RNA–Protein interactions for RNA: ENST00000311350.7

HERPUD2-201, Transcript of HERPUD family member 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HERPUD2, Length 2,474 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-201ENST00000311350 TMEM89A2RUT3 159 aa13.84□□□□□ -0.19
HERPUD2-201ENST00000311350 RNF152Q8N8N0 203 aa13.84□□□□□ -0.19
HERPUD2-201ENST00000311350 HIVEP2P31629 2446 aa13.84□□□□□ -0.19
HERPUD2-201ENST00000311350 A0A0J9YX75 114 aa13.84□□□□□ -0.19
HERPUD2-201ENST00000311350 M0QY20 66 aa13.84□□□□□ -0.19
HERPUD2-201ENST00000311350 BLCAPP62952 87 aa13.84□□□□□ -0.19
HERPUD2-201ENST00000311350 MRPL23Q16540 153 aaKnown RBP13.84□□□□□ -0.19
HERPUD2-201ENST00000311350 FN1P02751 2386 aaKnown RBP13.83□□□□□ -0.19
HERPUD2-201ENST00000311350 TRBV7-7A0A0K0K1E9 115 aa13.83□□□□□ -0.2
HERPUD2-201ENST00000311350 INAFM1C9JVW0 142 aa13.83□□□□□ -0.2
HERPUD2-201ENST00000311350 DAND5Q8N907 189 aa13.83□□□□□ -0.2
HERPUD2-201ENST00000311350 C20orf203Q8NBC4 194 aa13.83□□□□□ -0.2
HERPUD2-201ENST00000311350 LST1O00453 97 aa13.83□□□□□ -0.2
HERPUD2-201ENST00000311350 EDN2P20800 178 aa13.83□□□□□ -0.2
HERPUD2-201ENST00000311350 TIMM21Q9BVV7 248 aa13.83□□□□□ -0.2
HERPUD2-201ENST00000311350 LINC00694P0DN24 101 aa13.82□□□□□ -0.2
HERPUD2-201ENST00000311350 KRTAP21-3Q3LHN1 58 aa13.82□□□□□ -0.2
HERPUD2-201ENST00000311350 DEFB121Q5J5C9 76 aa13.82□□□□□ -0.2
HERPUD2-201ENST00000311350 COX6CP09669 75 aa13.81□□□□□ -0.2
HERPUD2-201ENST00000311350 SMCR5Q8TEV8 140 aa13.81□□□□□ -0.2
HERPUD2-201ENST00000311350 FAM104AQ969W3 186 aa13.81□□□□□ -0.2
HERPUD2-201ENST00000311350 DUX5Q96PT3 197 aa13.81□□□□□ -0.2
HERPUD2-201ENST00000311350 CR1P17927 2039 aa13.81□□□□□ -0.2
HERPUD2-201ENST00000311350 TMEM126AQ9H061 195 aa13.81□□□□□ -0.2
HERPUD2-201ENST00000311350 EDA2RQ9HAV5 297 aa13.81□□□□□ -0.2
HERPUD2-201ENST00000311350 LOC107984640A0A0U1RRK4 108 aa13.8□□□□□ -0.2
HERPUD2-201ENST00000311350 FAM240AA0A1B0GVK7 77 aa13.8□□□□□ -0.2
HERPUD2-201ENST00000311350 PSMB8P28062 276 aa13.8□□□□□ -0.2
HERPUD2-201ENST00000311350 NDUFA12Q9UI09 145 aa13.8□□□□□ -0.2
HERPUD2-201ENST00000311350 SNRPD3P62318 126 aaKnown RBP13.8□□□□□ -0.2
HERPUD2-201ENST00000311350 YAE1D1Q9NRH1 226 aa13.8□□□□□ -0.2
HERPUD2-201ENST00000311350 TRAV12-2A0A075B6T6 113 aa13.79□□□□□ -0.2
HERPUD2-201ENST00000311350 IGHV1OR15-1A0A075B7D0 117 aa13.79□□□□□ -0.2
HERPUD2-201ENST00000311350 IGKV3-20P01619 116 aa13.79□□□□□ -0.2
HERPUD2-201ENST00000311350 MSMBP08118 114 aa13.79□□□□□ -0.2
HERPUD2-201ENST00000311350 TMEM101Q96IK0 257 aa13.79□□□□□ -0.2
HERPUD2-201ENST00000311350 KLK5Q9Y337 293 aaPredicted RBP13.79□□□□□ -0.2
HERPUD2-201ENST00000311350 SPANXA1Q9NS26 97 aa13.79□□□□□ -0.2
HERPUD2-201ENST00000311350 K7EQG2 157 aa13.78□□□□□ -0.2
HERPUD2-201ENST00000311350 MIAQ16674 131 aa13.78□□□□□ -0.2
HERPUD2-201ENST00000311350 TMEM61Q8N0U2 210 aa13.78□□□□□ -0.2
HERPUD2-201ENST00000311350 IGHV4-31P0DP07 118 aa13.77□□□□□ -0.21
HERPUD2-201ENST00000311350 SPANXDQ9BXN6 97 aa13.77□□□□□ -0.21
HERPUD2-201ENST00000311350 SPANXCQ9NY87 97 aa13.77□□□□□ -0.21
HERPUD2-201ENST00000311350 CD28P10747 220 aa13.76□□□□□ -0.21
HERPUD2-201ENST00000311350 C9orf153Q5TBE3 101 aa13.75□□□□□ -0.21
HERPUD2-201ENST00000311350 IGHV1-58A0A0C4DH39 117 aa13.75□□□□□ -0.21
HERPUD2-201ENST00000311350 ANK3Q12955 4377 aaKnown RBP13.75□□□□□ -0.21
HERPUD2-201ENST00000311350 SONP18583 2426 aaKnown RBP13.75□□□□□ -0.21
HERPUD2-201ENST00000311350 ABCA2Q9BZC7 2435 aa13.75□□□□□ -0.21
HERPUD2-201ENST00000311350 IGHV3-73A0A0B4J1V6 119 aa13.74□□□□□ -0.21
HERPUD2-201ENST00000311350 PYGO1Q9Y3Y4 419 aa13.74□□□□□ -0.21
HERPUD2-201ENST00000311350 MRPS36P82909 103 aaKnown RBP13.73□□□□□ -0.21
HERPUD2-201ENST00000311350 CITED2Q99967 270 aaPredicted RBP13.73□□□□□ -0.21
HERPUD2-201ENST00000311350 PROK1P58294 105 aa13.73□□□□□ -0.21
HERPUD2-201ENST00000311350 C3orf22Q8N5N4 141 aa13.73□□□□□ -0.21
HERPUD2-201ENST00000311350 PRIMA1Q86XR5 153 aa13.72□□□□□ -0.21
HERPUD2-201ENST00000311350 VSIG2Q96IQ7 327 aa13.72□□□□□ -0.21
HERPUD2-201ENST00000311350 Q9UF83 564 aa13.72□□□□□ -0.21
HERPUD2-201ENST00000311350 B4DSR2 109 aa13.72□□□□□ -0.21
HERPUD2-201ENST00000311350 NDUFA7O95182 113 aa13.72□□□□□ -0.21
HERPUD2-201ENST00000311350 JMJD1CQ15652 2540 aa13.72□□□□□ -0.21
HERPUD2-201ENST00000311350 A0A0U1RRA0 63 aa13.71□□□□□ -0.21
HERPUD2-201ENST00000311350 HERVK_113P63121 156 aa13.71□□□□□ -0.21
HERPUD2-201ENST00000311350 CSDC2Q9Y534 153 aaKnown RBP13.71□□□□□ -0.21
HERPUD2-201ENST00000311350 PIK3CD-AS1Q5SR53 167 aa13.7□□□□□ -0.22
HERPUD2-201ENST00000311350 DNAJC30Q96LL9 226 aa13.69□□□□□ -0.22
HERPUD2-201ENST00000311350 SORL1Q92673 2214 aa13.69□□□□□ -0.22
HERPUD2-201ENST00000311350 A8MTW9 85 aa13.68□□□□□ -0.22
HERPUD2-201ENST00000311350 SPINK13Q1W4C9 94 aa13.68□□□□□ -0.22
HERPUD2-201ENST00000311350 Q8N2B8 174 aa13.68□□□□□ -0.22
HERPUD2-201ENST00000311350 LINC01356Q8N9X3 169 aa13.68□□□□□ -0.22
HERPUD2-201ENST00000311350 ZNF625Q96I27 306 aaPredicted RBP13.68□□□□□ -0.22
HERPUD2-201ENST00000311350 AVPP01185 164 aa13.67□□□□□ -0.22
HERPUD2-201ENST00000311350 IMUPQ9GZP8 106 aa13.67□□□□□ -0.22
HERPUD2-201ENST00000311350 DAZ2Q13117 558 aaKnown RBP13.67□□□□□ -0.22
HERPUD2-201ENST00000311350 DAZ4Q86SG3 579 aaKnown RBP13.67□□□□□ -0.22
HERPUD2-201ENST00000311350 DAZ3Q9NR90 486 aaKnown RBP13.67□□□□□ -0.22
HERPUD2-201ENST00000311350 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.65□□□□□ -0.22
HERPUD2-201ENST00000311350 IGKV2-29A2NJV5 120 aaPredicted RBP13.65□□□□□ -0.22
HERPUD2-201ENST00000311350 UQCRQO14949 82 aa13.65□□□□□ -0.22
HERPUD2-201ENST00000311350 LINC00643Q86TS7 51 aa13.65□□□□□ -0.22
HERPUD2-201ENST00000311350 HTN1P15515 57 aa13.65□□□□□ -0.22
HERPUD2-201ENST00000311350 LINC00526Q96FQ7 95 aa13.65□□□□□ -0.22
HERPUD2-201ENST00000311350 C22orf24Q9Y442 160 aa13.65□□□□□ -0.22
HERPUD2-201ENST00000311350 IGHV4-59P01825 116 aa13.64□□□□□ -0.23
HERPUD2-201ENST00000311350 PRM2P04554 102 aa13.64□□□□□ -0.23
HERPUD2-201ENST00000311350 ACYP1P07311 99 aa13.64□□□□□ -0.23
HERPUD2-201ENST00000311350 DEFB112Q30KQ8 113 aa13.64□□□□□ -0.23
HERPUD2-201ENST00000311350 J3QLI3 93 aa13.64□□□□□ -0.23
HERPUD2-201ENST00000311350 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.64□□□□□ -0.23
HERPUD2-201ENST00000311350 CDKN2A-AS1Q9UH64 79 aa13.64□□□□□ -0.23
HERPUD2-201ENST00000311350 CUBNO60494 3623 aa13.63□□□□□ -0.23
HERPUD2-201ENST00000311350 TINCRA0A1B0GVN0 87 aa13.63□□□□□ -0.23
HERPUD2-201ENST00000311350 KNCNA6PVL3 124 aa13.63□□□□□ -0.23
HERPUD2-201ENST00000311350 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.63□□□□□ -0.234e-6■■□□□ 13.3
HERPUD2-201ENST00000311350 SYNJ2BPP57105 145 aa13.63□□□□□ -0.23
HERPUD2-201ENST00000311350 CYSTM1Q9H1C7 97 aa13.63□□□□□ -0.23
HERPUD2-201ENST00000311350 UBE2E2Q96LR5 201 aa13.62□□□□□ -0.23
HERPUD2-201ENST00000311350 COX7A2LO14548 114 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 71.4 ms