RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 PAPPA-AS1Q5QFB9 102 aa16.91■□□□□ 0.3
GTF2A1-201ENST00000298173 A0A1B0GUV1 79 aa16.9■□□□□ 0.3
GTF2A1-201ENST00000298173 DGAT2L7PQ6IED9 249 aa16.9■□□□□ 0.3
GTF2A1-201ENST00000298173 CDC42SE2Q9NRR3 84 aa16.9■□□□□ 0.3
GTF2A1-201ENST00000298173 AMMECR1LQ6DCA0 310 aa16.89■□□□□ 0.29
GTF2A1-201ENST00000298173 CDPF1Q6NVV7 123 aa16.89■□□□□ 0.29
GTF2A1-201ENST00000298173 Q6ZUT4 128 aa16.89■□□□□ 0.29
GTF2A1-201ENST00000298173 PMCHL2Q9BQD1 86 aa16.89■□□□□ 0.29
GTF2A1-201ENST00000298173 VCX2Q9H322 139 aa16.89■□□□□ 0.29
GTF2A1-201ENST00000298173 DNAH7Q8WXX0 4024 aa16.89■□□□□ 0.29
GTF2A1-201ENST00000298173 C20orf202A1L168 122 aa16.88■□□□□ 0.29
GTF2A1-201ENST00000298173 OR5A1Q8NGJ0 315 aa16.88■□□□□ 0.29
GTF2A1-201ENST00000298173 IGLV4-60A0A075B6I1 120 aa16.87■□□□□ 0.29
GTF2A1-201ENST00000298173 LINC00518Q8N0U6 118 aa16.87■□□□□ 0.29
GTF2A1-201ENST00000298173 ZNF664Q8N3J9 261 aa16.87■□□□□ 0.29
GTF2A1-201ENST00000298173 TMEM101Q96IK0 257 aa16.87■□□□□ 0.29
GTF2A1-201ENST00000298173 TMEM262E9PQX1 116 aa16.86■□□□□ 0.29
GTF2A1-201ENST00000298173 MRPL35Q9NZE8 188 aaKnown RBP16.86■□□□□ 0.29
GTF2A1-201ENST00000298173 RBX1P62877 108 aa16.85■□□□□ 0.29
GTF2A1-201ENST00000298173 MPV17L2Q567V2 206 aa16.85■□□□□ 0.29
GTF2A1-201ENST00000298173 RNASE13Q5GAN3 156 aaKnown RBP16.85■□□□□ 0.29
GTF2A1-201ENST00000298173 TEX43Q6ZNM6 134 aa16.85■□□□□ 0.29
GTF2A1-201ENST00000298173 CHTOPQ9Y3Y2 248 aaKnown RBP16.85■□□□□ 0.29
GTF2A1-201ENST00000298173 CSMD3Q7Z407 3707 aa16.85■□□□□ 0.29
GTF2A1-201ENST00000298173 F8VRH5 84 aa16.85■□□□□ 0.29
GTF2A1-201ENST00000298173 TRAV8-6A0A0B4J262 113 aa16.84■□□□□ 0.29
GTF2A1-201ENST00000298173 APLNQ9ULZ1 77 aa16.84■□□□□ 0.29
GTF2A1-201ENST00000298173 NUPR2A6NF83 97 aa16.83■□□□□ 0.28
GTF2A1-201ENST00000298173 C12orf57Q99622 126 aa16.83■□□□□ 0.28
GTF2A1-201ENST00000298173 PKIAP61925 76 aa16.82■□□□□ 0.28
GTF2A1-201ENST00000298173 ATOH7Q8N100 152 aa16.82■□□□□ 0.28
GTF2A1-201ENST00000298173 IGLV4-69A0A075B6H9 119 aa16.81■□□□□ 0.28
GTF2A1-201ENST00000298173 Q8N3U1 123 aa16.81■□□□□ 0.28
GTF2A1-201ENST00000298173 DPM2O94777 84 aa16.8■□□□□ 0.28
