CALR-201ENST00000316448 C9orf118A6NHY6 69 aa10.87□□□□□ -0.67
CALR-201ENST00000316448 COX6A2Q02221 97 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 105.5 ms