RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 HERV-K104P63124 156 aa9.99□□□□□ -0.81
MKS1-201ENST00000313863 C4orf3Q8WVX3 66 aa9.99□□□□□ -0.81
MKS1-201ENST00000313863 Q9UF83 564 aa9.99□□□□□ -0.81
MKS1-201ENST00000313863 ITPR1Q14643 2758 aa9.99□□□□□ -0.81
MKS1-201ENST00000313863 TRBV10-1A0A0K0K1A3 114 aa9.98□□□□□ -0.81
MKS1-201ENST00000313863 FSHBP01225 129 aa9.98□□□□□ -0.81
MKS1-201ENST00000313863 Q6ZSV7 163 aa9.98□□□□□ -0.81
MKS1-201ENST00000313863 CITED2Q99967 270 aaPredicted RBP9.98□□□□□ -0.81
MKS1-201ENST00000313863 CREBBPQ92793 2442 aa9.98□□□□□ -0.81
MKS1-201ENST00000313863 IGHV3OR16-12A0A075B7B8 117 aa9.98□□□□□ -0.81
MKS1-201ENST00000313863 RPL36AP83881 106 aaKnown RBP9.98□□□□□ -0.81
MKS1-201ENST00000313863 LINC00242Q5T6M2 205 aa9.98□□□□□ -0.81
MKS1-201ENST00000313863 CFAP161Q6P656 301 aa9.98□□□□□ -0.81
MKS1-201ENST00000313863 RPL36ALQ969Q0 106 aaKnown RBP9.98□□□□□ -0.81
MKS1-201ENST00000313863 DOPEY1Q5JWR5 2465 aa9.97□□□□□ -0.81
MKS1-201ENST00000313863 DAZ2Q13117 558 aaKnown RBP9.97□□□□□ -0.81
MKS1-201ENST00000313863 DAZ4Q86SG3 579 aaKnown RBP9.97□□□□□ -0.81
MKS1-201ENST00000313863 Q8N2B8 174 aa9.97□□□□□ -0.81
MKS1-201ENST00000313863 DAND5Q8N907 189 aa9.97□□□□□ -0.81
MKS1-201ENST00000313863 DAZ3Q9NR90 486 aaKnown RBP9.97□□□□□ -0.81
MKS1-201ENST00000313863 A0A096LNT2 108 aa9.97□□□□□ -0.81
MKS1-201ENST00000313863 PRM2P04554 102 aa9.97□□□□□ -0.81
MKS1-201ENST00000313863 DEFB136Q30KP8 78 aa9.97□□□□□ -0.81
MKS1-201ENST00000313863 TRBV7-7A0A0K0K1E9 115 aa9.96□□□□□ -0.81
MKS1-201ENST00000313863 TRACP01848 142 aa9.96□□□□□ -0.81
MKS1-201ENST00000313863 COX6A2Q02221 97 aa9.96□□□□□ -0.81
MKS1-201ENST00000313863 TRAV25A0A0B4J276 109 aa9.95□□□□□ -0.82
MKS1-201ENST00000313863 SMIM1B2RUZ4 78 aa9.95□□□□□ -0.82
MKS1-201ENST00000313863 CCDC179H3BU77 68 aa9.95□□□□□ -0.82
MKS1-201ENST00000313863 DEFB114Q30KQ6 69 aa9.95□□□□□ -0.82
MKS1-201ENST00000313863 MEIG1Q5JSS6 88 aa9.95□□□□□ -0.82
MKS1-201ENST00000313863 SHISA2Q6UWI4 295 aa9.95□□□□□ -0.82
MKS1-201ENST00000313863 VPS13CQ709C8 3753 aa9.95□□□□□ -0.82
MKS1-201ENST00000313863 PRIMA1Q86XR5 153 aa9.95□□□□□ -0.82
MKS1-201ENST00000313863 IMUPQ9GZP8 106 aa9.95□□□□□ -0.82
MKS1-201ENST00000313863 K7EQD1 137 aa9.94□□□□□ -0.82
MKS1-201ENST00000313863 PF4P02776 101 aa9.94□□□□□ -0.82
MKS1-201ENST00000313863 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.94□□□□□ -0.82
MKS1-201ENST00000313863 TRGV1A0A0A0MS02 117 aa9.94□□□□□ -0.82
MKS1-201ENST00000313863 C18orf65Q6ZTR6 163 aa9.94□□□□□ -0.82
MKS1-201ENST00000313863 STHQ8IWL8 128 aa9.94□□□□□ -0.82
MKS1-201ENST00000313863 IL17DQ8TAD2 202 aa9.94□□□□□ -0.82
MKS1-201ENST00000313863 KHDC1LQ5JSQ8 128 aa9.93□□□□□ -0.82
MKS1-201ENST00000313863 ZNF625Q96I27 306 aaPredicted RBP9.93□□□□□ -0.82
MKS1-201ENST00000313863 XCL2Q9UBD3 114 aa9.92□□□□□ -0.82
MKS1-201ENST00000313863 TRAV13-2A0A0B4J235 113 aa9.92□□□□□ -0.82
MKS1-201ENST00000313863 TRAV13-1A0A0B4J241 112 aa9.92□□□□□ -0.82
MKS1-201ENST00000313863 OVOL2Q9BRP0 275 aa9.92□□□□□ -0.82
MKS1-201ENST00000313863 ANKRD17O75179 2603 aaKnown RBP9.91□□□□□ -0.82
MKS1-201ENST00000313863 MAP1AP78559 2803 aaPredicted RBP9.91□□□□□ -0.82
MKS1-201ENST00000313863 UBE2L6O14933 153 aa9.91□□□□□ -0.82
MKS1-201ENST00000313863 FAM222AQ5U5X8 452 aa9.91□□□□□ -0.82
MKS1-201ENST00000313863 CDC42SE2Q9NRR3 84 aa9.91□□□□□ -0.82
MKS1-201ENST00000313863 LINC00694P0DN24 101 aa9.91□□□□□ -0.82
MKS1-201ENST00000313863 IGHV4-31P0DP07 118 aa9.91□□□□□ -0.82
MKS1-201ENST00000313863 NRGNQ92686 78 aa9.91□□□□□ -0.82
MKS1-201ENST00000313863 F5H768 121 aa9.9□□□□□ -0.82
MKS1-201ENST00000313863 INAFM2P0DMQ5 153 aa9.9□□□□□ -0.82
MKS1-201ENST00000313863 PKD1L2Q7Z442 2459 aa9.9□□□□□ -0.82
MKS1-201ENST00000313863 A0A0U1RRA0 63 aa9.89□□□□□ -0.83
MKS1-201ENST00000313863 SOSTDC1Q6X4U4 206 aa9.89□□□□□ -0.83
MKS1-201ENST00000313863 LINC00643Q86TS7 51 aa9.89□□□□□ -0.83
MKS1-201ENST00000313863 C1orf158Q8N1D5 194 aa9.89□□□□□ -0.83
MKS1-201ENST00000313863 TMEM243Q9BU79 118 aa9.89□□□□□ -0.83
MKS1-201ENST00000313863 COL12A1Q99715 3063 aa9.89□□□□□ -0.83
MKS1-201ENST00000313863 BAALC-AS2P0C853 105 aa9.89□□□□□ -0.83
MKS1-201ENST00000313863 CMC4P56277 68 aaPredicted RBP9.89□□□□□ -0.83
MKS1-201ENST00000313863 ODF3L2Q3SX64 289 aa9.89□□□□□ -0.83
MKS1-201ENST00000313863 HIST2H2BCQ6DN03 193 aa9.88□□□□□ -0.83
MKS1-201ENST00000313863 HIST2H2BDQ6DRA6 164 aa9.88□□□□□ -0.83
MKS1-201ENST00000313863 NTM-AS1Q6ZSK4 140 aa9.88□□□□□ -0.83
MKS1-201ENST00000313863 MAPK1IP1LQ8NDC0 245 aa9.88□□□□□ -0.83
MKS1-201ENST00000313863 TMEM126AQ9H061 195 aa9.88□□□□□ -0.83
MKS1-201ENST00000313863 CELSR2Q9HCU4 2923 aa9.88□□□□□ -0.83
MKS1-201ENST00000313863 CRPP02741 224 aa9.87□□□□□ -0.83
MKS1-201ENST00000313863 USP9XQ93008 2570 aaPredicted RBP9.87□□□□□ -0.83
MKS1-201ENST00000313863 CR1P17927 2039 aa9.87□□□□□ -0.83
MKS1-201ENST00000313863 RPL28P46779 137 aaKnown RBP9.87□□□□□ -0.83
MKS1-201ENST00000313863 USP9YO00507 2555 aaPredicted RBP9.87□□□□□ -0.83
MKS1-201ENST00000313863 CRYBG3Q68DQ2 2970 aa9.86□□□□□ -0.83
MKS1-201ENST00000313863 SMIM20Q8N5G0 67 aa9.86□□□□□ -0.83
MKS1-201ENST00000313863 TMEM86BQ8N661 226 aa9.86□□□□□ -0.83
MKS1-201ENST00000313863 CFAP46Q8IYW2 2715 aa9.86□□□□□ -0.83
MKS1-201ENST00000313863 NDUFA7O95182 113 aa9.86□□□□□ -0.83
MKS1-201ENST00000313863 ATP5G1P05496 136 aa9.86□□□□□ -0.83
MKS1-201ENST00000313863 Q6ZTI0 123 aa9.86□□□□□ -0.83
MKS1-201ENST00000313863 COX7B2Q8TF08 81 aa9.86□□□□□ -0.83
MKS1-201ENST00000313863 FLNCQ14315 2725 aa9.85□□□□□ -0.83
MKS1-201ENST00000313863 CXCL5P42830 114 aa9.84□□□□□ -0.83
MKS1-201ENST00000313863 SDIM1Q6ZPB5 146 aa9.84□□□□□ -0.83
MKS1-201ENST00000313863 C16orf74Q96GX8 76 aa9.84□□□□□ -0.83
MKS1-201ENST00000313863 TRBV6-4A0A1B0GX49 114 aa9.83□□□□□ -0.84
MKS1-201ENST00000313863 H0YGX0 51 aa9.83□□□□□ -0.84
MKS1-201ENST00000313863 DNAL4O96015 105 aa9.83□□□□□ -0.84
MKS1-201ENST00000313863 MALP21145 153 aa9.83□□□□□ -0.84
MKS1-201ENST00000313863 CHCHD5Q9BSY4 110 aa9.83□□□□□ -0.84
MKS1-201ENST00000313863 FAM236AA0A1B0GUQ0 79 aa9.82□□□□□ -0.84
MKS1-201ENST00000313863 FAM236BA0A1B0GV22 79 aa9.82□□□□□ -0.84
MKS1-201ENST00000313863 SND1-IT1Q9HBX3 110 aa9.82□□□□□ -0.84
MKS1-201ENST00000313863 NOP10Q9NPE3 64 aaKnown RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 100.7 ms