GTF2A1-201ENST00000298173 WFDC10BQ8IUB3 73 aa16.8■□□□□ 0.28
GTF2A1-201ENST00000298173 LINC00588Q9Y4M8 146 aa16.8■□□□□ 0.28
GTF2A1-201ENST00000298173 IGKCP01834 107 aa16.79■□□□□ 0.28
GTF2A1-201ENST00000298173 KLK5Q9Y337 293 aaPredicted RBP16.79■□□□□ 0.28
GTF2A1-201ENST00000298173 UBE2D1P51668 147 aa16.78■□□□□ 0.28
GTF2A1-201ENST00000298173 C2orf88Q9BSF0 95 aa16.78■□□□□ 0.28
GTF2A1-201ENST00000298173 PLNP26678 52 aa16.78■□□□□ 0.28
GTF2A1-201ENST00000298173 NFE4Q86UQ8 179 aa16.78■□□□□ 0.28
GTF2A1-201ENST00000298173 IGLC3P0DOY3 106 aa16.77■□□□□ 0.28
GTF2A1-201ENST00000298173 CCL18P55774 89 aa16.77■□□□□ 0.28
GTF2A1-201ENST00000298173 FAM19A3Q7Z5A8 133 aa16.77■□□□□ 0.28
GTF2A1-201ENST00000298173 MRPS16Q9Y3D3 137 aaKnown RBP16.77■□□□□ 0.28
GTF2A1-201ENST00000298173 A0A0J9YXV3 536 aa16.76■□□□□ 0.27
GTF2A1-201ENST00000298173 TCTAP57738 103 aa16.76■□□□□ 0.27
GTF2A1-201ENST00000298173 TRAV9-2A0A087WT02 112 aa16.75■□□□□ 0.27
GTF2A1-201ENST00000298173 C11orf86A6NJI1 115 aa16.75■□□□□ 0.27
GTF2A1-201ENST00000298173 MAJINQ3KP22 176 aa16.75■□□□□ 0.27
GTF2A1-201ENST00000298173 UPK3BQ9BT76 320 aa16.74■□□□□ 0.27
GTF2A1-201ENST00000298173 PLECQ15149 4684 aaKnown RBP16.74■□□□□ 0.27
GTF2A1-201ENST00000298173 TGP01266 2768 aa16.74■□□□□ 0.27
GTF2A1-201ENST00000298173 TINCRA0A1B0GVN0 87 aa16.73■□□□□ 0.27
GTF2A1-201ENST00000298173 STARD9Q9P2P6 4700 aa16.73■□□□□ 0.27
GTF2A1-201ENST00000298173 TRAV13-1A0A0B4J241 112 aa16.72■□□□□ 0.27
GTF2A1-201ENST00000298173 hDV102S1A0JD36 115 aa16.72■□□□□ 0.27
GTF2A1-201ENST00000298173 S100A12P80511 92 aa16.72■□□□□ 0.27
GTF2A1-201ENST00000298173 LINC00242Q5T6M2 205 aa16.72■□□□□ 0.27
GTF2A1-201ENST00000298173 ANGP03950 147 aaKnown RBP16.72■□□□□ 0.27
GTF2A1-201ENST00000298173 LINC01556Q5JQF7 62 aa16.72■□□□□ 0.27
GTF2A1-201ENST00000298173 LINC00269Q8N2A0 174 aa16.72■□□□□ 0.27
GTF2A1-201ENST00000298173 VAMP8Q9BV40 100 aa16.72■□□□□ 0.27
GTF2A1-201ENST00000298173 DNAH10OSP0CZ25 163 aa16.71■□□□□ 0.27
GTF2A1-201ENST00000298173 STPG4Q8N801 248 aa16.71■□□□□ 0.27
GTF2A1-201ENST00000298173 CHAC1Q9BUX1 264 aa16.71■□□□□ 0.27
GTF2A1-201ENST00000298173 IGHV3-30P01768 117 aa16.7■□□□□ 0.26
GTF2A1-201ENST00000298173 IGHV3-33P01772 117 aa16.7■□□□□ 0.26
GTF2A1-201ENST00000298173 IGHV3-30-3P0DP02 117 aa16.7■□□□□ 0.26
GTF2A1-201ENST00000298173 IGHV3-30-5P0DP03 117 aa16.7■□□□□ 0.26
GTF2A1-201ENST00000298173 MUC7Q8TAX7 377 aa16.7■□□□□ 0.26
GTF2A1-201ENST00000298173 PRR34Q9NV39 138 aa16.7■□□□□ 0.26
GTF2A1-201ENST00000298173 LINC00959A0A1B0GUT2 108 aa16.69■□□□□ 0.26
GTF2A1-201ENST00000298173 WWC2-AS2Q96NR7 200 aa16.69■□□□□ 0.26
GTF2A1-201ENST00000298173 PAM16Q9Y3D7 125 aa16.69■□□□□ 0.26
GTF2A1-201ENST00000298173 COX6A2Q02221 97 aa16.69■□□□□ 0.26
GTF2A1-201ENST00000298173 REG3AQ06141 175 aa16.69■□□□□ 0.26
GTF2A1-201ENST00000298173 KLK12Q9UKR0 248 aa16.69■□□□□ 0.26
GTF2A1-201ENST00000298173 IGLV5-45A0A087WSX0 123 aa16.68■□□□□ 0.26
GTF2A1-201ENST00000298173 ZNF22P17026 224 aaPredicted RBP16.68■□□□□ 0.26
GTF2A1-201ENST00000298173 SEC11AP67812 179 aa16.68■□□□□ 0.26
GTF2A1-201ENST00000298173 ZFAND6Q6FIF0 208 aa16.68■□□□□ 0.26
GTF2A1-201ENST00000298173 IGKV3OR2-268A0A0C4DH90 116 aa16.67■□□□□ 0.26
GTF2A1-201ENST00000298173 SIVA1O15304 175 aa16.67■□□□□ 0.26
GTF2A1-201ENST00000298173 CCL25O15444 150 aa16.66■□□□□ 0.26
GTF2A1-201ENST00000298173 HERVK_113P63121 156 aa16.66■□□□□ 0.26
GTF2A1-201ENST00000298173 HSBP1L1C9JCN9 74 aa16.65■□□□□ 0.26
GTF2A1-201ENST00000298173 SPATA45Q537H7 98 aa16.65■□□□□ 0.26
GTF2A1-201ENST00000298173 ANKRD39Q53RE8 183 aa16.65■□□□□ 0.26
GTF2A1-201ENST00000298173 CLPSL2Q6UWE3 100 aa16.65■□□□□ 0.26
GTF2A1-201ENST00000298173 ENHOQ6UWT2 76 aa16.65■□□□□ 0.26
GTF2A1-201ENST00000298173 TMEM170BQ5T4T1 132 aa16.65■□□□□ 0.26
GTF2A1-201ENST00000298173 GEMIN7Q9H840 131 aaKnown RBP16.65■□□□□ 0.26
GTF2A1-201ENST00000298173 SS18Q15532 418 aa16.63■□□□□ 0.25
GTF2A1-201ENST00000298173 Q9H8V8 135 aa16.63■□□□□ 0.25
GTF2A1-201ENST00000298173 CDKN2A-AS1Q9UH64 79 aa16.63■□□□□ 0.25
GTF2A1-201ENST00000298173 LYSTQ99698 3801 aa16.62■□□□□ 0.25
GTF2A1-201ENST00000298173 TMEM223A0PJW6 202 aa16.62■□□□□ 0.25
GTF2A1-201ENST00000298173 IGHV3OR16-9A0A0B4J2B5 98 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 104.1 ms