RNA–Protein interactions for RNA: ENST00000296215.7

SNIP1-201, Transcript of Smad nuclear interacting protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNIP1, Length 4,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-201ENST00000296215 HIGD2AQ9BW72 106 aa8.65□□□□□ -1.02
SNIP1-201ENST00000296215 PINLYPA6NC86 204 aa8.65□□□□□ -1.03
SNIP1-201ENST00000296215 DEFB105AQ8NG35 78 aa8.65□□□□□ -1.03
SNIP1-201ENST00000296215 EML5Q05BV3 1969 aa8.64□□□□□ -1.03
SNIP1-201ENST00000296215 TRAV10A0A0B4J240 114 aa8.64□□□□□ -1.03
SNIP1-201ENST00000296215 LY6LH3BQJ8 138 aa8.64□□□□□ -1.03
SNIP1-201ENST00000296215 TMEM105Q8N8V8 129 aa8.64□□□□□ -1.03
SNIP1-201ENST00000296215 TRBV6-5A0A0K0K1A5 114 aa8.64□□□□□ -1.03
SNIP1-201ENST00000296215 FP248Q71RG6 208 aaPredicted RBP8.64□□□□□ -1.03
SNIP1-201ENST00000296215 ATP11AUNQ6ZP68 121 aa8.64□□□□□ -1.03
SNIP1-201ENST00000296215 C11orf45Q8TAV5 145 aa8.63□□□□□ -1.03
SNIP1-201ENST00000296215 C11orf21Q9P2W6 132 aa8.63□□□□□ -1.03
SNIP1-201ENST00000296215 ADAMTS9Q9P2N4 1935 aa8.63□□□□□ -1.03
SNIP1-201ENST00000296215 NUP210LQ5VU65 1888 aa8.63□□□□□ -1.03
SNIP1-201ENST00000296215 IGHV4OR15-8A0A075B7B6 117 aa8.63□□□□□ -1.03
SNIP1-201ENST00000296215 A0A087WW49 117 aa8.63□□□□□ -1.03
SNIP1-201ENST00000296215 TM2D3Q9BRN9 247 aa8.63□□□□□ -1.03
SNIP1-201ENST00000296215 CTSGP08311 255 aa8.63□□□□□ -1.03
SNIP1-201ENST00000296215 C2CD3Q4AC94 2353 aa8.63□□□□□ -1.03
SNIP1-201ENST00000296215 C1orf229Q6ZS94 237 aaPredicted RBP8.62□□□□□ -1.03
SNIP1-201ENST00000296215 PSMG3-AS1Q96PY0 264 aa8.62□□□□□ -1.03
SNIP1-201ENST00000296215 ZNF706Q9Y5V0 76 aaPredicted RBP8.62□□□□□ -1.03
SNIP1-201ENST00000296215 IGLV2-23P01705 113 aa8.62□□□□□ -1.03
SNIP1-201ENST00000296215 RNASE6Q93091 150 aaKnown RBP8.61□□□□□ -1.03
SNIP1-201ENST00000296215 TMEM131Q92545 1883 aa8.61□□□□□ -1.03
SNIP1-201ENST00000296215 PATE3B3GLJ2 98 aa8.61□□□□□ -1.03
SNIP1-201ENST00000296215 C6orf99Q4VX62 202 aa8.61□□□□□ -1.03
SNIP1-201ENST00000296215 IGHV3OR16-10A0A075B7F0 116 aa8.61□□□□□ -1.03
SNIP1-201ENST00000296215 C1orf158Q8N1D5 194 aa8.6□□□□□ -1.03
SNIP1-201ENST00000296215 LYPD2Q6UXB3 125 aa8.6□□□□□ -1.03
SNIP1-201ENST00000296215 LY6EQ16553 131 aa8.6□□□□□ -1.03
SNIP1-201ENST00000296215 PRM2P04554 102 aa8.6□□□□□ -1.03
SNIP1-201ENST00000296215 NUP210Q8TEM1 1887 aaPredicted RBP8.59□□□□□ -1.03
SNIP1-201ENST00000296215 TRAV22A0A0B4J277 110 aa8.59□□□□□ -1.03
SNIP1-201ENST00000296215 ZNF672Q499Z4 452 aaPredicted RBP8.59□□□□□ -1.03
SNIP1-201ENST00000296215 Q6ZRU5 148 aa8.59□□□□□ -1.03
SNIP1-201ENST00000296215 IGF1P05019 195 aa8.59□□□□□ -1.03
SNIP1-201ENST00000296215 M0QY20 66 aa8.58□□□□□ -1.04
SNIP1-201ENST00000296215 TSHBP01222 138 aa8.58□□□□□ -1.04
SNIP1-201ENST00000296215 Q8N2B8 174 aa8.58□□□□□ -1.04
SNIP1-201ENST00000296215 IGLV11-55A0A075B6I3 123 aa8.58□□□□□ -1.04
SNIP1-201ENST00000296215 C3orf84H3BNL1 204 aa8.58□□□□□ -1.04
SNIP1-201ENST00000296215 M0R378 163 aa8.58□□□□□ -1.04
SNIP1-201ENST00000296215 Q6ZQY7 126 aa8.58□□□□□ -1.04
SNIP1-201ENST00000296215 IBA57-AS1B1ANH7 110 aa8.58□□□□□ -1.04
SNIP1-201ENST00000296215 FAM218AQ96MZ4 157 aa8.58□□□□□ -1.04
SNIP1-201ENST00000296215 PTPRBP23467 1997 aa8.57□□□□□ -1.04
SNIP1-201ENST00000296215 OVOL3O00110 214 aa8.57□□□□□ -1.04
SNIP1-201ENST00000296215 LINC00208Q96KT6 92 aa8.57□□□□□ -1.04
SNIP1-201ENST00000296215 DEFB1P60022 68 aa8.57□□□□□ -1.04
SNIP1-201ENST00000296215 B9D2Q9BPU9 175 aa8.57□□□□□ -1.04
SNIP1-201ENST00000296215 RETNLBQ9BQ08 111 aa8.57□□□□□ -1.04
SNIP1-201ENST00000296215 TRBV6-8A0A0A6YYG3 113 aa8.57□□□□□ -1.04
SNIP1-201ENST00000296215 Q8N814 137 aa8.57□□□□□ -1.04
SNIP1-201ENST00000296215 Q6ZTI0 123 aa8.57□□□□□ -1.04
SNIP1-201ENST00000296215 LINC00467Q9BRT7 94 aa8.57□□□□□ -1.04
SNIP1-201ENST00000296215 PRRC2AP48634 2157 aaKnown RBP8.56□□□□□ -1.04
SNIP1-201ENST00000296215 C9orf106Q8NAJ2 232 aa8.56□□□□□ -1.04
SNIP1-201ENST00000296215 FSTL3O95633 263 aa8.56□□□□□ -1.04
SNIP1-201ENST00000296215 MINOS1Q5TGZ0 78 aa8.56□□□□□ -1.04
SNIP1-201ENST00000296215 NAV3Q8IVL0 2385 aa8.56□□□□□ -1.04
SNIP1-201ENST00000296215 CDK2AP2O75956 126 aa8.56□□□□□ -1.04
SNIP1-201ENST00000296215 ATP6V0E1O15342 81 aa8.55□□□□□ -1.04
SNIP1-201ENST00000296215 PTPRQQ9UMZ3 2332 aa8.55□□□□□ -1.04
SNIP1-201ENST00000296215 IGHV4-30-2A0A087WSY4 118 aa8.55□□□□□ -1.04
SNIP1-201ENST00000296215 G3V318 75 aa8.55□□□□□ -1.04
SNIP1-201ENST00000296215 GPHB5Q86YW7 130 aa8.55□□□□□ -1.04
SNIP1-201ENST00000296215 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.55□□□□□ -1.04
SNIP1-201ENST00000296215 NDUFA4O00483 81 aa8.55□□□□□ -1.04
SNIP1-201ENST00000296215 C8orf87E5RJ46 101 aa8.54□□□□□ -1.04
SNIP1-201ENST00000296215 CCL18P55774 89 aa8.54□□□□□ -1.04
SNIP1-201ENST00000296215 C6orf223Q8N319 242 aa8.54□□□□□ -1.04
SNIP1-201ENST00000296215 CYP4F30PQ9H0H9 118 aa8.54□□□□□ -1.04
SNIP1-201ENST00000296215 EPOPA6NHQ4 379 aa8.54□□□□□ -1.04
SNIP1-201ENST00000296215 COX8CQ7Z4L0 72 aa8.54□□□□□ -1.04
SNIP1-201ENST00000296215 THSD7BQ9C0I4 1608 aa8.54□□□□□ -1.04
SNIP1-201ENST00000296215 DNAJC9-AS1A6NH13 148 aa8.53□□□□□ -1.04
SNIP1-201ENST00000296215 LYNX1G3V0Z9 82 aa8.53□□□□□ -1.04
SNIP1-201ENST00000296215 LYNX1P0DP58 116 aa8.53□□□□□ -1.04
SNIP1-201ENST00000296215 COX7BP24311 80 aa8.53□□□□□ -1.04
SNIP1-201ENST00000296215 ETDCA0A1B0GVM5 59 aa8.53□□□□□ -1.04
SNIP1-201ENST00000296215 LINC01600Q96MT4 127 aa8.53□□□□□ -1.04
SNIP1-201ENST00000296215 PTPRSQ13332 1948 aa8.52□□□□□ -1.05
SNIP1-201ENST00000296215 CCL24O00175 119 aa8.52□□□□□ -1.05
SNIP1-201ENST00000296215 CGB3P0DN86 165 aa8.52□□□□□ -1.05
SNIP1-201ENST00000296215 CGB7P0DN87 165 aa8.52□□□□□ -1.05
SNIP1-201ENST00000296215 C9orf116Q5BN46 136 aaPredicted RBP8.52□□□□□ -1.05
SNIP1-201ENST00000296215 WFDC10BQ8IUB3 73 aa8.52□□□□□ -1.05
SNIP1-201ENST00000296215 ZNF843Q8N446 348 aa8.52□□□□□ -1.05
SNIP1-201ENST00000296215 LYPD5Q6UWN5 251 aa8.52□□□□□ -1.05
SNIP1-201ENST00000296215 SMAD5-AS1Q9Y6J3 95 aa8.52□□□□□ -1.05
SNIP1-201ENST00000296215 USMG5Q96IX5 58 aa8.51□□□□□ -1.05
SNIP1-201ENST00000296215 CACNA1AO00555 2505 aa8.51□□□□□ -1.05
SNIP1-201ENST00000296215 RNASE3P12724 160 aaKnown RBP8.51□□□□□ -1.05
SNIP1-201ENST00000296215 CLPSL2Q6UWE3 100 aa8.51□□□□□ -1.05
SNIP1-201ENST00000296215 ZFAND2AQ8N6M9 145 aa8.51□□□□□ -1.05
SNIP1-201ENST00000296215 Q8N9L7 120 aa8.51□□□□□ -1.05
SNIP1-201ENST00000296215 PLXNB2O15031 1838 aa8.51□□□□□ -1.05
SNIP1-201ENST00000296215 ERC2-IT1O76042 136 aa8.51□□□□□ -1.05
SNIP1-201ENST00000296215 C1orf64Q8NEQ6 169 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms