RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 TMEM243Q9BU79 118 aa4.4□□□□□ -1.71
DEPDC4-201ENST00000299185 DAZ3Q9NR90 486 aaKnown RBP4.4□□□□□ -1.71
DEPDC4-201ENST00000299185 A0A096LNJ9 63 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 IGKV3OR2-268A0A0C4DH90 116 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 TRBV27A0A0K0K1C4 114 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 LCE6AA0A183 80 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 SERF1AO75920 110 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 CCL18P55774 89 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 RBX1P62877 108 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 Q0VG73 95 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 COA6Q5JTJ3 125 aaKnown RBP4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 LINC00173Q6ZV60 143 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 FA2HQ7L5A8 372 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 Q8N8P6 123 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 C20orf78Q9BR46 151 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 DNAH6Q9C0G6 4158 aa4.39□□□□□ -1.71
DEPDC4-201ENST00000299185 TRBV25-1A0A075B6N4 114 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 TMEM262E9PQX1 116 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 VCYO14598 125 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 S100A6P06703 90 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 FGF6P10767 208 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 ESDP10768 282 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 NDUFA6P56556 154 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 TIRAPP58753 221 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 RPL32P62910 135 aaKnown RBP4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 PDZD11Q5EBL8 140 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 NIT1Q86X76 327 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 FAM19A2Q8N3H0 131 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 C20orf203Q8NBC4 194 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 PRSS3P2Q8NHM4 247 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 FAM104AQ969W3 186 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 Q9HAA7 133 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 LAMTOR2Q9Y2Q5 125 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 TENM2Q9NT68 2774 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 SACSQ9NZJ4 4579 aa4.38□□□□□ -1.71
DEPDC4-201ENST00000299185 TRAV8-6A0A0B4J262 113 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 KRTAP23-1A1A580 65 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 C5orf52A6NGY3 159 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 PRSS47A8MTI9 375 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 SIVA1O15304 175 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 PPP1R17O96001 155 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 BTF3P20290 206 aaKnown RBP4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 SNRPEP62304 92 aaKnown RBP4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 LGALS9CQ6DKI2 356 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 C2orf66Q6UXQ4 117 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 SH2D6Q7Z4S9 175 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 BAGE3Q86Y29 109 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 KIR2DL4Q99706 377 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 UPK3BQ9BT76 320 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 KLK12Q9UKR0 248 aa4.37□□□□□ -1.71
DEPDC4-201ENST00000299185 CSMD3Q7Z407 3707 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 IGLV10-54A0A075B6I4 117 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 NBDYA0A0U1RRE5 68 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 UBE2L6O14933 153 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 ANGP03950 147 aaKnown RBP4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 DNAH10OSP0CZ25 163 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 TCTAP57738 103 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 LAGE3Q14657 143 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 AMMECR1LQ6DCA0 310 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 UBE2WQ96B02 151 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 Q9H8V8 135 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 NXT2Q9NPJ8 142 aaKnown RBP4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 UBE2D4Q9Y2X8 147 aa4.36□□□□□ -1.71
DEPDC4-201ENST00000299185 IGLV4-3A0A075B6K6 122 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 A0A087WX48 190 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 LINC00614P0C842 121 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 FUSP35637 526 aaKnown RBP eCLIP4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 WFDC2Q14508 124 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 LINC01556Q5JQF7 62 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 Q6ZR54 194 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 LINC00269Q8N2A0 174 aa4.35□□□□□ -1.71
DEPDC4-201ENST00000299185 LINC01546A6NGU7 62 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 HSBP1O75506 76 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 HBDP02042 147 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 ORMDL2Q53FV1 153 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 TMEM97Q5BJF2 176 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 ENHOQ6UWT2 76 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 SPATA12Q7Z6I5 190 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 HIST3H2BBQ8N257 126 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 OR5A1Q8NGJ0 315 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 CHCHD1Q96BP2 118 aaKnown RBP4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 PACRGQ96M98 296 aaPredicted RBP4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 CYSLTR1Q9Y271 337 aa4.34□□□□□ -1.71
DEPDC4-201ENST00000299185 TRAV13-1A0A0B4J241 112 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 LOC105371267A0A1B0GV96 52 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 IFITM10A6NMD0 228 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 H0Y8G0 127 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 K7EMI3 77 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 LECT2O14960 151 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 FABP4P15090 132 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 REG3AQ06141 175 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 MRPL52Q86TS9 123 aaKnown RBP4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 TOMM6Q96B49 74 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 SCGB3A1Q96QR1 104 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 SPANXA1Q9NS26 97 aa4.33□□□□□ -1.72
DEPDC4-201ENST00000299185 IGKV2D-24A0A075B6R9 120 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 IGIPA6NJ69 53 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 RTL8CO15255 209 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 CRPP02741 224 aa4.32□□□□□ -1.72
DEPDC4-201ENST00000299185 S100A2P29034 98 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms