RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 LYRM7Q5U5X0 104 aa8.96□□□□□ -0.97
RNF4-201ENST00000314289 TEN1Q86WV5 123 aa8.96□□□□□ -0.97
RNF4-201ENST00000314289 A8MWV9 139 aa8.96□□□□□ -0.98
RNF4-201ENST00000314289 IGHV3-64A0A075B6Q5 118 aa8.96□□□□□ -0.98
RNF4-201ENST00000314289 CFC1BP0CG36 223 aa8.96□□□□□ -0.98
RNF4-201ENST00000314289 CFC1P0CG37 223 aa8.96□□□□□ -0.98
RNF4-201ENST00000314289 ANKRD29Q8N6D5 301 aa8.96□□□□□ -0.98
RNF4-201ENST00000314289 NOP10Q9NPE3 64 aaKnown RBP8.96□□□□□ -0.98
RNF4-201ENST00000314289 NDUFA7O95182 113 aa8.95□□□□□ -0.98
RNF4-201ENST00000314289 RPL32P62910 135 aaKnown RBP8.95□□□□□ -0.98
RNF4-201ENST00000314289 C19orf73Q9NVV2 129 aa8.95□□□□□ -0.98
RNF4-201ENST00000314289 PMVKQ15126 192 aa8.94□□□□□ -0.98
RNF4-201ENST00000314289 C20orf203Q8NBC4 194 aa8.94□□□□□ -0.98
RNF4-201ENST00000314289 ZNRF2Q8NHG8 242 aa8.94□□□□□ -0.98
RNF4-201ENST00000314289 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.94□□□□□ -0.98
RNF4-201ENST00000314289 IGKV2-29A2NJV5 120 aaPredicted RBP8.94□□□□□ -0.98
RNF4-201ENST00000314289 RNF183Q96D59 192 aa8.94□□□□□ -0.98
RNF4-201ENST00000314289 IGHV3-30P01768 117 aa8.94□□□□□ -0.98
RNF4-201ENST00000314289 IGHV3-30-5P0DP03 117 aa8.94□□□□□ -0.98
RNF4-201ENST00000314289 C10orf126Q8N4M7 172 aa8.94□□□□□ -0.98
RNF4-201ENST00000314289 C9JAW5 83 aa8.93□□□□□ -0.98
RNF4-201ENST00000314289 LGALS3P17931 250 aaKnown RBP8.93□□□□□ -0.98
RNF4-201ENST00000314289 PRO1854Q9UHT4 67 aa8.93□□□□□ -0.98
RNF4-201ENST00000314289 STAB1Q9NY15 2570 aa8.92□□□□□ -0.98
RNF4-201ENST00000314289 J3QQQ9 107 aa8.92□□□□□ -0.98
RNF4-201ENST00000314289 TIMM17AQ99595 171 aa8.92□□□□□ -0.98
RNF4-201ENST00000314289 TRBV20-1A0A075B6N2 111 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 A4D1N5 150 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 GAGE7O76087 117 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 GAGE12FP0CL80 117 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 GAGE12GP0CL81 117 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 GAGE12IP0CL82 117 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 BEAN1Q3B7T3 259 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 PAPPA-AS1Q5QFB9 102 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 SLC25A29Q8N8R3 303 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 ANAPC13Q9BS18 74 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 SPXQ9BT56 116 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 Q1RN00 199 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 LINC00482Q8N8I6 264 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 TMEM141Q96I45 108 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 A0A0J9YXV3 536 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 SLC25A20O43772 301 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 RHOHQ15669 191 aa8.91□□□□□ -0.98
RNF4-201ENST00000314289 IGLV4-3A0A075B6K6 122 aa8.9□□□□□ -0.98
RNF4-201ENST00000314289 RS1O15537 224 aa8.9□□□□□ -0.99
RNF4-201ENST00000314289 TMEM263Q8WUH6 116 aaKnown RBP8.9□□□□□ -0.99
RNF4-201ENST00000314289 LINC00467Q9BRT7 94 aa8.9□□□□□ -0.99
RNF4-201ENST00000314289 VCX2Q9H322 139 aa8.9□□□□□ -0.99
RNF4-201ENST00000314289 TRGV2A0A075B6R0 118 aa8.89□□□□□ -0.99
RNF4-201ENST00000314289 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.89□□□□□ -0.99
RNF4-201ENST00000314289 FAM104AQ969W3 186 aa8.89□□□□□ -0.99
RNF4-201ENST00000314289 ERG28Q9UKR5 140 aa8.89□□□□□ -0.99
RNF4-201ENST00000314289 ZFAND6Q6FIF0 208 aa8.89□□□□□ -0.99
RNF4-201ENST00000314289 CHCHD7Q9BUK0 85 aa8.89□□□□□ -0.99
RNF4-201ENST00000314289 PKD1L1Q8TDX9 2849 aa8.88□□□□□ -0.99
RNF4-201ENST00000314289 LOC100131303A0A0U1RQF7 123 aa8.88□□□□□ -0.99
RNF4-201ENST00000314289 PLAC8L1A1L4L8 177 aa8.88□□□□□ -0.99
RNF4-201ENST00000314289 GAGE12JA6NER3 117 aa8.88□□□□□ -0.99
RNF4-201ENST00000314289 RHODO00212 210 aa8.88□□□□□ -0.99
RNF4-201ENST00000314289 MAST4O15021 2626 aa8.88□□□□□ -0.99
RNF4-201ENST00000314289 GAGE4Q13068 117 aa8.88□□□□□ -0.99
RNF4-201ENST00000314289 GAGE5Q13069 117 aa8.88□□□□□ -0.99
RNF4-201ENST00000314289 SS18L2Q9UHA2 77 aa8.88□□□□□ -0.99
RNF4-201ENST00000314289 EIF4EBP3O60516 100 aaPredicted RBP8.88□□□□□ -0.99
RNF4-201ENST00000314289 CSNK1G2-AS1Q8NCQ2 148 aa8.88□□□□□ -0.99
RNF4-201ENST00000314289 AMELXQ99217 191 aa8.88□□□□□ -0.99
RNF4-201ENST00000314289 IL17DQ8TAD2 202 aa8.87□□□□□ -0.99
RNF4-201ENST00000314289 MUSTN1Q8IVN3 82 aa8.87□□□□□ -0.99
RNF4-201ENST00000314289 SBSPONQ8IVN8 264 aa8.87□□□□□ -0.99
RNF4-201ENST00000314289 NTN5Q8WTR8 489 aaPredicted RBP8.87□□□□□ -0.99
RNF4-201ENST00000314289 IGHV3-33P01772 117 aa8.86□□□□□ -0.99
RNF4-201ENST00000314289 DEFB130BP0DP73 79 aa8.86□□□□□ -0.99
RNF4-201ENST00000314289 DEFB130AP0DP74 79 aa8.86□□□□□ -0.99
RNF4-201ENST00000314289 FBN1P35555 2871 aaKnown RBP8.86□□□□□ -0.99
RNF4-201ENST00000314289 CRLF1O75462 422 aa8.86□□□□□ -0.99
RNF4-201ENST00000314289 A8MZ25 164 aa8.85□□□□□ -0.99
RNF4-201ENST00000314289 TMEM262E9PQX1 116 aa8.85□□□□□ -0.99
RNF4-201ENST00000314289 DEFB4AO15263 64 aa8.85□□□□□ -0.99
RNF4-201ENST00000314289 LINC00694P0DN24 101 aa8.85□□□□□ -0.99
RNF4-201ENST00000314289 PIK3CD-AS1Q5SR53 167 aa8.85□□□□□ -0.99
RNF4-201ENST00000314289 TRAV8-3A0A0A6YYJ7 113 aa8.85□□□□□ -0.99
RNF4-201ENST00000314289 EDA2RQ9HAV5 297 aa8.85□□□□□ -0.99
RNF4-201ENST00000314289 UBE2D4Q9Y2X8 147 aa8.85□□□□□ -0.99
RNF4-201ENST00000314289 SNCGO76070 127 aa8.84□□□□□ -0.99
RNF4-201ENST00000314289 ZNF22P17026 224 aaPredicted RBP8.84□□□□□ -0.99
RNF4-201ENST00000314289 B5MCH6 92 aa8.84□□□□□ -0.99
RNF4-201ENST00000314289 K7EQD1 137 aa8.84□□□□□ -0.99
RNF4-201ENST00000314289 CMC4P56277 68 aaPredicted RBP8.84□□□□□ -0.99
RNF4-201ENST00000314289 NPC2P61916 151 aa8.84□□□□□ -0.99
RNF4-201ENST00000314289 C16orf74Q96GX8 76 aa8.84□□□□□ -0.99
RNF4-201ENST00000314289 TRAV4A0A0B4J268 109 aa8.84□□□□□ -0.99
RNF4-201ENST00000314289 TEX49A0A1B0GTD5 131 aa8.84□□□□□ -0.99
RNF4-201ENST00000314289 TMEM223A0PJW6 202 aa8.84□□□□□ -0.99
RNF4-201ENST00000314289 LEPROTO15243 131 aa8.84□□□□□ -0.99
RNF4-201ENST00000314289 PRSS2P07478 247 aa8.84□□□□□ -0.99
RNF4-201ENST00000314289 NTM-AS1Q6ZSK4 140 aa8.83□□□□□ -1
RNF4-201ENST00000314289 GAGE2BQ13066 116 aa8.83□□□□□ -1
RNF4-201ENST00000314289 GAGE2EQ4V326 116 aa8.83□□□□□ -1
RNF4-201ENST00000314289 DGAT2L7PQ6IED9 249 aa8.83□□□□□ -1
RNF4-201ENST00000314289 GAGE2DQ9UEU5 116 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 124.8 ms