RNA–Protein interactions for RNA: ENST00000311626.8

HOXB3-201, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 2,642 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-201ENST00000311626 STHQ8IWL8 128 aa18.25■□□□□ 0.51
HOXB3-201ENST00000311626 ACANP16112 2415 aa18.25■□□□□ 0.51
HOXB3-201ENST00000311626 A0A0B4J2C4 111 aa18.24■□□□□ 0.51
HOXB3-201ENST00000311626 RS1O15537 224 aa18.24■□□□□ 0.51
HOXB3-201ENST00000311626 ATP6V0E2Q8NHE4 81 aa18.24■□□□□ 0.51
HOXB3-201ENST00000311626 SPANXA1Q9NS26 97 aa18.24■□□□□ 0.51
HOXB3-201ENST00000311626 WFDC11Q8NEX6 87 aa18.24■□□□□ 0.51
HOXB3-201ENST00000311626 LINC00694P0DN24 101 aa18.23■□□□□ 0.51
HOXB3-201ENST00000311626 BEAN1Q3B7T3 259 aa18.23■□□□□ 0.51
HOXB3-201ENST00000311626 SETXQ7Z333 2677 aaKnown RBP18.23■□□□□ 0.51
HOXB3-201ENST00000311626 DGAT2L7PQ6IED9 249 aa18.23■□□□□ 0.51
HOXB3-201ENST00000311626 A0A0U1RRA0 63 aa18.22■□□□□ 0.51
HOXB3-201ENST00000311626 SLC25A20O43772 301 aa18.22■□□□□ 0.51
HOXB3-201ENST00000311626 PPDPFLQ8WWR9 84 aa18.22■□□□□ 0.51
HOXB3-201ENST00000311626 Q6ZTI0 123 aa18.22■□□□□ 0.51
HOXB3-201ENST00000311626 ZNF625Q96I27 306 aaPredicted RBP18.22■□□□□ 0.51
HOXB3-201ENST00000311626 DNAJC9-AS1A6NH13 148 aa18.21■□□□□ 0.51
HOXB3-201ENST00000311626 TRIAP1O43715 76 aa18.21■□□□□ 0.51
HOXB3-201ENST00000311626 TRAV16A0A0A6YYK6 109 aaPredicted RBP18.2■□□□□ 0.5
HOXB3-201ENST00000311626 SBSPONQ8IVN8 264 aa18.2■□□□□ 0.5
HOXB3-201ENST00000311626 WFDC10AQ9H1F0 79 aa18.2■□□□□ 0.5
HOXB3-201ENST00000311626 ESM1Q9NQ30 184 aa18.2■□□□□ 0.5
HOXB3-201ENST00000311626 MT-ATP8P03928 68 aa18.2■□□□□ 0.5
HOXB3-201ENST00000311626 MTORP42345 2549 aa18.19■□□□□ 0.5
HOXB3-201ENST00000311626 CRYBA4P53673 196 aa18.19■□□□□ 0.5
HOXB3-201ENST00000311626 CCL24O00175 119 aa18.18■□□□□ 0.5
HOXB3-201ENST00000311626 PIK3CD-AS1Q5SR53 167 aa18.18■□□□□ 0.5
HOXB3-201ENST00000311626 TMEM101Q96IK0 257 aa18.18■□□□□ 0.5
HOXB3-201ENST00000311626 DNAJC30Q96LL9 226 aa18.17■□□□□ 0.5
HOXB3-201ENST00000311626 XGP55808 180 aa18.17■□□□□ 0.5
HOXB3-201ENST00000311626 CITED2Q99967 270 aaPredicted RBP18.17■□□□□ 0.5
HOXB3-201ENST00000311626 TRAV13-1A0A0B4J241 112 aa18.16■□□□□ 0.5
HOXB3-201ENST00000311626 PLA2G2AP14555 144 aa18.16■□□□□ 0.5
HOXB3-201ENST00000311626 GAGE12JA6NER3 117 aa18.16■□□□□ 0.5
HOXB3-201ENST00000311626 GAGE4Q13068 117 aa18.16■□□□□ 0.5
HOXB3-201ENST00000311626 GAGE5Q13069 117 aa18.16■□□□□ 0.5
HOXB3-201ENST00000311626 MIAQ16674 131 aa18.16■□□□□ 0.5
HOXB3-201ENST00000311626 NTM-AS1Q6ZSK4 140 aa18.15■□□□□ 0.5
HOXB3-201ENST00000311626 CIDEAO60543 219 aa18.14■□□□□ 0.49
HOXB3-201ENST00000311626 ZFAND6Q6FIF0 208 aa18.14■□□□□ 0.49
HOXB3-201ENST00000311626 NOP10Q9NPE3 64 aaKnown RBP18.14■□□□□ 0.49
HOXB3-201ENST00000311626 SPANXDQ9BXN6 97 aa18.14■□□□□ 0.49
HOXB3-201ENST00000311626 SPANXCQ9NY87 97 aa18.14■□□□□ 0.49
HOXB3-201ENST00000311626 LINC01620Q4KN68 170 aa18.13■□□□□ 0.49
HOXB3-201ENST00000311626 NTN5Q8WTR8 489 aaPredicted RBP18.13■□□□□ 0.49
HOXB3-201ENST00000311626 CLEC2BQ92478 149 aa18.13■□□□□ 0.49
HOXB3-201ENST00000311626 LINC00242Q5T6M2 205 aa18.12■□□□□ 0.49
HOXB3-201ENST00000311626 LRRC75A-AS1Q8N1F1 130 aa18.12■□□□□ 0.49
HOXB3-201ENST00000311626 ICOSQ9Y6W8 199 aa18.12■□□□□ 0.49
HOXB3-201ENST00000311626 SCGB1A1P11684 91 aa18.12■□□□□ 0.49
HOXB3-201ENST00000311626 RPL35AP18077 110 aaKnown RBP18.12■□□□□ 0.49
HOXB3-201ENST00000311626 ATXN8Q156A1 80 aa18.12■□□□□ 0.49
HOXB3-201ENST00000311626 Q9H8V8 135 aa18.1■□□□□ 0.49
HOXB3-201ENST00000311626 LOC100131303A0A0U1RQF7 123 aa18.1■□□□□ 0.49
HOXB3-201ENST00000311626 TRBV30A0A0K0K1B3 111 aa18.09■□□□□ 0.49
HOXB3-201ENST00000311626 K7EQD1 137 aa18.08■□□□□ 0.49
HOXB3-201ENST00000311626 IL17DQ8TAD2 202 aa18.08■□□□□ 0.49
HOXB3-201ENST00000311626 TEX49A0A1B0GTD5 131 aa18.08■□□□□ 0.48
HOXB3-201ENST00000311626 RPL13AP40429 203 aaKnown RBP18.08■□□□□ 0.48
HOXB3-201ENST00000311626 RPL36AP83881 106 aaKnown RBP18.08■□□□□ 0.48
HOXB3-201ENST00000311626 RPL36ALQ969Q0 106 aaKnown RBP18.08■□□□□ 0.48
HOXB3-201ENST00000311626 TENM4Q6N022 2769 aa18.07■□□□□ 0.48
HOXB3-201ENST00000311626 TIRAPP58753 221 aa18.07■□□□□ 0.48
HOXB3-201ENST00000311626 GAGE7O76087 117 aa18.07■□□□□ 0.48
HOXB3-201ENST00000311626 GIG44P09565 113 aaPredicted RBP18.07■□□□□ 0.48
HOXB3-201ENST00000311626 GAGE12FP0CL80 117 aa18.07■□□□□ 0.48
HOXB3-201ENST00000311626 GAGE12GP0CL81 117 aa18.07■□□□□ 0.48
HOXB3-201ENST00000311626 GAGE12IP0CL82 117 aa18.07■□□□□ 0.48
HOXB3-201ENST00000311626 NDUFA1O15239 70 aa18.05■□□□□ 0.48
HOXB3-201ENST00000311626 IGLV5-45A0A087WSX0 123 aa18.05■□□□□ 0.48
HOXB3-201ENST00000311626 TRAV25A0A0B4J276 109 aa18.04■□□□□ 0.48
HOXB3-201ENST00000311626 IGKV3OR2-268A0A0C4DH90 116 aa18.03■□□□□ 0.48
HOXB3-201ENST00000311626 TMEM86BQ8N661 226 aa18.03■□□□□ 0.48
HOXB3-201ENST00000311626 SMIM1B2RUZ4 78 aa18.02■□□□□ 0.48
HOXB3-201ENST00000311626 CKS1BP61024 79 aa18.02■□□□□ 0.48
HOXB3-201ENST00000311626 HERVK_113P63121 156 aa18.02■□□□□ 0.48
HOXB3-201ENST00000311626 TRGV2A0A075B6R0 118 aa18.02■□□□□ 0.47
HOXB3-201ENST00000311626 H7C423 109 aa18.01■□□□□ 0.47
HOXB3-201ENST00000311626 LINC01006Q8NI28 216 aa18.01■□□□□ 0.47
HOXB3-201ENST00000311626 CLUHP3Q96NS8 147 aa18.01■□□□□ 0.47
HOXB3-201ENST00000311626 TRBV10-2A0A0K0K1G8 114 aa18.01■□□□□ 0.47
HOXB3-201ENST00000311626 SOSTDC1Q6X4U4 206 aa18.01■□□□□ 0.47
HOXB3-201ENST00000311626 LINC00308Q8TCZ7 52 aa18.01■□□□□ 0.47
HOXB3-201ENST00000311626 YAE1D1Q9NRH1 226 aa18.01■□□□□ 0.47
HOXB3-201ENST00000311626 TRAV4A0A0B4J268 109 aa18■□□□□ 0.47
HOXB3-201ENST00000311626 C2orf82Q6UX34 121 aa18■□□□□ 0.47
HOXB3-201ENST00000311626 FN1P02751 2386 aaKnown RBP18■□□□□ 0.47
HOXB3-201ENST00000311626 IGLV5-39A0A0G2JS06 123 aa18■□□□□ 0.47
HOXB3-201ENST00000311626 CDC42SE2Q9NRR3 84 aa18■□□□□ 0.47
HOXB3-201ENST00000311626 ITPR2Q14571 2701 aa17.98■□□□□ 0.47
HOXB3-201ENST00000311626 PLAC8L1A1L4L8 177 aa17.98■□□□□ 0.47
HOXB3-201ENST00000311626 PRIMA1Q86XR5 153 aa17.98■□□□□ 0.47
HOXB3-201ENST00000311626 DAZ2Q13117 558 aaKnown RBP17.98■□□□□ 0.47
HOXB3-201ENST00000311626 CIRBPQ14011 172 aaKnown RBP17.98■□□□□ 0.47
HOXB3-201ENST00000311626 MEIG1Q5JSS6 88 aa17.98■□□□□ 0.47
HOXB3-201ENST00000311626 DAZ4Q86SG3 579 aaKnown RBP17.98■□□□□ 0.47
HOXB3-201ENST00000311626 DAZ3Q9NR90 486 aaKnown RBP17.98■□□□□ 0.47
HOXB3-201ENST00000311626 COX6CP09669 75 aa17.97■□□□□ 0.47
HOXB3-201ENST00000311626 TIMM17BO60830 172 aa17.97■□□□□ 0.47
HOXB3-201ENST00000311626 TRBV10-1A0A0K0K1A3 114 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms