RNA–Protein interactions for RNA: ENST00000312481.11

COL6A5-202, Transcript of collagen type VI alpha 5 chain, humanhuman

TSL 1 (best)

Gene COL6A5, Length 9,226 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A5-202ENST00000312481 KLK9Q2XQG4 91 aa6.62□□□□□ -1.35
COL6A5-202ENST00000312481 Q96MF0 132 aa6.62□□□□□ -1.35
COL6A5-202ENST00000312481 CAMK2N2Q96S95 79 aa6.62□□□□□ -1.35
COL6A5-202ENST00000312481 C20orf173Q96LM9 149 aa6.62□□□□□ -1.35
COL6A5-202ENST00000312481 UPK3BQ9BT76 320 aa6.61□□□□□ -1.35
COL6A5-202ENST00000312481 RPL35AP18077 110 aaKnown RBP6.61□□□□□ -1.35
COL6A5-202ENST00000312481 CD164L2Q6UWJ8 174 aa6.61□□□□□ -1.35
COL6A5-202ENST00000312481 RS1O15537 224 aa6.61□□□□□ -1.35
COL6A5-202ENST00000312481 WISP2O76076 250 aa6.61□□□□□ -1.35
COL6A5-202ENST00000312481 LOC107984640A0A0U1RRK4 108 aa6.61□□□□□ -1.35
COL6A5-202ENST00000312481 DIAPH2-AS1Q14236 149 aa6.61□□□□□ -1.35
COL6A5-202ENST00000312481 ZNF625Q96I27 306 aaPredicted RBP6.61□□□□□ -1.35
COL6A5-202ENST00000312481 TRAV7A0A075B6U4 112 aa6.61□□□□□ -1.35
COL6A5-202ENST00000312481 TRBV7-6A0A0J9YX20 115 aa6.61□□□□□ -1.35
COL6A5-202ENST00000312481 SPAG11BQ08648 103 aa6.61□□□□□ -1.35
COL6A5-202ENST00000312481 TRBV7-7A0A0K0K1E9 115 aa6.61□□□□□ -1.35
COL6A5-202ENST00000312481 LINC00474Q9P2X8 69 aa6.61□□□□□ -1.35
COL6A5-202ENST00000312481 BLCAPP62952 87 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 CFHR3Q02985 330 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 C11orf71Q6IPW1 123 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 MIR7-3HGQ8N6C7 128 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 TRAV12-2A0A075B6T6 113 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 IGIPA6NJ69 53 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 LINC00526Q96FQ7 95 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 A0A1B0GUV1 79 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 IGLV1-40P01703 118 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 LECT2O14960 151 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 TRIAP1O43715 76 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 XCL1P47992 114 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 SERP1Q9Y6X1 66 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 LMO4P61968 165 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 BPY2O14599 106 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 POM121L12Q8N7R1 296 aa6.6□□□□□ -1.35
COL6A5-202ENST00000312481 SELENOKQ9Y6D0 94 aa6.59□□□□□ -1.35
COL6A5-202ENST00000312481 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.59□□□□□ -1.35
COL6A5-202ENST00000312481 IGKV2-29A2NJV5 120 aaPredicted RBP6.59□□□□□ -1.35
COL6A5-202ENST00000312481 MRPS12O15235 138 aaKnown RBP6.59□□□□□ -1.35
COL6A5-202ENST00000312481 CXCL6P80162 114 aa6.59□□□□□ -1.35
COL6A5-202ENST00000312481 ZNF706Q9Y5V0 76 aaPredicted RBP6.59□□□□□ -1.35
COL6A5-202ENST00000312481 FAM19A3Q7Z5A8 133 aa6.59□□□□□ -1.35
COL6A5-202ENST00000312481 A0A087WZ39 114 aa6.59□□□□□ -1.35
COL6A5-202ENST00000312481 CLPSL1A2RUU4 121 aa6.59□□□□□ -1.35
COL6A5-202ENST00000312481 E7EUB6 86 aa6.59□□□□□ -1.35
COL6A5-202ENST00000312481 TEX49A0A1B0GTD5 131 aa6.59□□□□□ -1.35
COL6A5-202ENST00000312481 SMIM26A0A096LP01 95 aa6.58□□□□□ -1.36
COL6A5-202ENST00000312481 TRBV6-8A0A0A6YYG3 113 aa6.58□□□□□ -1.36
COL6A5-202ENST00000312481 RPL39P62891 51 aaKnown RBP6.58□□□□□ -1.36
