RNA–Protein interactions for RNA: ENST00000308091.8

RAPH1-201, Transcript of Ras association (RalGDS/AF-6) and pleckstrin homology domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPH1, Length 2,768 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1-201ENST00000308091 C2CD3Q4AC94 2353 aa13.53□□□□□ -0.24
RAPH1-201ENST00000308091 COX6CP09669 75 aa13.53□□□□□ -0.24
RAPH1-201ENST00000308091 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.52□□□□□ -0.24
RAPH1-201ENST00000308091 IGKV2-29A2NJV5 120 aaPredicted RBP13.52□□□□□ -0.24
RAPH1-201ENST00000308091 ZNF702PQ9H963 129 aa13.52□□□□□ -0.24
RAPH1-201ENST00000308091 EPG5Q9HCE0 2579 aa13.52□□□□□ -0.25
RAPH1-201ENST00000308091 NAV2Q8IVL1 2488 aa13.52□□□□□ -0.25
RAPH1-201ENST00000308091 SMCR5Q8TEV8 140 aa13.52□□□□□ -0.25
RAPH1-201ENST00000308091 NDUFA12Q9UI09 145 aa13.52□□□□□ -0.25
RAPH1-201ENST00000308091 WNK1Q9H4A3 2382 aa13.51□□□□□ -0.25
RAPH1-201ENST00000308091 C9orf153Q5TBE3 101 aa13.51□□□□□ -0.25
RAPH1-201ENST00000308091 CHD6Q8TD26 2715 aa13.51□□□□□ -0.25
RAPH1-201ENST00000308091 SONP18583 2426 aaKnown RBP13.51□□□□□ -0.25
RAPH1-201ENST00000308091 RS1O15537 224 aa13.5□□□□□ -0.25
RAPH1-201ENST00000308091 ZNF625Q96I27 306 aaPredicted RBP13.5□□□□□ -0.25
RAPH1-201ENST00000308091 SETD2Q9BYW2 2564 aaPredicted RBP13.5□□□□□ -0.25
RAPH1-201ENST00000308091 TMEM89A2RUT3 159 aa13.5□□□□□ -0.25
RAPH1-201ENST00000308091 UBE2E2Q96LR5 201 aa13.5□□□□□ -0.25
RAPH1-201ENST00000308091 MRPS36P82909 103 aaKnown RBP13.49□□□□□ -0.25
RAPH1-201ENST00000308091 TMEM101Q96IK0 257 aa13.49□□□□□ -0.25
RAPH1-201ENST00000308091 LST1O00453 97 aa13.49□□□□□ -0.25
RAPH1-201ENST00000308091 TMEM61Q8N0U2 210 aa13.49□□□□□ -0.25
RAPH1-201ENST00000308091 H3BT86 120 aa13.49□□□□□ -0.25
RAPH1-201ENST00000308091 ZNF462Q96JM2 2506 aa13.48□□□□□ -0.25
RAPH1-201ENST00000308091 CHCHD7Q9BUK0 85 aa13.48□□□□□ -0.25
RAPH1-201ENST00000308091 PYGO1Q9Y3Y4 419 aa13.48□□□□□ -0.25
RAPH1-201ENST00000308091 A0A096LNT2 108 aa13.48□□□□□ -0.25
RAPH1-201ENST00000308091 LINC00467Q9BRT7 94 aa13.48□□□□□ -0.25
RAPH1-201ENST00000308091 KHDC1LQ5JSQ8 128 aa13.47□□□□□ -0.25
RAPH1-201ENST00000308091 NF1P21359 2839 aa13.46□□□□□ -0.25
RAPH1-201ENST00000308091 IGHV1-58A0A0C4DH39 117 aa13.46□□□□□ -0.26
RAPH1-201ENST00000308091 UBE2D4Q9Y2X8 147 aa13.46□□□□□ -0.26
RAPH1-201ENST00000308091 NIPBLQ6KC79 2804 aaeCLIP13.45□□□□□ -0.26
RAPH1-201ENST00000308091 RNF152Q8N8N0 203 aa13.45□□□□□ -0.26
RAPH1-201ENST00000308091 TRBV7-7A0A0K0K1E9 115 aa13.45□□□□□ -0.26
RAPH1-201ENST00000308091 MIAQ16674 131 aa13.45□□□□□ -0.26
RAPH1-201ENST00000308091 VSIG2Q96IQ7 327 aa13.44□□□□□ -0.26
RAPH1-201ENST00000308091 Q6YL49 198 aa13.44□□□□□ -0.26
RAPH1-201ENST00000308091 TMEM126AQ9H061 195 aa13.44□□□□□ -0.26
RAPH1-201ENST00000308091 JMJD1CQ15652 2540 aa13.44□□□□□ -0.26
RAPH1-201ENST00000308091 DSCR9P59020 149 aa13.43□□□□□ -0.26
RAPH1-201ENST00000308091 HERVK_113P63121 156 aa13.43□□□□□ -0.26
RAPH1-201ENST00000308091 ZNF415Q09FC8 603 aa13.43□□□□□ -0.26
RAPH1-201ENST00000308091 EDA2RQ9HAV5 297 aa13.43□□□□□ -0.26
RAPH1-201ENST00000308091 ZNF469Q96JG9 3925 aaPredicted RBP13.43□□□□□ -0.26
RAPH1-201ENST00000308091 MAP6D1Q9H9H5 199 aa13.42□□□□□ -0.26
RAPH1-201ENST00000308091 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.42□□□□□ -0.26
RAPH1-201ENST00000308091 CDKN2A-AS1Q9UH64 79 aa13.42□□□□□ -0.26
RAPH1-201ENST00000308091 CSDC2Q9Y534 153 aaKnown RBP13.42□□□□□ -0.26
RAPH1-201ENST00000308091 IGHV3OR16-12A0A075B7B8 117 aa13.41□□□□□ -0.26
RAPH1-201ENST00000308091 FAM240AA0A1B0GVK7 77 aa13.41□□□□□ -0.26
RAPH1-201ENST00000308091 NDUFA7O95182 113 aa13.41□□□□□ -0.26
RAPH1-201ENST00000308091 C11orf72Q8NBR9 251 aa13.41□□□□□ -0.26
RAPH1-201ENST00000308091 AKAP9Q99996 3911 aa13.41□□□□□ -0.26
RAPH1-201ENST00000308091 TINCRA0A1B0GVN0 87 aa13.41□□□□□ -0.26
RAPH1-201ENST00000308091 Q8N2B8 174 aa13.41□□□□□ -0.26
RAPH1-201ENST00000308091 CITED2Q99967 270 aaPredicted RBP13.41□□□□□ -0.26
RAPH1-201ENST00000308091 LINC01600Q96MT4 127 aa13.4□□□□□ -0.26
RAPH1-201ENST00000308091 J3QLI3 93 aa13.4□□□□□ -0.26
RAPH1-201ENST00000308091 C3orf22Q8N5N4 141 aa13.4□□□□□ -0.26
RAPH1-201ENST00000308091 SPANXA1Q9NS26 97 aa13.4□□□□□ -0.26
RAPH1-201ENST00000308091 XCL2Q9UBD3 114 aa13.4□□□□□ -0.26
RAPH1-201ENST00000308091 DAZ2Q13117 558 aaKnown RBP13.39□□□□□ -0.27
RAPH1-201ENST00000308091 DAZ4Q86SG3 579 aaKnown RBP13.39□□□□□ -0.27
RAPH1-201ENST00000308091 DYNLRB2Q8TF09 96 aa13.39□□□□□ -0.27
RAPH1-201ENST00000308091 SPANXDQ9BXN6 97 aa13.39□□□□□ -0.27
RAPH1-201ENST00000308091 DAZ3Q9NR90 486 aaKnown RBP13.39□□□□□ -0.27
RAPH1-201ENST00000308091 SPANXCQ9NY87 97 aa13.39□□□□□ -0.27
RAPH1-201ENST00000308091 CCDC168Q8NDH2 2452 aa13.38□□□□□ -0.27
RAPH1-201ENST00000308091 A8MTW9 85 aa13.38□□□□□ -0.27
RAPH1-201ENST00000308091 IGHV3-53P01767 116 aa13.38□□□□□ -0.27
RAPH1-201ENST00000308091 IGHV4-31P0DP07 118 aa13.38□□□□□ -0.27
RAPH1-201ENST00000308091 COX6A2Q02221 97 aa13.38□□□□□ -0.27
RAPH1-201ENST00000308091 DEFB121Q5J5C9 76 aa13.37□□□□□ -0.27
RAPH1-201ENST00000308091 CYSTM1Q9H1C7 97 aa13.37□□□□□ -0.27
RAPH1-201ENST00000308091 PRB1P04280 392 aa13.37□□□□□ -0.27
RAPH1-201ENST00000308091 FSHBP01225 129 aa13.37□□□□□ -0.27
RAPH1-201ENST00000308091 KRTAP10-9P60411 292 aa13.37□□□□□ -0.27
RAPH1-201ENST00000308091 GAGE2AQ6NT46 116 aa13.37□□□□□ -0.27
RAPH1-201ENST00000308091 C11orf44Q8N8P7 122 aa13.37□□□□□ -0.27
RAPH1-201ENST00000308091 Q9HAA7 133 aa13.36□□□□□ -0.27
RAPH1-201ENST00000308091 DGAT2L7PQ6IED9 249 aa13.36□□□□□ -0.27
RAPH1-201ENST00000308091 CR1P17927 2039 aa13.35□□□□□ -0.27
RAPH1-201ENST00000308091 PEMTQ9UBM1 199 aa13.35□□□□□ -0.27
RAPH1-201ENST00000308091 INSP01308 110 aa13.34□□□□□ -0.27
RAPH1-201ENST00000308091 FAM19A5Q7Z5A7 132 aaPredicted RBP13.34□□□□□ -0.27
RAPH1-201ENST00000308091 DNAJC30Q96LL9 226 aa13.34□□□□□ -0.27
RAPH1-201ENST00000308091 TRAV13-1A0A0B4J241 112 aa13.34□□□□□ -0.27
RAPH1-201ENST00000308091 hADV29S1A0JD25 119 aa13.34□□□□□ -0.27
RAPH1-201ENST00000308091 DEFB114Q30KQ6 69 aa13.34□□□□□ -0.27
RAPH1-201ENST00000308091 FAM218AQ96MZ4 157 aa13.33□□□□□ -0.28
RAPH1-201ENST00000308091 TRGV1A0A0A0MS02 117 aa13.32□□□□□ -0.28
RAPH1-201ENST00000308091 UQCRQO14949 82 aa13.32□□□□□ -0.28
RAPH1-201ENST00000308091 BAALC-AS2P0C853 105 aa13.32□□□□□ -0.28
RAPH1-201ENST00000308091 SDIM1Q6ZPB5 146 aa13.32□□□□□ -0.28
RAPH1-201ENST00000308091 BEAN1Q3B7T3 259 aa13.32□□□□□ -0.28
RAPH1-201ENST00000308091 Q9H8V8 135 aa13.32□□□□□ -0.28
RAPH1-201ENST00000308091 A0A1W2PRX2 142 aa13.32□□□□□ -0.28
RAPH1-201ENST00000308091 TIRAPP58753 221 aa13.32□□□□□ -0.28
RAPH1-201ENST00000308091 LINC00643Q86TS7 51 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms