RNA–Protein interactions for RNA: ENST00000295522.3

CLDN1-201, Transcript of claudin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLDN1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN1-201ENST00000295522 HILS1P60008 231 aa7.46□□□□□ -1.22
CLDN1-201ENST00000295522 LINC00467Q9BRT7 94 aa7.46□□□□□ -1.22
CLDN1-201ENST00000295522 TMEM243Q9BU79 118 aa7.46□□□□□ -1.22
CLDN1-201ENST00000295522 CXCL5P42830 114 aa7.46□□□□□ -1.22
CLDN1-201ENST00000295522 FAM223AQ8IWN6 122 aa7.46□□□□□ -1.22
CLDN1-201ENST00000295522 MINOS1-NBL1R4GNA1 71 aa7.46□□□□□ -1.22
CLDN1-201ENST00000295522 CELSR1Q9NYQ6 3014 aa7.46□□□□□ -1.22
CLDN1-201ENST00000295522 NBL1P41271 181 aa7.45□□□□□ -1.22
CLDN1-201ENST00000295522 LINC00846Q9NV44 126 aa7.45□□□□□ -1.22
CLDN1-201ENST00000295522 IGHV3OR16-12A0A075B7B8 117 aa7.45□□□□□ -1.22
CLDN1-201ENST00000295522 NDUFA4O00483 81 aa7.45□□□□□ -1.22
CLDN1-201ENST00000295522 OXTP01178 125 aa7.45□□□□□ -1.22
CLDN1-201ENST00000295522 GHRHP01286 108 aa7.45□□□□□ -1.22
CLDN1-201ENST00000295522 C5orf38Q86SI9 138 aa7.45□□□□□ -1.22
CLDN1-201ENST00000295522 LECT2O14960 151 aa7.44□□□□□ -1.22
CLDN1-201ENST00000295522 SNRPD3P62318 126 aaKnown RBP7.44□□□□□ -1.22
CLDN1-201ENST00000295522 C11orf68Q9H3H3 251 aaKnown RBP7.44□□□□□ -1.22
CLDN1-201ENST00000295522 MYO9AB2RTY4 2548 aa7.44□□□□□ -1.22
CLDN1-201ENST00000295522 SOSTDC1Q6X4U4 206 aa7.44□□□□□ -1.22
CLDN1-201ENST00000295522 SETD2Q9BYW2 2564 aaPredicted RBP7.44□□□□□ -1.22
CLDN1-201ENST00000295522 COL27A1Q8IZC6 1860 aaPredicted RBP7.44□□□□□ -1.22
CLDN1-201ENST00000295522 KLLNB2CW77 178 aa7.44□□□□□ -1.22
CLDN1-201ENST00000295522 LINC00158P58513 81 aa7.44□□□□□ -1.22
CLDN1-201ENST00000295522 COX6A2Q02221 97 aa7.44□□□□□ -1.22
CLDN1-201ENST00000295522 C9orf129Q5T035 196 aaKnown RBP7.44□□□□□ -1.22
CLDN1-201ENST00000295522 WFDC11Q8NEX6 87 aa7.44□□□□□ -1.22
CLDN1-201ENST00000295522 PYGO1Q9Y3Y4 419 aa7.44□□□□□ -1.22
CLDN1-201ENST00000295522 SOCS3O14543 225 aa7.43□□□□□ -1.22
CLDN1-201ENST00000295522 PRB1P04280 392 aa7.43□□□□□ -1.22
CLDN1-201ENST00000295522 RPS28P62857 69 aaKnown RBP7.43□□□□□ -1.22
CLDN1-201ENST00000295522 SONP18583 2426 aaKnown RBP7.43□□□□□ -1.22
CLDN1-201ENST00000295522 PFN2P35080 140 aa7.43□□□□□ -1.22
CLDN1-201ENST00000295522 C19orf54Q5BKX5 351 aa7.43□□□□□ -1.22
CLDN1-201ENST00000295522 Q8NA96 180 aa7.43□□□□□ -1.22
CLDN1-201ENST00000295522 A0A087WYN8 130 aa7.42□□□□□ -1.22
CLDN1-201ENST00000295522 RBMY1BA6NDE4 496 aaKnown RBP7.42□□□□□ -1.22
CLDN1-201ENST00000295522 RBMY1EA6NEQ0 496 aaKnown RBP7.42□□□□□ -1.22
CLDN1-201ENST00000295522 FAM223BA6NKX1 122 aa7.42□□□□□ -1.22
CLDN1-201ENST00000295522 NDUFA1O15239 70 aa7.42□□□□□ -1.22
CLDN1-201ENST00000295522 RBMY1DP0C7P1 496 aaKnown RBP7.42□□□□□ -1.22
CLDN1-201ENST00000295522 RBMY1A1P0DJD3 496 aaKnown RBP7.42□□□□□ -1.22
CLDN1-201ENST00000295522 RBMY1CP0DJD4 496 aa7.42□□□□□ -1.22
CLDN1-201ENST00000295522 RBMY1FQ15415 496 aaKnown RBP7.42□□□□□ -1.22
CLDN1-201ENST00000295522 COPS9Q8WXC6 57 aa7.42□□□□□ -1.22
CLDN1-201ENST00000295522 PAX4O43316 350 aa7.42□□□□□ -1.22
CLDN1-201ENST00000295522 RPL36AP83881 106 aaKnown RBP7.42□□□□□ -1.22
CLDN1-201ENST00000295522 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.42□□□□□ -1.22
CLDN1-201ENST00000295522 C5orf56Q8N8D9 126 aa7.42□□□□□ -1.22
CLDN1-201ENST00000295522 RPL36ALQ969Q0 106 aaKnown RBP7.42□□□□□ -1.22
CLDN1-201ENST00000295522 LINC01600Q96MT4 127 aa7.42□□□□□ -1.22
CLDN1-201ENST00000295522 A0A0U1RQV1 116 aa7.42□□□□□ -1.22
CLDN1-201ENST00000295522 IGHV3-53P01767 116 aa7.42□□□□□ -1.22
CLDN1-201ENST00000295522 KHDC1LQ5JSQ8 128 aa7.42□□□□□ -1.22
CLDN1-201ENST00000295522 FHL2Q14192 279 aa7.41□□□□□ -1.22
CLDN1-201ENST00000295522 C9orf85Q96MD7 179 aa7.41□□□□□ -1.22
CLDN1-201ENST00000295522 UBE2D4Q9Y2X8 147 aa7.41□□□□□ -1.22
CLDN1-201ENST00000295522 MOB4Q9Y3A3 225 aa7.41□□□□□ -1.22
CLDN1-201ENST00000295522 USP9YO00507 2555 aaPredicted RBP7.41□□□□□ -1.22
CLDN1-201ENST00000295522 HIST2H2BCQ6DN03 193 aa7.41□□□□□ -1.22
CLDN1-201ENST00000295522 HIST2H2BDQ6DRA6 164 aa7.41□□□□□ -1.22
CLDN1-201ENST00000295522 BLCAPP62952 87 aa7.4□□□□□ -1.22
CLDN1-201ENST00000295522 ENHOQ6UWT2 76 aa7.4□□□□□ -1.22
CLDN1-201ENST00000295522 SND1-IT1Q9HBX3 110 aa7.4□□□□□ -1.22
CLDN1-201ENST00000295522 ACACBO00763 2458 aa7.4□□□□□ -1.22
CLDN1-201ENST00000295522 HIVEP3Q5T1R4 2406 aa7.4□□□□□ -1.22
CLDN1-201ENST00000295522 CACNA1AO00555 2505 aa7.4□□□□□ -1.22
CLDN1-201ENST00000295522 IGHG2P01859 326 aa7.4□□□□□ -1.22
CLDN1-201ENST00000295522 CDSNQ15517 529 aa7.4□□□□□ -1.22
CLDN1-201ENST00000295522 MIR7-3HGQ8N6C7 128 aa7.4□□□□□ -1.22
CLDN1-201ENST00000295522 Q6ZSN1 163 aa7.4□□□□□ -1.23
CLDN1-201ENST00000295522 LINC01561Q8N1V8 128 aa7.4□□□□□ -1.23
CLDN1-201ENST00000295522 FAM208BQ5VWN6 2430 aa7.39□□□□□ -1.23
CLDN1-201ENST00000295522 PTPN13Q12923 2485 aa7.39□□□□□ -1.23
CLDN1-201ENST00000295522 FAM19A1Q7Z5A9 133 aa7.39□□□□□ -1.23
CLDN1-201ENST00000295522 PIMREGQ9BSJ6 248 aa7.39□□□□□ -1.23
CLDN1-201ENST00000295522 RPL35AP18077 110 aaKnown RBP7.39□□□□□ -1.23
CLDN1-201ENST00000295522 H3BUX3 64 aa7.38□□□□□ -1.23
CLDN1-201ENST00000295522 SNURFQ9Y675 71 aa7.38□□□□□ -1.23
CLDN1-201ENST00000295522 TRAV13-2A0A0B4J235 113 aa7.38□□□□□ -1.23
CLDN1-201ENST00000295522 FAM236DA0A1B0GTK5 79 aa7.38□□□□□ -1.23
CLDN1-201ENST00000295522 TIMM17BO60830 172 aa7.38□□□□□ -1.23
CLDN1-201ENST00000295522 FAM236CP0DP71 79 aa7.38□□□□□ -1.23
CLDN1-201ENST00000295522 CHCHD7Q9BUK0 85 aa7.38□□□□□ -1.23
CLDN1-201ENST00000295522 JMJD1CQ15652 2540 aa7.38□□□□□ -1.23
CLDN1-201ENST00000295522 ZFYVE26Q68DK2 2539 aa7.38□□□□□ -1.23
CLDN1-201ENST00000295522 SIRPDQ9H106 197 aa7.37□□□□□ -1.23
CLDN1-201ENST00000295522 TLN2Q9Y4G6 2542 aa7.37□□□□□ -1.23
CLDN1-201ENST00000295522 CFHR3Q02985 330 aa7.37□□□□□ -1.23
CLDN1-201ENST00000295522 SMIM11BQ8TCY0 68 aa7.37□□□□□ -1.23
CLDN1-201ENST00000295522 FAM104AQ969W3 186 aa7.37□□□□□ -1.23
CLDN1-201ENST00000295522 BPESC1Q9GZL8 116 aa7.37□□□□□ -1.23
CLDN1-201ENST00000295522 Q5XG85 94 aa7.37□□□□□ -1.23
CLDN1-201ENST00000295522 Q6JHZ5 121 aa7.37□□□□□ -1.23
CLDN1-201ENST00000295522 LINC00336Q6ZUF6 198 aa7.37□□□□□ -1.23
CLDN1-201ENST00000295522 BRK1Q8WUW1 75 aa7.37□□□□□ -1.23
CLDN1-201ENST00000295522 WIPF1O43516 503 aa7.36□□□□□ -1.23
CLDN1-201ENST00000295522 APRG1Q8IVJ8 170 aa7.36□□□□□ -1.23
CLDN1-201ENST00000295522 LINC00337Q8N6G1 96 aa7.36□□□□□ -1.23
CLDN1-201ENST00000295522 RPL28P46779 137 aaKnown RBP7.36□□□□□ -1.23
CLDN1-201ENST00000295522 LINC00242Q5T6M2 205 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms