RNA–Protein interactions for RNA: ENST00000299705.9

TMED3-201, Transcript of transmembrane p24 trafficking protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMED3, Length 1,475 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMED3-201ENST00000299705 MRPS36P82909 103 aaKnown RBP12.12□□□□□ -0.47
TMED3-201ENST00000299705 LINC00269Q8N2A0 174 aa12.12□□□□□ -0.47
TMED3-201ENST00000299705 ZNF664Q8N3J9 261 aa12.12□□□□□ -0.47
TMED3-201ENST00000299705 TRAV8-3A0A0A6YYJ7 113 aa12.11□□□□□ -0.47
TMED3-201ENST00000299705 SERF1AO75920 110 aa12.11□□□□□ -0.47
TMED3-201ENST00000299705 LINC00310P59036 64 aa12.11□□□□□ -0.47
TMED3-201ENST00000299705 SACSQ9NZJ4 4579 aa12.11□□□□□ -0.47
TMED3-201ENST00000299705 A0A096LNJ9 63 aa12.1□□□□□ -0.47
TMED3-201ENST00000299705 IGIPA6NJ69 53 aa12.1□□□□□ -0.47
TMED3-201ENST00000299705 HSBP1O75506 76 aa12.1□□□□□ -0.47
TMED3-201ENST00000299705 HBDP02042 147 aa12.1□□□□□ -0.47
TMED3-201ENST00000299705 ENHOQ6UWT2 76 aa12.1□□□□□ -0.47
TMED3-201ENST00000299705 UBE2WQ96B02 151 aa12.1□□□□□ -0.47
TMED3-201ENST00000299705 CRPP02741 224 aa12.09□□□□□ -0.47
TMED3-201ENST00000299705 REG3AQ06141 175 aa12.09□□□□□ -0.47
TMED3-201ENST00000299705 ERASQ7Z444 233 aa12.09□□□□□ -0.47
TMED3-201ENST00000299705 FAM104AQ969W3 186 aa12.09□□□□□ -0.47
TMED3-201ENST00000299705 TIMM17AQ99595 171 aa12.09□□□□□ -0.47
TMED3-201ENST00000299705 PMCHL1Q16048 86 aa12.08□□□□□ -0.47
TMED3-201ENST00000299705 MIAQ16674 131 aa12.08□□□□□ -0.47
TMED3-201ENST00000299705 NFE4Q86UQ8 179 aa12.08□□□□□ -0.47
TMED3-201ENST00000299705 C6orf223Q8N319 242 aa12.08□□□□□ -0.47
TMED3-201ENST00000299705 SCGB3A1Q96QR1 104 aa12.08□□□□□ -0.47
TMED3-201ENST00000299705 IGLV4-3A0A075B6K6 122 aa12.08□□□□□ -0.48
TMED3-201ENST00000299705 COA6Q5JTJ3 125 aaKnown RBP12.08□□□□□ -0.48
TMED3-201ENST00000299705 C1orf134Q5TEV5 83 aa12.08□□□□□ -0.48
TMED3-201ENST00000299705 Q6ZUT4 128 aa12.08□□□□□ -0.48
TMED3-201ENST00000299705 TMEM141Q96I45 108 aa12.08□□□□□ -0.48
TMED3-201ENST00000299705 KMT2AQ03164 3969 aa12.07□□□□□ -0.48
TMED3-201ENST00000299705 DNAH6Q9C0G6 4158 aa12.07□□□□□ -0.48
TMED3-201ENST00000299705 TRAV8-4A0A0B4J246 113 aa12.07□□□□□ -0.48
TMED3-201ENST00000299705 NUPR1O60356 82 aa12.07□□□□□ -0.48
TMED3-201ENST00000299705 PDZD11Q5EBL8 140 aa12.07□□□□□ -0.48
TMED3-201ENST00000299705 OPRPNQ99935 248 aaPredicted RBP12.07□□□□□ -0.48
TMED3-201ENST00000299705 PAPPA-AS1Q5QFB9 102 aa12.06□□□□□ -0.48
TMED3-201ENST00000299705 CLPSL2Q6UWE3 100 aa12.06□□□□□ -0.48
TMED3-201ENST00000299705 RMI2Q96E14 147 aa12.06□□□□□ -0.48
TMED3-201ENST00000299705 Q9HAA7 133 aa12.06□□□□□ -0.48
TMED3-201ENST00000299705 HYDINQ4G0P3 5121 aa12.06□□□□□ -0.48
TMED3-201ENST00000299705 RYR3Q15413 4870 aa12.05□□□□□ -0.48
TMED3-201ENST00000299705 Q6ZN92 141 aa12.05□□□□□ -0.48
TMED3-201ENST00000299705 FAM19A2Q8N3H0 131 aa12.05□□□□□ -0.48
TMED3-201ENST00000299705 COX11Q9Y6N1 276 aa12.05□□□□□ -0.48
TMED3-201ENST00000299705 RYR2Q92736 4967 aa12.04□□□□□ -0.48
TMED3-201ENST00000299705 NDUFA6P56556 154 aa12.04□□□□□ -0.48
TMED3-201ENST00000299705 RNASE13Q5GAN3 156 aaKnown RBP12.04□□□□□ -0.48
TMED3-201ENST00000299705 AMELXQ99217 191 aa12.04□□□□□ -0.48
TMED3-201ENST00000299705 TM2D2Q9BX73 214 aa12.04□□□□□ -0.48
TMED3-201ENST00000299705 LINC00959A0A1B0GUT2 108 aa12.03□□□□□ -0.48
TMED3-201ENST00000299705 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.03□□□□□ -0.48
TMED3-201ENST00000299705 CCL25O15444 150 aa12.03□□□□□ -0.48
TMED3-201ENST00000299705 ATP5LO75964 103 aa12.03□□□□□ -0.48
TMED3-201ENST00000299705 TEX43Q6ZNM6 134 aa12.03□□□□□ -0.48
TMED3-201ENST00000299705 Q6ZRN7 208 aaPredicted RBP12.03□□□□□ -0.48
TMED3-201ENST00000299705 C1orf43Q9BWL3 253 aa12.03□□□□□ -0.48
TMED3-201ENST00000299705 VCX2Q9H322 139 aa12.03□□□□□ -0.48
TMED3-201ENST00000299705 IGKV3OR2-268A0A0C4DH90 116 aa12.02□□□□□ -0.48
TMED3-201ENST00000299705 SS18Q15532 418 aa12.02□□□□□ -0.49
TMED3-201ENST00000299705 LINC00173Q6ZV60 143 aa12.02□□□□□ -0.49
TMED3-201ENST00000299705 IGKV2D-24A0A075B6R9 120 aa12.01□□□□□ -0.49
TMED3-201ENST00000299705 IFITM10A6NMD0 228 aa12.01□□□□□ -0.49
TMED3-201ENST00000299705 C2orf88Q9BSF0 95 aa12.01□□□□□ -0.49
TMED3-201ENST00000299705 IGLV10-54A0A075B6I4 117 aa12□□□□□ -0.49
TMED3-201ENST00000299705 KRTAP26-1Q6PEX3 210 aa12□□□□□ -0.49
TMED3-201ENST00000299705 BAALCQ8WXS3 180 aa12□□□□□ -0.49
TMED3-201ENST00000299705 TRAV13-1A0A0B4J241 112 aa11.99□□□□□ -0.49
TMED3-201ENST00000299705 RTL8CO15255 209 aa11.99□□□□□ -0.49
TMED3-201ENST00000299705 LEPROTL1O95214 131 aa11.99□□□□□ -0.49
TMED3-201ENST00000299705 PMVKQ15126 192 aa11.99□□□□□ -0.49
TMED3-201ENST00000299705 CHCHD10Q8WYQ3 142 aaPredicted RBP11.99□□□□□ -0.49
TMED3-201ENST00000299705 IFI27L1Q96BM0 104 aa11.98□□□□□ -0.49
TMED3-201ENST00000299705 PSCAO43653 123 aa11.97□□□□□ -0.49
TMED3-201ENST00000299705 UBE2D1P51668 147 aa11.97□□□□□ -0.49
TMED3-201ENST00000299705 ZC2HC1BQ5TFG8 222 aa11.97□□□□□ -0.49
TMED3-201ENST00000299705 PACRGQ96M98 296 aaPredicted RBP11.97□□□□□ -0.49
TMED3-201ENST00000299705 CST9LQ9H4G1 147 aa11.97□□□□□ -0.49
TMED3-201ENST00000299705 HSPB8Q9UJY1 196 aa11.97□□□□□ -0.49
TMED3-201ENST00000299705 S100A6P06703 90 aa11.96□□□□□ -0.49
TMED3-201ENST00000299705 CD164L2Q6UWJ8 174 aa11.96□□□□□ -0.49
TMED3-201ENST00000299705 FAM19A3Q7Z5A8 133 aa11.96□□□□□ -0.49
TMED3-201ENST00000299705 MAPKAPK5-AS1Q8N8E1 139 aa11.95□□□□□ -0.5
TMED3-201ENST00000299705 GAGE12HA6NDE8 117 aa11.95□□□□□ -0.5
TMED3-201ENST00000299705 FABP4P15090 132 aa11.95□□□□□ -0.5
TMED3-201ENST00000299705 XCL1P47992 114 aa11.95□□□□□ -0.5
TMED3-201ENST00000299705 PRSS29PA6NIE9 313 aa11.94□□□□□ -0.5
TMED3-201ENST00000299705 PRSS1P07477 247 aa11.94□□□□□ -0.5
TMED3-201ENST00000299705 SEC11AP67812 179 aa11.94□□□□□ -0.5
TMED3-201ENST00000299705 FOXI1Q12951 378 aa11.94□□□□□ -0.5
TMED3-201ENST00000299705 LINC00242Q5T6M2 205 aa11.94□□□□□ -0.5
TMED3-201ENST00000299705 LINC00336Q6ZUF6 198 aa11.94□□□□□ -0.5
TMED3-201ENST00000299705 TRAV12-1A0A0B4J245 112 aa11.93□□□□□ -0.5
TMED3-201ENST00000299705 IGHV3OR16-9A0A0B4J2B5 98 aa11.91□□□□□ -0.5
TMED3-201ENST00000299705 HIST3H2BBQ8N257 126 aa11.91□□□□□ -0.5
TMED3-201ENST00000299705 DNAH2Q9P225 4427 aa11.91□□□□□ -0.5
TMED3-201ENST00000299705 TINCRA0A1B0GVN0 87 aa11.9□□□□□ -0.5
TMED3-201ENST00000299705 LRCOL1A6NCL2 159 aa11.9□□□□□ -0.5
TMED3-201ENST00000299705 HERVK_113P63121 156 aa11.9□□□□□ -0.5
TMED3-201ENST00000299705 TNP2Q05952 138 aa11.9□□□□□ -0.5
TMED3-201ENST00000299705 MAP1LC3CQ9BXW4 147 aa11.9□□□□□ -0.5
TMED3-201ENST00000299705 A0A0J9YXV3 536 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms