RNA–Protein interactions for RNA: ENST00000304636.7

COL3A1-201, Transcript of collagen type III alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL3A1, Length 5,543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-201ENST00000304636 CHCHD10Q8WYQ3 142 aaPredicted RBP9.51□□□□□ -0.89
COL3A1-201ENST00000304636 A0A0U1RQV1 116 aa9.51□□□□□ -0.89
COL3A1-201ENST00000304636 TRBV6-4A0A1B0GX49 114 aa9.51□□□□□ -0.89
COL3A1-201ENST00000304636 NDUFC2-KCTD14E9PQ53 114 aa9.51□□□□□ -0.89
COL3A1-201ENST00000304636 TRBV6-8A0A0A6YYG3 113 aa9.5□□□□□ -0.89
COL3A1-201ENST00000304636 DEFB4AO15263 64 aa9.5□□□□□ -0.89
COL3A1-201ENST00000304636 C11orf71Q6IPW1 123 aa9.5□□□□□ -0.89
COL3A1-201ENST00000304636 CLUHP3Q96NS8 147 aa9.5□□□□□ -0.89
COL3A1-201ENST00000304636 PSMG3-AS1Q96PY0 264 aa9.5□□□□□ -0.89
COL3A1-201ENST00000304636 COX8CQ7Z4L0 72 aa9.49□□□□□ -0.89
COL3A1-201ENST00000304636 A0A096LNJ9 63 aa9.49□□□□□ -0.89
COL3A1-201ENST00000304636 UBE2D3P61077 147 aa9.49□□□□□ -0.89
COL3A1-201ENST00000304636 UBE2D2P62837 147 aa9.49□□□□□ -0.89
COL3A1-201ENST00000304636 Q6YL49 198 aa9.49□□□□□ -0.89
COL3A1-201ENST00000304636 NDUFC1O43677 76 aa9.49□□□□□ -0.89
COL3A1-201ENST00000304636 LRRC75A-AS1Q8N1F1 130 aa9.49□□□□□ -0.89
COL3A1-201ENST00000304636 ATP5EP56381 51 aaPredicted RBP9.48□□□□□ -0.89
COL3A1-201ENST00000304636 ANKHD1Q8IWZ3 2542 aaKnown RBP9.48□□□□□ -0.89
COL3A1-201ENST00000304636 SMIM9A6NGZ8 99 aa9.48□□□□□ -0.89
COL3A1-201ENST00000304636 PLXNB1O43157 2135 aa9.48□□□□□ -0.89
COL3A1-201ENST00000304636 J3QKU1 62 aa9.48□□□□□ -0.89
COL3A1-201ENST00000304636 C6orf99Q4VX62 202 aa9.48□□□□□ -0.89
COL3A1-201ENST00000304636 SEC61GP60059 68 aa9.47□□□□□ -0.89
COL3A1-201ENST00000304636 IGLV4-69A0A075B6H9 119 aa9.47□□□□□ -0.89
COL3A1-201ENST00000304636 H0Y9J4 135 aa9.47□□□□□ -0.89
COL3A1-201ENST00000304636 POM121L12Q8N7R1 296 aa9.47□□□□□ -0.89
COL3A1-201ENST00000304636 LYRM9A8MSI8 78 aa9.47□□□□□ -0.89
COL3A1-201ENST00000304636 Q6JHZ5 121 aa9.46□□□□□ -0.89
COL3A1-201ENST00000304636 UBE2AP49459 152 aa9.46□□□□□ -0.9
COL3A1-201ENST00000304636 SCXQ7RTU7 201 aa9.46□□□□□ -0.9
COL3A1-201ENST00000304636 SMIM11BQ8TCY0 68 aa9.46□□□□□ -0.9
COL3A1-201ENST00000304636 F8W735 103 aaPredicted RBP9.46□□□□□ -0.9
COL3A1-201ENST00000304636 DNAJC9-AS1A6NH13 148 aa9.45□□□□□ -0.9
COL3A1-201ENST00000304636 DCANP1Q8TF63 244 aa9.45□□□□□ -0.9
COL3A1-201ENST00000304636 WFDC11Q8NEX6 87 aa9.44□□□□□ -0.9
COL3A1-201ENST00000304636 PRR14LQ5THK1 2151 aa9.44□□□□□ -0.9
COL3A1-201ENST00000304636 TANC2Q9HCD6 1990 aa9.43□□□□□ -0.9
COL3A1-201ENST00000304636 IGKV4-1P06312 121 aa9.43□□□□□ -0.9
COL3A1-201ENST00000304636 IGLV1-40P01703 118 aa9.43□□□□□ -0.9
COL3A1-201ENST00000304636 CRIP2P52943 208 aaPredicted RBP9.43□□□□□ -0.9
COL3A1-201ENST00000304636 LINC00694P0DN24 101 aa9.43□□□□□ -0.9
COL3A1-201ENST00000304636 TECTAO75443 2155 aa9.43□□□□□ -0.9
COL3A1-201ENST00000304636 IGLV2-18A0A075B6J9 118 aa9.42□□□□□ -0.9
COL3A1-201ENST00000304636 C19orf84I3L1E1 186 aa9.42□□□□□ -0.9
COL3A1-201ENST00000304636 TSPEAR-AS2P59090 65 aa9.42□□□□□ -0.9
COL3A1-201ENST00000304636 C10orf99Q6UWK7 81 aa9.42□□□□□ -0.9
COL3A1-201ENST00000304636 V9GYY9 64 aa9.42□□□□□ -0.9
COL3A1-201ENST00000304636 CCKP06307 115 aa9.41□□□□□ -0.9
COL3A1-201ENST00000304636 CD164L2Q6UWJ8 174 aa9.41□□□□□ -0.9
COL3A1-201ENST00000304636 EML5Q05BV3 1969 aa9.41□□□□□ -0.9
COL3A1-201ENST00000304636 ZFHX2Q9C0A1 2572 aaPredicted RBP9.4□□□□□ -0.9
COL3A1-201ENST00000304636 LINC00526Q96FQ7 95 aa9.4□□□□□ -0.9
COL3A1-201ENST00000304636 M0QXV9 152 aa9.4□□□□□ -0.9
COL3A1-201ENST00000304636 CDC42SE2Q9NRR3 84 aa9.4□□□□□ -0.9
COL3A1-201ENST00000304636 LINC00959A0A1B0GUT2 108 aa9.4□□□□□ -0.91
COL3A1-201ENST00000304636 IGHV4-31P0DP07 118 aa9.4□□□□□ -0.91
COL3A1-201ENST00000304636 Q6ZQY7 126 aa9.4□□□□□ -0.91
COL3A1-201ENST00000304636 COX17Q14061 63 aa9.39□□□□□ -0.91
COL3A1-201ENST00000304636 SNURFQ9Y675 71 aa9.39□□□□□ -0.91
COL3A1-201ENST00000304636 MRGPRG-AS1Q2M3A8 158 aa9.39□□□□□ -0.91
COL3A1-201ENST00000304636 XAGE1AQ9HD64 81 aa9.39□□□□□ -0.91
COL3A1-201ENST00000304636 CPAMD8Q8IZJ3 1885 aa9.39□□□□□ -0.91
COL3A1-201ENST00000304636 LRP4O75096 1905 aa9.39□□□□□ -0.91
COL3A1-201ENST00000304636 LINC00242Q5T6M2 205 aa9.39□□□□□ -0.91
COL3A1-201ENST00000304636 FAM19A3Q7Z5A8 133 aa9.38□□□□□ -0.91
COL3A1-201ENST00000304636 RPL28P46779 137 aaKnown RBP9.38□□□□□ -0.91
COL3A1-201ENST00000304636 PTPRSQ13332 1948 aa9.38□□□□□ -0.91
COL3A1-201ENST00000304636 B9D2Q9BPU9 175 aa9.37□□□□□ -0.91
COL3A1-201ENST00000304636 ZNF702PQ9H963 129 aa9.37□□□□□ -0.91
COL3A1-201ENST00000304636 MUC7Q8TAX7 377 aa9.37□□□□□ -0.91
COL3A1-201ENST00000304636 C4orf48Q5BLP8 95 aa9.36□□□□□ -0.91
COL3A1-201ENST00000304636 Q8IZM0 81 aa9.36□□□□□ -0.91
COL3A1-201ENST00000304636 AMELXQ99217 191 aa9.36□□□□□ -0.91
COL3A1-201ENST00000304636 SMIM1B2RUZ4 78 aa9.36□□□□□ -0.91
COL3A1-201ENST00000304636 CEP192Q8TEP8 1941 aa9.35□□□□□ -0.91
COL3A1-201ENST00000304636 CASC2Q6XLA1 102 aa9.35□□□□□ -0.91
COL3A1-201ENST00000304636 Q6ZSV7 163 aa9.35□□□□□ -0.91
COL3A1-201ENST00000304636 CHCHD7Q9BUK0 85 aa9.35□□□□□ -0.91
COL3A1-201ENST00000304636 ADAMTSL4-AS1Q5T5F5 129 aa9.35□□□□□ -0.91
COL3A1-201ENST00000304636 LOC100131303A0A0U1RQF7 123 aa9.35□□□□□ -0.91
COL3A1-201ENST00000304636 HIGD2AQ9BW72 106 aa9.35□□□□□ -0.91
COL3A1-201ENST00000304636 NAV3Q8IVL0 2385 aa9.35□□□□□ -0.91
COL3A1-201ENST00000304636 LINC01546A6NGU7 62 aa9.35□□□□□ -0.91
COL3A1-201ENST00000304636 PRM2P04554 102 aa9.35□□□□□ -0.91
COL3A1-201ENST00000304636 BBC3Q96PG8 261 aaPredicted RBP9.35□□□□□ -0.91
COL3A1-201ENST00000304636 COL5A1P20908 1838 aaPredicted RBP9.35□□□□□ -0.91
COL3A1-201ENST00000304636 M0R378 163 aa9.34□□□□□ -0.91
COL3A1-201ENST00000304636 C1orf158Q8N1D5 194 aa9.34□□□□□ -0.91
COL3A1-201ENST00000304636 C3orf84H3BNL1 204 aa9.34□□□□□ -0.91
COL3A1-201ENST00000304636 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP9.34□□□□□ -0.91
COL3A1-201ENST00000304636 CDIP1Q9H305 208 aa9.34□□□□□ -0.91
COL3A1-201ENST00000304636 SMIM26A0A096LP01 95 aa9.34□□□□□ -0.91
COL3A1-201ENST00000304636 PTPRQQ9UMZ3 2332 aa9.34□□□□□ -0.91
COL3A1-201ENST00000304636 TRAV7A0A075B6U4 112 aa9.33□□□□□ -0.92
COL3A1-201ENST00000304636 MIFP14174 115 aa9.33□□□□□ -0.92
COL3A1-201ENST00000304636 WNK1Q9H4A3 2382 aa9.33□□□□□ -0.92
COL3A1-201ENST00000304636 FAM208BQ5VWN6 2430 aa9.33□□□□□ -0.92
COL3A1-201ENST00000304636 A0A096LNI7 61 aa9.33□□□□□ -0.92
COL3A1-201ENST00000304636 PRORYQ9H606 182 aa9.33□□□□□ -0.92
COL3A1-201ENST00000304636 C11orf45Q8TAV5 145 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms