RNA–Protein interactions for RNA: ENST00000309041.11

CEP290-201, Transcript of centrosomal protein 290, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CEP290, Length 7,616 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEP290-201ENST00000309041 KRTAP4-4Q9BYR3 166 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 TMEM167BQ9NRX6 74 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 F5P12259 2224 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 ROS1P08922 2347 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 SONP18583 2426 aaKnown RBP0.73□□□□□ -2.29
CEP290-201ENST00000309041 CUL9Q8IWT3 2517 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 MKI67P46013 3256 aaKnown RBP0.73□□□□□ -2.29
CEP290-201ENST00000309041 C2orf73Q8N5S3 287 aaPredicted RBP0.73□□□□□ -2.29
CEP290-201ENST00000309041 TMEM86BQ8N661 226 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 SERP2Q8N6R1 65 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 SVEP1Q4LDE5 3571 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 AQP12BA6NM10 295 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 FABP1P07148 127 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 SS18Q15532 418 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 SHISA2Q6UWI4 295 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 IL36BQ9NZH7 164 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 ZNF462Q96JM2 2506 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 H3BUX3 64 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 CCL16O15467 120 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 ZNF22P17026 224 aaPredicted RBP0.73□□□□□ -2.29
CEP290-201ENST00000309041 S100GP29377 79 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 ZNF66Q6ZN08 573 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 R4GMQ9 66 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 PRRC2AP48634 2157 aaKnown RBP0.73□□□□□ -2.29
CEP290-201ENST00000309041 ASCC3Q8N3C0 2202 aaKnown RBP0.73□□□□□ -2.29
CEP290-201ENST00000309041 GPR179Q6PRD1 2367 aa0.73□□□□□ -2.29
CEP290-201ENST00000309041 C3orf79P0CE67 100 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 RPL7P18124 248 aaKnown RBP0.72□□□□□ -2.29
CEP290-201ENST00000309041 LSM6P62312 80 aaKnown RBP0.72□□□□□ -2.29
CEP290-201ENST00000309041 DAZ3Q9NR90 486 aaKnown RBP0.72□□□□□ -2.29
CEP290-201ENST00000309041 MYO15AQ9UKN7 3530 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 IGKV2D-29A0A075B6S2 120 aaPredicted RBP0.72□□□□□ -2.29
CEP290-201ENST00000309041 J3QT63 122 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 PSPNO60542 156 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 CCL5P13501 91 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 C10orf55Q5SWW7 151 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 C20orf197Q8N268 126 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 SPEGQ15772 3267 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 DNAJC13O75165 2243 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 M0R233 179 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 IGKV1-39P01597 117 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 IGKV1D-39P04432 117 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 COX8AP10176 69 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 RPL28P46779 137 aaKnown RBP0.72□□□□□ -2.29
CEP290-201ENST00000309041 DYNLT3P51808 116 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 RHOHQ15669 191 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 VMA21Q3ZAQ7 101 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 LRRC37A5PQ49AS3 106 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 AQP12AQ8IXF9 295 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 DEFB123Q8N688 67 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 NABP1Q96AH0 204 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 TECTAO75443 2155 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 CNOT1A5YKK6 2376 aaKnown RBP0.72□□□□□ -2.29
CEP290-201ENST00000309041 URB1O60287 2271 aaKnown RBP0.72□□□□□ -2.29
CEP290-201ENST00000309041 DSPPQ9NZW4 1301 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 COX5BP10606 129 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 RPS3P23396 243 aaKnown RBP eCLIP0.72□□□□□ -2.29
CEP290-201ENST00000309041 GNG3P63215 75 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 FAM24BQ8N5W8 94 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 ODF3Q96PU9 254 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 SMCO4Q9NRQ5 59 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 TNRC6AQ8NDV7 1962 aaKnown RBP0.72□□□□□ -2.29
CEP290-201ENST00000309041 RP1P56715 2156 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 IGKV3-7A0A075B6H7 116 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 IGKV1D-42A0A075B6H8 117 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 A0A1W2PP18 115 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 IGKV2-30P06310 120 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 CFC1BP0CG36 223 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 CFC1P0CG37 223 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 SPACA4Q8TDM5 124 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 TMEM141Q96I45 108 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 KCNQ1DNQ9H478 68 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 RNF7Q9UBF6 113 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 ANAPC1Q9H1A4 1944 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 CREBBPQ92793 2442 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 TRGV3P03979 118 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 CDKN2AP42771 156 aaKnown RBP0.72□□□□□ -2.29
CEP290-201ENST00000309041 NCBP2P52298 156 aaKnown RBP eCLIP0.72□□□□□ -2.29
CEP290-201ENST00000309041 FHL1Q13642 323 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 PLGLAQ15195 96 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 Q8NAQ8 132 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 OBSCN-AS1Q96MR7 158 aa0.72□□□□□ -2.29
CEP290-201ENST00000309041 MED13LQ71F56 2210 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 RANBP2P49792 3224 aaKnown RBP0.71□□□□□ -2.3
CEP290-201ENST00000309041 RIF1Q5UIP0 2472 aaKnown RBP0.71□□□□□ -2.3
CEP290-201ENST00000309041 CYB5BO43169 146 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 ZNF883P0CG24 379 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 UBE2V1Q13404 147 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 PHLDA2Q53GA4 152 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 RNASE12Q5GAN4 147 aaKnown RBP0.71□□□□□ -2.3
CEP290-201ENST00000309041 Q8N814 137 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 LSM10Q969L4 123 aaKnown RBP0.71□□□□□ -2.3
CEP290-201ENST00000309041 CSTL1Q9H114 145 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 CDC42SE1Q9NRR8 79 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 TMEM100Q9NV29 134 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 PKD1L2Q7Z442 2459 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 IGKV1-6A0A0C4DH72 117 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 A0A1W2PRE2 83 aa0.71□□□□□ -2.3
CEP290-201ENST00000309041 KRTAP5-8O75690 187 aa0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 168.9 ms