RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 C20orf197Q8N268 126 aa5.75□□□□□ -1.49
SF3B3-201ENST00000302516 ZNF80P51504 273 aaPredicted RBP5.75□□□□□ -1.49
SF3B3-201ENST00000302516 UNQ9165/PRO28630Q6UXU0 137 aa5.75□□□□□ -1.49
SF3B3-201ENST00000302516 LINC00322Q6ZN03 302 aaPredicted RBP5.75□□□□□ -1.49
SF3B3-201ENST00000302516 FAM19A3Q7Z5A8 133 aa5.75□□□□□ -1.49
SF3B3-201ENST00000302516 CNFNQ9BYD5 112 aa5.75□□□□□ -1.49
SF3B3-201ENST00000302516 C2orf91Q6ZV80 131 aa5.75□□□□□ -1.49
SF3B3-201ENST00000302516 TNFRSF13BO14836 293 aaPredicted RBP5.75□□□□□ -1.49
SF3B3-201ENST00000302516 PRB1P04280 392 aa5.75□□□□□ -1.49
SF3B3-201ENST00000302516 KLK12Q9UKR0 248 aa5.75□□□□□ -1.49
SF3B3-201ENST00000302516 RNF185Q96GF1 192 aa5.75□□□□□ -1.49
SF3B3-201ENST00000302516 COX7CP15954 63 aa5.75□□□□□ -1.49
SF3B3-201ENST00000302516 GRNP28799 593 aaKnown RBP5.74□□□□□ -1.49
SF3B3-201ENST00000302516 IGLV2-11P01706 119 aa5.74□□□□□ -1.49
SF3B3-201ENST00000302516 Q6JHZ5 121 aa5.74□□□□□ -1.49
SF3B3-201ENST00000302516 CHCHD10Q8WYQ3 142 aaPredicted RBP5.74□□□□□ -1.49
SF3B3-201ENST00000302516 DEFB135Q30KP9 77 aa5.74□□□□□ -1.49
SF3B3-201ENST00000302516 NRACQ8N912 160 aa5.74□□□□□ -1.49
SF3B3-201ENST00000302516 EBI3Q14213 229 aa5.73□□□□□ -1.49
SF3B3-201ENST00000302516 SPTSSBQ8NFR3 76 aa5.73□□□□□ -1.49
SF3B3-201ENST00000302516 K7EQG2 157 aa5.73□□□□□ -1.49
SF3B3-201ENST00000302516 TRBV6-4A0A1B0GX49 114 aa5.73□□□□□ -1.49
SF3B3-201ENST00000302516 ADORA2A-AS1P86434 159 aa5.73□□□□□ -1.49
SF3B3-201ENST00000302516 ZFAND3Q9H8U3 227 aa5.73□□□□□ -1.49
SF3B3-201ENST00000302516 CDKN2A-AS1Q9UH64 79 aa5.73□□□□□ -1.49
SF3B3-201ENST00000302516 TP53TG3Q9ULZ0 132 aa5.73□□□□□ -1.49
SF3B3-201ENST00000302516 CASC2Q6XLA1 102 aa5.73□□□□□ -1.49
SF3B3-201ENST00000302516 LINC00269Q8N2A0 174 aa5.73□□□□□ -1.49
SF3B3-201ENST00000302516 ZNF706Q9Y5V0 76 aaPredicted RBP5.73□□□□□ -1.49
SF3B3-201ENST00000302516 BRWD1-AS2P59051 145 aa5.72□□□□□ -1.49
SF3B3-201ENST00000302516 SMAD5-AS1Q9Y6J3 95 aa5.72□□□□□ -1.49
SF3B3-201ENST00000302516 C20orf173Q96LM9 149 aa5.72□□□□□ -1.49
SF3B3-201ENST00000302516 LY6LH3BQJ8 138 aa5.72□□□□□ -1.49
SF3B3-201ENST00000302516 M0QXV9 152 aa5.72□□□□□ -1.49
SF3B3-201ENST00000302516 MPLKIPQ8TAP9 179 aa5.72□□□□□ -1.49
SF3B3-201ENST00000302516 MRGPRG-AS1Q2M3A8 158 aa5.71□□□□□ -1.49
SF3B3-201ENST00000302516 TRBV6-8A0A0A6YYG3 113 aa5.71□□□□□ -1.49
SF3B3-201ENST00000302516 MTORP42345 2549 aa5.71□□□□□ -1.49
SF3B3-201ENST00000302516 MRPS12O15235 138 aaKnown RBP5.71□□□□□ -1.49
SF3B3-201ENST00000302516 CRIP3Q6Q6R5 217 aa5.71□□□□□ -1.49
SF3B3-201ENST00000302516 SERP1Q9Y6X1 66 aa5.71□□□□□ -1.5
SF3B3-201ENST00000302516 CEMP1Q6PRD7 247 aaPredicted RBP5.71□□□□□ -1.5
SF3B3-201ENST00000302516 TSHBP01222 138 aa5.71□□□□□ -1.5
SF3B3-201ENST00000302516 DNAJC9-AS1A6NH13 148 aa5.7□□□□□ -1.5
SF3B3-201ENST00000302516 Q6ZPA2 131 aa5.7□□□□□ -1.5
SF3B3-201ENST00000302516 CD164L2Q6UWJ8 174 aa5.7□□□□□ -1.5
SF3B3-201ENST00000302516 MAPKAPK5-AS1Q8N8E1 139 aa5.7□□□□□ -1.5
SF3B3-201ENST00000302516 PRB2P02812 416 aaPredicted RBP5.7□□□□□ -1.5
SF3B3-201ENST00000302516 CCKP06307 115 aa5.7□□□□□ -1.5
SF3B3-201ENST00000302516 MIFP14174 115 aa5.7□□□□□ -1.5
SF3B3-201ENST00000302516 CRYGDP07320 174 aa5.7□□□□□ -1.5
SF3B3-201ENST00000302516 Q6ZTI0 123 aa5.69□□□□□ -1.5
SF3B3-201ENST00000302516 KLLNB2CW77 178 aa5.69□□□□□ -1.5
SF3B3-201ENST00000302516 CRIP1P50238 77 aa5.69□□□□□ -1.5
SF3B3-201ENST00000302516 ZFHX2Q9C0A1 2572 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-201ENST00000302516 COL27A1Q8IZC6 1860 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-201ENST00000302516 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.69□□□□□ -1.5
SF3B3-201ENST00000302516 NAV2Q8IVL1 2488 aa5.69□□□□□ -1.5
SF3B3-201ENST00000302516 C9orf85Q96MD7 179 aa5.69□□□□□ -1.5
SF3B3-201ENST00000302516 M0R378 163 aa5.69□□□□□ -1.5
SF3B3-201ENST00000302516 Q6YL49 198 aa5.69□□□□□ -1.5
SF3B3-201ENST00000302516 C11orf45Q8TAV5 145 aa5.69□□□□□ -1.5
SF3B3-201ENST00000302516 DEFB114Q30KQ6 69 aa5.68□□□□□ -1.5
SF3B3-201ENST00000302516 SMIM26A0A096LP01 95 aa5.68□□□□□ -1.5
SF3B3-201ENST00000302516 TRAV7A0A075B6U4 112 aa5.68□□□□□ -1.5
SF3B3-201ENST00000302516 UBE2D1P51668 147 aa5.68□□□□□ -1.5
SF3B3-201ENST00000302516 FASNP49327 2511 aaKnown RBP5.68□□□□□ -1.5
SF3B3-201ENST00000302516 UBE2D4Q9Y2X8 147 aa5.68□□□□□ -1.5
SF3B3-201ENST00000302516 C2CD3Q4AC94 2353 aa5.68□□□□□ -1.5
SF3B3-201ENST00000302516 SPTBN4Q9H254 2564 aa5.68□□□□□ -1.5
SF3B3-201ENST00000302516 CCDC179H3BU77 68 aa5.67□□□□□ -1.5
SF3B3-201ENST00000302516 Q8IZM0 81 aa5.67□□□□□ -1.5
SF3B3-201ENST00000302516 A6NED7 52 aa5.67□□□□□ -1.5
SF3B3-201ENST00000302516 XGP55808 180 aa5.67□□□□□ -1.5
SF3B3-201ENST00000302516 DEFB1P60022 68 aa5.67□□□□□ -1.5
SF3B3-201ENST00000302516 WFDC10BQ8IUB3 73 aa5.67□□□□□ -1.5
SF3B3-201ENST00000302516 MSMPQ1L6U9 139 aa5.66□□□□□ -1.5
SF3B3-201ENST00000302516 LINC00526Q96FQ7 95 aa5.66□□□□□ -1.5
SF3B3-201ENST00000302516 LINC00474Q9P2X8 69 aa5.66□□□□□ -1.5
SF3B3-201ENST00000302516 LMO4P61968 165 aa5.66□□□□□ -1.5
SF3B3-201ENST00000302516 PCSK5Q92824 1860 aa5.66□□□□□ -1.5
SF3B3-201ENST00000302516 FAM19A1Q7Z5A9 133 aa5.66□□□□□ -1.5
SF3B3-201ENST00000302516 HILS1P60008 231 aa5.66□□□□□ -1.5
SF3B3-201ENST00000302516 RNASE3P12724 160 aaKnown RBP5.66□□□□□ -1.5
SF3B3-201ENST00000302516 POLR2KP53803 58 aaKnown RBP5.65□□□□□ -1.5
SF3B3-201ENST00000302516 C6orf99Q4VX62 202 aa5.65□□□□□ -1.5
SF3B3-201ENST00000302516 C1orf195Q5TG92 126 aa5.65□□□□□ -1.5
SF3B3-201ENST00000302516 F8WDY8 70 aa5.65□□□□□ -1.5
SF3B3-201ENST00000302516 ZNF73O43830 326 aaPredicted RBP5.65□□□□□ -1.5
SF3B3-201ENST00000302516 PRORYQ9H606 182 aa5.65□□□□□ -1.5
SF3B3-201ENST00000302516 SLPIP03973 132 aa5.65□□□□□ -1.51
SF3B3-201ENST00000302516 Q8N6K4 173 aa5.65□□□□□ -1.51
SF3B3-201ENST00000302516 A0A0U1RQV1 116 aa5.65□□□□□ -1.51
SF3B3-201ENST00000302516 LINC01548A6NM66 108 aa5.65□□□□□ -1.51
SF3B3-201ENST00000302516 UBE2D3P61077 147 aa5.65□□□□□ -1.51
SF3B3-201ENST00000302516 UBE2D2P62837 147 aa5.65□□□□□ -1.51
SF3B3-201ENST00000302516 SYCNQ0VAF6 134 aa5.65□□□□□ -1.51
SF3B3-201ENST00000302516 SMIM11BQ8TCY0 68 aa5.65□□□□□ -1.51
SF3B3-201ENST00000302516 HIGD2AQ9BW72 106 aa5.65□□□□□ -1.51
SF3B3-201ENST00000302516 ESM1Q9NQ30 184 aa5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms