RNA–Protein interactions for RNA: ENST00000308330.2

LEMD3-201, Transcript of LEM domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LEMD3, Length 4,764 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-201ENST00000308330 MRPL53Q96EL3 112 aaKnown RBP11.54□□□□□ -0.56
LEMD3-201ENST00000308330 RITA1Q96K30 269 aa11.54□□□□□ -0.56
LEMD3-201ENST00000308330 INAFM1C9JVW0 142 aa11.54□□□□□ -0.56
LEMD3-201ENST00000308330 SLURP1P55000 103 aa11.54□□□□□ -0.56
LEMD3-201ENST00000308330 APOC4P55056 127 aa11.54□□□□□ -0.56
LEMD3-201ENST00000308330 Q6ZS46 218 aa11.54□□□□□ -0.56
LEMD3-201ENST00000308330 LINC01561Q8N1V8 128 aa11.54□□□□□ -0.56
LEMD3-201ENST00000308330 IGHV1-58A0A0C4DH39 117 aa11.53□□□□□ -0.56
LEMD3-201ENST00000308330 FHL3Q13643 280 aa11.53□□□□□ -0.56
LEMD3-201ENST00000308330 NREPQ16612 68 aa11.53□□□□□ -0.56
LEMD3-201ENST00000308330 ZNF491Q8N8L2 437 aa11.53□□□□□ -0.56
LEMD3-201ENST00000308330 MUC22E2RYF6 1773 aaPredicted RBP11.53□□□□□ -0.56
LEMD3-201ENST00000308330 CFHR3Q02985 330 aa11.53□□□□□ -0.56
LEMD3-201ENST00000308330 CDSNQ15517 529 aa11.53□□□□□ -0.56
LEMD3-201ENST00000308330 ESRGQ1W209 222 aa11.53□□□□□ -0.56
LEMD3-201ENST00000308330 CLPSL1A2RUU4 121 aa11.52□□□□□ -0.56
LEMD3-201ENST00000308330 NCR3O14931 201 aa11.52□□□□□ -0.56
LEMD3-201ENST00000308330 HECTD1Q9ULT8 2610 aa11.52□□□□□ -0.56
LEMD3-201ENST00000308330 C5orf56Q8N8D9 126 aa11.52□□□□□ -0.57
LEMD3-201ENST00000308330 KLK9Q9UKQ9 250 aa11.52□□□□□ -0.57
LEMD3-201ENST00000308330 NPBQ8NG41 125 aa11.52□□□□□ -0.57
LEMD3-201ENST00000308330 AGRNO00468 2067 aa11.52□□□□□ -0.57
LEMD3-201ENST00000308330 COX7B2Q8TF08 81 aa11.51□□□□□ -0.57
LEMD3-201ENST00000308330 PDE6GP18545 87 aa11.51□□□□□ -0.57
LEMD3-201ENST00000308330 IGLV2-14P01704 120 aa11.51□□□□□ -0.57
LEMD3-201ENST00000308330 IGHV4-31P0DP07 118 aa11.5□□□□□ -0.57
LEMD3-201ENST00000308330 NCKAP5O14513 1909 aa11.5□□□□□ -0.57
LEMD3-201ENST00000308330 ZNF106Q9H2Y7 1883 aaKnown RBP11.5□□□□□ -0.57
LEMD3-201ENST00000308330 FAM19A3Q7Z5A8 133 aa11.5□□□□□ -0.57
LEMD3-201ENST00000308330 SBSPONQ8IVN8 264 aa11.5□□□□□ -0.57
LEMD3-201ENST00000308330 OPRPNQ99935 248 aaPredicted RBP11.5□□□□□ -0.57
LEMD3-201ENST00000308330 EXPH5Q8NEV8 1989 aa11.49□□□□□ -0.57
LEMD3-201ENST00000308330 TNFRSF13BO14836 293 aaPredicted RBP11.49□□□□□ -0.57
LEMD3-201ENST00000308330 C9orf66Q5T8R8 295 aa11.49□□□□□ -0.57
LEMD3-201ENST00000308330 DNAJC9-AS1A6NH13 148 aa11.49□□□□□ -0.57
LEMD3-201ENST00000308330 P0C879 139 aa11.49□□□□□ -0.57
LEMD3-201ENST00000308330 RMI2Q96E14 147 aa11.49□□□□□ -0.57
LEMD3-201ENST00000308330 PSCAO43653 123 aa11.48□□□□□ -0.57
LEMD3-201ENST00000308330 RANBP2P49792 3224 aaKnown RBP11.48□□□□□ -0.57
LEMD3-201ENST00000308330 ZNF561-AS1K7EIQ3 104 aa11.47□□□□□ -0.57
LEMD3-201ENST00000308330 TNRC6BQ9UPQ9 1833 aaKnown RBP11.47□□□□□ -0.57
LEMD3-201ENST00000308330 K7EIM0 57 aa11.47□□□□□ -0.57
LEMD3-201ENST00000308330 IGHV3-16A0A0C4DH30 117 aa11.46□□□□□ -0.57
LEMD3-201ENST00000308330 C2orf48Q96LS8 159 aa11.46□□□□□ -0.57
LEMD3-201ENST00000308330 IGLV11-55A0A075B6I3 123 aa11.46□□□□□ -0.58
LEMD3-201ENST00000308330 A0A096LNJ9 63 aa11.46□□□□□ -0.58
LEMD3-201ENST00000308330 TEX22C9J3V5 150 aa11.46□□□□□ -0.58
LEMD3-201ENST00000308330 F8P00451 2351 aa11.46□□□□□ -0.58
LEMD3-201ENST00000308330 SS18Q15532 418 aa11.46□□□□□ -0.58
LEMD3-201ENST00000308330 IGKV1-17P01599 117 aa11.45□□□□□ -0.58
LEMD3-201ENST00000308330 IGHV4OR15-8A0A075B7B6 117 aa11.45□□□□□ -0.58
LEMD3-201ENST00000308330 A0A087WW49 117 aa11.45□□□□□ -0.58
LEMD3-201ENST00000308330 LINC01548A6NM66 108 aa11.45□□□□□ -0.58
LEMD3-201ENST00000308330 CTSGP08311 255 aa11.45□□□□□ -0.58
LEMD3-201ENST00000308330 C11orf71Q6IPW1 123 aa11.45□□□□□ -0.58
LEMD3-201ENST00000308330 CCKP06307 115 aa11.44□□□□□ -0.58
LEMD3-201ENST00000308330 APRG1Q8IVJ8 170 aa11.44□□□□□ -0.58
LEMD3-201ENST00000308330 A6NDX4 124 aa11.44□□□□□ -0.58
LEMD3-201ENST00000308330 EBI3Q14213 229 aa11.44□□□□□ -0.58
LEMD3-201ENST00000308330 SCXQ7RTU7 201 aa11.44□□□□□ -0.58
LEMD3-201ENST00000308330 H3BQ85 93 aa11.43□□□□□ -0.58
LEMD3-201ENST00000308330 BBC3Q96PG8 261 aaPredicted RBP11.43□□□□□ -0.58
LEMD3-201ENST00000308330 A0A0C4DFX4 3053 aa11.43□□□□□ -0.58
LEMD3-201ENST00000308330 I3L2K1 104 aa11.43□□□□□ -0.58
LEMD3-201ENST00000308330 FAM222AQ5U5X8 452 aa11.43□□□□□ -0.58
LEMD3-201ENST00000308330 RNF185Q96GF1 192 aa11.43□□□□□ -0.58
LEMD3-201ENST00000308330 LY6G6DO95868 133 aa11.42□□□□□ -0.58
LEMD3-201ENST00000308330 PRR15LQ9BU68 103 aa11.42□□□□□ -0.58
LEMD3-201ENST00000308330 KRTAP10-9P60411 292 aa11.42□□□□□ -0.58
LEMD3-201ENST00000308330 PRR4Q16378 134 aa11.42□□□□□ -0.58
LEMD3-201ENST00000308330 CGB3P0DN86 165 aa11.41□□□□□ -0.58
LEMD3-201ENST00000308330 CGB7P0DN87 165 aa11.41□□□□□ -0.58
LEMD3-201ENST00000308330 PRYO14603 147 aa11.41□□□□□ -0.58
LEMD3-201ENST00000308330 Q6ZPA2 131 aa11.41□□□□□ -0.58
LEMD3-201ENST00000308330 LINC00308Q8TCZ7 52 aa11.41□□□□□ -0.58
LEMD3-201ENST00000308330 SLPIP03973 132 aa11.4□□□□□ -0.58
LEMD3-201ENST00000308330 A0A087WZ39 114 aa11.4□□□□□ -0.59
LEMD3-201ENST00000308330 E7EUB6 86 aa11.4□□□□□ -0.59
LEMD3-201ENST00000308330 GNRH2O43555 120 aa11.39□□□□□ -0.59
LEMD3-201ENST00000308330 IGLV2-23P01705 113 aa11.39□□□□□ -0.59
LEMD3-201ENST00000308330 IGHV3-38A0A0C4DH36 116 aa11.39□□□□□ -0.59
LEMD3-201ENST00000308330 BPY2O14599 106 aa11.39□□□□□ -0.59
LEMD3-201ENST00000308330 Q8N6K4 173 aa11.39□□□□□ -0.59
LEMD3-201ENST00000308330 Q6YL49 198 aa11.38□□□□□ -0.59
LEMD3-201ENST00000308330 NKAPP1Q8N9T2 125 aa11.38□□□□□ -0.59
LEMD3-201ENST00000308330 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.38□□□□□ -0.59
LEMD3-201ENST00000308330 IGKV2-29A2NJV5 120 aaPredicted RBP11.38□□□□□ -0.59
LEMD3-201ENST00000308330 FSTL3O95633 263 aa11.37□□□□□ -0.59
LEMD3-201ENST00000308330 LENEPQ9Y5L5 61 aa11.37□□□□□ -0.59
LEMD3-201ENST00000308330 HIGD2BQ4VC39 106 aa11.37□□□□□ -0.59
LEMD3-201ENST00000308330 ODF3BA8MYP8 253 aa11.37□□□□□ -0.59
LEMD3-201ENST00000308330 NDUFB1O75438 58 aa11.37□□□□□ -0.59
LEMD3-201ENST00000308330 A0A096LPF7 62 aa11.37□□□□□ -0.59
LEMD3-201ENST00000308330 FHL2Q14192 279 aa11.37□□□□□ -0.59
LEMD3-201ENST00000308330 MIR7-3HGQ8N6C7 128 aa11.37□□□□□ -0.59
LEMD3-201ENST00000308330 C20orf203Q8NBC4 194 aa11.37□□□□□ -0.59
LEMD3-201ENST00000308330 LRP4O75096 1905 aa11.37□□□□□ -0.59
LEMD3-201ENST00000308330 HILS1P60008 231 aa11.36□□□□□ -0.59
LEMD3-201ENST00000308330 NOP10Q9NPE3 64 aaKnown RBP11.36□□□□□ -0.59
LEMD3-201ENST00000308330 IGHV4-28A0A0C4DH34 117 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms