RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 A0A1W2PRX2 142 aa9.86□□□□□ -0.83
CTDP1-202ENST00000299543 LINC01619G3V211 115 aa9.86□□□□□ -0.83
CTDP1-202ENST00000299543 POM121L12Q8N7R1 296 aa9.86□□□□□ -0.83
CTDP1-202ENST00000299543 DYNLRB2Q8TF09 96 aa9.86□□□□□ -0.83
CTDP1-202ENST00000299543 USP24Q9UPU5 2620 aa9.86□□□□□ -0.83
CTDP1-202ENST00000299543 KRTAP10-9P60411 292 aa9.85□□□□□ -0.83
CTDP1-202ENST00000299543 NSUN5P1Q3KNT7 163 aa9.85□□□□□ -0.83
CTDP1-202ENST00000299543 SLC25A29Q8N8R3 303 aa9.85□□□□□ -0.83
CTDP1-202ENST00000299543 DAND5Q8N907 189 aa9.85□□□□□ -0.83
CTDP1-202ENST00000299543 TMEM61Q8N0U2 210 aa9.85□□□□□ -0.83
CTDP1-202ENST00000299543 NOTCH2Q04721 2471 aa9.85□□□□□ -0.83
CTDP1-202ENST00000299543 TRBV10-2A0A0K0K1G8 114 aa9.84□□□□□ -0.83
CTDP1-202ENST00000299543 DSCR9P59020 149 aa9.84□□□□□ -0.83
CTDP1-202ENST00000299543 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.84□□□□□ -0.83
CTDP1-202ENST00000299543 TRBV6-5A0A0K0K1A5 114 aa9.84□□□□□ -0.83
CTDP1-202ENST00000299543 hADV29S1A0JD25 119 aa9.84□□□□□ -0.83
CTDP1-202ENST00000299543 IGKV2-29A2NJV5 120 aaPredicted RBP9.84□□□□□ -0.83
CTDP1-202ENST00000299543 NDUFA7O95182 113 aa9.84□□□□□ -0.83
CTDP1-202ENST00000299543 ZNF702PQ9H963 129 aa9.84□□□□□ -0.83
CTDP1-202ENST00000299543 FN1P02751 2386 aaKnown RBP9.84□□□□□ -0.83
CTDP1-202ENST00000299543 A8MZ25 164 aa9.84□□□□□ -0.83
CTDP1-202ENST00000299543 IGLV4-3A0A075B6K6 122 aa9.83□□□□□ -0.84
CTDP1-202ENST00000299543 UBE2E2Q96LR5 201 aa9.83□□□□□ -0.84
CTDP1-202ENST00000299543 XCL2Q9UBD3 114 aa9.83□□□□□ -0.84
CTDP1-202ENST00000299543 TRAV13-1A0A0B4J241 112 aa9.83□□□□□ -0.84
CTDP1-202ENST00000299543 RHOHQ15669 191 aa9.83□□□□□ -0.84
CTDP1-202ENST00000299543 Q6Q795 121 aa9.83□□□□□ -0.84
CTDP1-202ENST00000299543 TMEM263Q8WUH6 116 aaKnown RBP9.83□□□□□ -0.84
CTDP1-202ENST00000299543 J3KT08 172 aa9.82□□□□□ -0.84
CTDP1-202ENST00000299543 M0R2P5 195 aa9.82□□□□□ -0.84
CTDP1-202ENST00000299543 DNAJC30Q96LL9 226 aa9.82□□□□□ -0.84
CTDP1-202ENST00000299543 Q6ZSN1 163 aa9.82□□□□□ -0.84
CTDP1-202ENST00000299543 OR13C6PQ8NH95 151 aa9.82□□□□□ -0.84
CTDP1-202ENST00000299543 KIR2DL5BQ8NHK3 375 aa9.82□□□□□ -0.84
CTDP1-202ENST00000299543 FLNAP21333 2647 aaKnown RBP9.81□□□□□ -0.84
CTDP1-202ENST00000299543 H7C423 109 aa9.81□□□□□ -0.84
CTDP1-202ENST00000299543 ZNF625Q96I27 306 aaPredicted RBP9.81□□□□□ -0.84
CTDP1-202ENST00000299543 TMEM223A0PJW6 202 aa9.81□□□□□ -0.84
CTDP1-202ENST00000299543 Q6YL49 198 aa9.81□□□□□ -0.84
CTDP1-202ENST00000299543 RBMY1BA6NDE4 496 aaKnown RBP9.8□□□□□ -0.84
CTDP1-202ENST00000299543 RBMY1EA6NEQ0 496 aaKnown RBP9.8□□□□□ -0.84
CTDP1-202ENST00000299543 IGHV3-53P01767 116 aa9.8□□□□□ -0.84
CTDP1-202ENST00000299543 RBMY1DP0C7P1 496 aaKnown RBP9.8□□□□□ -0.84
CTDP1-202ENST00000299543 DGAT2L7PQ6IED9 249 aa9.8□□□□□ -0.84
CTDP1-202ENST00000299543 SMCR5Q8TEV8 140 aa9.8□□□□□ -0.84
CTDP1-202ENST00000299543 AMELXQ99217 191 aa9.8□□□□□ -0.84
CTDP1-202ENST00000299543 TIMM21Q9BVV7 248 aa9.8□□□□□ -0.84
CTDP1-202ENST00000299543 LEPROTO15243 131 aa9.8□□□□□ -0.84
CTDP1-202ENST00000299543 HRCT1Q6UXD1 115 aa9.8□□□□□ -0.84
CTDP1-202ENST00000299543 C3orf22Q8N5N4 141 aa9.8□□□□□ -0.84
CTDP1-202ENST00000299543 IGHV4-31P0DP07 118 aa9.8□□□□□ -0.84
CTDP1-202ENST00000299543 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.79□□□□□ -0.84
CTDP1-202ENST00000299543 IGHV3-30-3P0DP02 117 aa9.79□□□□□ -0.84
CTDP1-202ENST00000299543 DSCR8Q96T75 97 aa9.79□□□□□ -0.84
CTDP1-202ENST00000299543 ITPR3Q14573 2671 aa9.79□□□□□ -0.84
CTDP1-202ENST00000299543 ICOSQ9Y6W8 199 aa9.79□□□□□ -0.84
CTDP1-202ENST00000299543 J3QLI3 93 aa9.78□□□□□ -0.84
CTDP1-202ENST00000299543 Q96MF0 132 aa9.78□□□□□ -0.84
CTDP1-202ENST00000299543 TMEM89A2RUT3 159 aa9.78□□□□□ -0.84
CTDP1-202ENST00000299543 ZNF415Q09FC8 603 aa9.77□□□□□ -0.84
CTDP1-202ENST00000299543 C4orf26Q17RF5 130 aa9.77□□□□□ -0.85
CTDP1-202ENST00000299543 PEMTQ9UBM1 199 aa9.77□□□□□ -0.85
CTDP1-202ENST00000299543 RNF152Q8N8N0 203 aa9.77□□□□□ -0.85
CTDP1-202ENST00000299543 APCP25054 2843 aa9.76□□□□□ -0.85
CTDP1-202ENST00000299543 IGKV3D-7A0A0C4DH55 119 aa9.76□□□□□ -0.85
CTDP1-202ENST00000299543 A0A0J9YXY3 114 aa9.76□□□□□ -0.85
CTDP1-202ENST00000299543 MAP6D1Q9H9H5 199 aa9.76□□□□□ -0.85
CTDP1-202ENST00000299543 SPANXA1Q9NS26 97 aa9.76□□□□□ -0.85
CTDP1-202ENST00000299543 NDUFA12Q9UI09 145 aa9.76□□□□□ -0.85
CTDP1-202ENST00000299543 HIVEP2P31629 2446 aa9.76□□□□□ -0.85
CTDP1-202ENST00000299543 A0A096LNT2 108 aa9.76□□□□□ -0.85
CTDP1-202ENST00000299543 TRGV1A0A0A0MS02 117 aa9.76□□□□□ -0.85
CTDP1-202ENST00000299543 UQCRQO14949 82 aa9.76□□□□□ -0.85
CTDP1-202ENST00000299543 LINC00467Q9BRT7 94 aa9.76□□□□□ -0.85
CTDP1-202ENST00000299543 OXTP01178 125 aa9.75□□□□□ -0.85
CTDP1-202ENST00000299543 BBC3Q96PG8 261 aaPredicted RBP9.75□□□□□ -0.85
CTDP1-202ENST00000299543 F5H768 121 aa9.75□□□□□ -0.85
CTDP1-202ENST00000299543 TRACP01848 142 aa9.74□□□□□ -0.85
CTDP1-202ENST00000299543 SDIM1Q6ZPB5 146 aa9.74□□□□□ -0.85
CTDP1-202ENST00000299543 STHQ8IWL8 128 aa9.74□□□□□ -0.85
CTDP1-202ENST00000299543 ADAMTSL4-AS1Q5T5F5 129 aa9.73□□□□□ -0.85
CTDP1-202ENST00000299543 TRAV25A0A0B4J276 109 aa9.73□□□□□ -0.85
CTDP1-202ENST00000299543 A0A1B0GX51 115 aa9.73□□□□□ -0.85
CTDP1-202ENST00000299543 INSP01308 110 aa9.73□□□□□ -0.85
CTDP1-202ENST00000299543 ZNF469Q96JG9 3925 aaPredicted RBP9.73□□□□□ -0.85
CTDP1-202ENST00000299543 DEFB114Q30KQ6 69 aa9.72□□□□□ -0.85
CTDP1-202ENST00000299543 CDKN2A-AS1Q9UH64 79 aa9.72□□□□□ -0.85
CTDP1-202ENST00000299543 A0A0B4J2C4 111 aa9.71□□□□□ -0.85
CTDP1-202ENST00000299543 HIST1H4AP62805 103 aaKnown RBP9.71□□□□□ -0.85
CTDP1-202ENST00000299543 HIST2H2BCQ6DN03 193 aa9.71□□□□□ -0.85
CTDP1-202ENST00000299543 CHCHD7Q9BUK0 85 aa9.71□□□□□ -0.85
CTDP1-202ENST00000299543 IGKV3OR2-268A0A0C4DH90 116 aa9.71□□□□□ -0.86
CTDP1-202ENST00000299543 TRBV7-7A0A0K0K1E9 115 aa9.71□□□□□ -0.86
CTDP1-202ENST00000299543 DEFB113Q30KQ7 82 aa9.71□□□□□ -0.86
CTDP1-202ENST00000299543 C1orf43Q9BWL3 253 aa9.71□□□□□ -0.86
CTDP1-202ENST00000299543 IGHV1-58A0A0C4DH39 117 aa9.71□□□□□ -0.86
CTDP1-202ENST00000299543 FAM104AQ969W3 186 aa9.71□□□□□ -0.86
CTDP1-202ENST00000299543 UBE2D4Q9Y2X8 147 aa9.71□□□□□ -0.86
CTDP1-202ENST00000299543 NBEAL2Q6ZNJ1 2754 aa9.7□□□□□ -0.86
CTDP1-202ENST00000299543 MRPS36P82909 103 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 161.4 ms