COL6A5-202ENST00000312481 RUSC1-AS1Q66K80 236 aa6.58□□□□□ -1.36
COL6A5-202ENST00000312481 AMELXQ99217 191 aa6.58□□□□□ -1.36
COL6A5-202ENST00000312481 USP24Q9UPU5 2620 aa6.58□□□□□ -1.36
COL6A5-202ENST00000312481 RPL37AP8A6NKH3 93 aa6.58□□□□□ -1.36
COL6A5-202ENST00000312481 MAP6D1Q9H9H5 199 aa6.58□□□□□ -1.36
COL6A5-202ENST00000312481 DEFB112Q30KQ8 113 aa6.58□□□□□ -1.36
COL6A5-202ENST00000312481 LINC00322Q6ZN03 302 aaPredicted RBP6.58□□□□□ -1.36
COL6A5-202ENST00000312481 MSRB1Q9NZV6 116 aa6.58□□□□□ -1.36
COL6A5-202ENST00000312481 IGFL4Q6B9Z1 124 aa6.58□□□□□ -1.36
COL6A5-202ENST00000312481 Q6YL49 198 aa6.58□□□□□ -1.36
COL6A5-202ENST00000312481 Q8N976 141 aa6.58□□□□□ -1.36
COL6A5-202ENST00000312481 CRIP1P50238 77 aa6.57□□□□□ -1.36
COL6A5-202ENST00000312481 SEC61GP60059 68 aa6.57□□□□□ -1.36
COL6A5-202ENST00000312481 UBE2AP49459 152 aa6.57□□□□□ -1.36
COL6A5-202ENST00000312481 C3orf56Q8N813 242 aa6.57□□□□□ -1.36
COL6A5-202ENST00000312481 TSHBP01222 138 aa6.56□□□□□ -1.36
COL6A5-202ENST00000312481 RNF223E7ERA6 249 aa6.56□□□□□ -1.36
COL6A5-202ENST00000312481 BEAN1Q3B7T3 259 aa6.56□□□□□ -1.36
COL6A5-202ENST00000312481 DCANP1Q8TF63 244 aa6.56□□□□□ -1.36
COL6A5-202ENST00000312481 K7ERS5 55 aa6.56□□□□□ -1.36
COL6A5-202ENST00000312481 IGHV4-59P01825 116 aa6.56□□□□□ -1.36
COL6A5-202ENST00000312481 B9D2Q9BPU9 175 aa6.56□□□□□ -1.36
COL6A5-202ENST00000312481 GATA1P15976 413 aaPredicted RBP6.56□□□□□ -1.36
COL6A5-202ENST00000312481 NDUFS5O43920 106 aa6.55□□□□□ -1.36
COL6A5-202ENST00000312481 RITA1Q96K30 269 aa6.55□□□□□ -1.36
COL6A5-202ENST00000312481 RNASE3P12724 160 aaKnown RBP6.55□□□□□ -1.36
COL6A5-202ENST00000312481 DEFB114Q30KQ6 69 aa6.55□□□□□ -1.36
COL6A5-202ENST00000312481 IGHV4-61A0A0C4DH41 118 aa6.55□□□□□ -1.36
COL6A5-202ENST00000312481 PRAC2D3DTV9 90 aa6.55□□□□□ -1.36
COL6A5-202ENST00000312481 UBE2D4Q9Y2X8 147 aa6.55□□□□□ -1.36
COL6A5-202ENST00000312481 LINC00310P59036 64 aa6.54□□□□□ -1.36
COL6A5-202ENST00000312481 CHKB-CPT1BH3BT56 60 aa6.54□□□□□ -1.36
COL6A5-202ENST00000312481 MT-ATP8P03928 68 aa6.54□□□□□ -1.36
COL6A5-202ENST00000312481 M0R378 163 aa6.54□□□□□ -1.36
COL6A5-202ENST00000312481 CCKP06307 115 aa6.54□□□□□ -1.36
COL6A5-202ENST00000312481 LELP1Q5T871 98 aa6.54□□□□□ -1.36
COL6A5-202ENST00000312481 KLK5Q9Y337 293 aaPredicted RBP6.53□□□□□ -1.36
COL6A5-202ENST00000312481 Q8NA96 180 aa6.53□□□□□ -1.36
COL6A5-202ENST00000312481 ZFP36P26651 326 aaKnown RBP6.53□□□□□ -1.36
COL6A5-202ENST00000312481 IGLV2-18A0A075B6J9 118 aa6.52□□□□□ -1.36
COL6A5-202ENST00000312481 PRB3Q04118 309 aaPredicted RBP6.52□□□□□ -1.37
COL6A5-202ENST00000312481 CDKN2A-AS1Q9UH64 79 aa6.52□□□□□ -1.37
COL6A5-202ENST00000312481 EPG5Q9HCE0 2579 aa6.52□□□□□ -1.37
COL6A5-202ENST00000312481 USP17L23D6RBM5 183 aa6.52□□□□□ -1.37
COL6A5-202ENST00000312481 REG3AQ06141 175 aa6.52□□□□□ -1.37
COL6A5-202ENST00000312481 IGLV5-45A0A087WSX0 123 aa6.52□□□□□ -1.37
COL6A5-202ENST00000312481 TRAV23DV6A0A075B6W5 121 aa6.52□□□□□ -1.37
COL6A5-202ENST00000312481 H3BPC8 53 aa6.52□□□□□ -1.37
COL6A5-202ENST00000312481 CRYGDP07320 174 aa6.52□□□□□ -1.37
COL6A5-202ENST00000312481 UNQ9165/PRO28630Q6UXU0 137 aa6.51□□□□□ -1.37
COL6A5-202ENST00000312481 CLEC2BQ92478 149 aa6.51□□□□□ -1.37
COL6A5-202ENST00000312481 BRK1Q8WUW1 75 aa6.51□□□□□ -1.37
COL6A5-202ENST00000312481 PRR31Q5SQ13 230 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms