RNA–Protein interactions for RNA: ENST00000268049.11

USP3-201, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 5,311 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-201ENST00000268049 NAV3Q8IVL0 2385 aa5.91□□□□□ -1.46
USP3-201ENST00000268049 LRRK2Q5S007 2527 aa5.91□□□□□ -1.46
USP3-201ENST00000268049 SEC61GP60059 68 aa5.91□□□□□ -1.46
USP3-201ENST00000268049 C9orf47Q6ZRZ4 202 aa5.91□□□□□ -1.46
USP3-201ENST00000268049 TPSG1Q9NRR2 321 aa5.91□□□□□ -1.46
USP3-201ENST00000268049 TP73-AS1Q9UF72 201 aa5.91□□□□□ -1.46
USP3-201ENST00000268049 TRBV10-1A0A0K0K1A3 114 aa5.91□□□□□ -1.46
USP3-201ENST00000268049 FAM19A5Q7Z5A7 132 aaPredicted RBP5.91□□□□□ -1.46
USP3-201ENST00000268049 A0A0J9YXV3 536 aa5.9□□□□□ -1.46
USP3-201ENST00000268049 MLST8Q9BVC4 326 aa5.9□□□□□ -1.46
USP3-201ENST00000268049 DYSFO75923 2080 aa5.9□□□□□ -1.46
USP3-201ENST00000268049 SPAG11BQ08648 103 aa5.9□□□□□ -1.46
USP3-201ENST00000268049 Q6Q795 121 aa5.9□□□□□ -1.46
USP3-201ENST00000268049 NOTCH3Q9UM47 2321 aa5.9□□□□□ -1.47
USP3-201ENST00000268049 SHANK1Q9Y566 2161 aa5.9□□□□□ -1.47
USP3-201ENST00000268049 C11orf86A6NJI1 115 aa5.9□□□□□ -1.47
USP3-201ENST00000268049 IGLV2-33A0A075B6J2 118 aaPredicted RBP5.89□□□□□ -1.47
USP3-201ENST00000268049 ABCA2Q9BZC7 2435 aa5.89□□□□□ -1.47
USP3-201ENST00000268049 TRBV7-3A0A075B6L6 115 aa5.89□□□□□ -1.47
USP3-201ENST00000268049 TMEM256-PLSCR3K7ERE1 68 aa5.89□□□□□ -1.47
USP3-201ENST00000268049 IGLV1-47P01700 117 aa5.89□□□□□ -1.47
USP3-201ENST00000268049 PDE6GP18545 87 aa5.89□□□□□ -1.47
USP3-201ENST00000268049 KPRPQ5T749 579 aaPredicted RBP5.89□□□□□ -1.47
USP3-201ENST00000268049 DAND5Q8N907 189 aa5.89□□□□□ -1.47
USP3-201ENST00000268049 MKI67P46013 3256 aaKnown RBP5.89□□□□□ -1.47
USP3-201ENST00000268049 TOMM6Q96B49 74 aa5.89□□□□□ -1.47
USP3-201ENST00000268049 ODF3Q96PU9 254 aa5.89□□□□□ -1.47
USP3-201ENST00000268049 IGLV10-54A0A075B6I4 117 aa5.89□□□□□ -1.47
USP3-201ENST00000268049 USP17L23D6RBM5 183 aa5.89□□□□□ -1.47
USP3-201ENST00000268049 MSRB1Q9NZV6 116 aa5.89□□□□□ -1.47
USP3-201ENST00000268049 IGHV1-58A0A0C4DH39 117 aa5.89□□□□□ -1.47
USP3-201ENST00000268049 WT1-ASQ06250 92 aa5.89□□□□□ -1.47
USP3-201ENST00000268049 RPL39LQ96EH5 51 aaKnown RBP5.89□□□□□ -1.47
USP3-201ENST00000268049 MRPS12O15235 138 aaKnown RBP5.88□□□□□ -1.47
USP3-201ENST00000268049 LINC00337Q8N6G1 96 aa5.88□□□□□ -1.47
USP3-201ENST00000268049 DEFB105AQ8NG35 78 aa5.88□□□□□ -1.47
USP3-201ENST00000268049 NANOS2P60321 138 aaKnown RBP5.88□□□□□ -1.47
USP3-201ENST00000268049 PMAIP1Q13794 54 aa5.88□□□□□ -1.47
USP3-201ENST00000268049 CFAP126Q5VTH2 177 aa5.88□□□□□ -1.47
USP3-201ENST00000268049 HIST2H2BDQ6DRA6 164 aa5.88□□□□□ -1.47
USP3-201ENST00000268049 REG3GQ6UW15 175 aa5.88□□□□□ -1.47
USP3-201ENST00000268049 C17orf77Q96MU5 243 aa5.88□□□□□ -1.47
USP3-201ENST00000268049 A6NED7 52 aa5.88□□□□□ -1.47
USP3-201ENST00000268049 CTSGP08311 255 aa5.88□□□□□ -1.47
USP3-201ENST00000268049 MIAQ16674 131 aa5.88□□□□□ -1.47
USP3-201ENST00000268049 ENHOQ6UWT2 76 aa5.88□□□□□ -1.47
USP3-201ENST00000268049 C9orf85Q96MD7 179 aa5.88□□□□□ -1.47
USP3-201ENST00000268049 YPEL4Q96NS1 127 aa5.88□□□□□ -1.47
USP3-201ENST00000268049 WI2-2373I1.2A0A1W2PRP0 233 aa5.87□□□□□ -1.47
USP3-201ENST00000268049 HIGD2BQ4VC39 106 aa5.87□□□□□ -1.47
USP3-201ENST00000268049 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.87□□□□□ -1.47
USP3-201ENST00000268049 IGKV2-29A2NJV5 120 aaPredicted RBP5.87□□□□□ -1.47
USP3-201ENST00000268049 SERP1Q9Y6X1 66 aa5.87□□□□□ -1.47
USP3-201ENST00000268049 NCKAP5O14513 1909 aa5.87□□□□□ -1.47
USP3-201ENST00000268049 ADAMTS20P59510 1910 aa5.87□□□□□ -1.47
USP3-201ENST00000268049 MRPS36P82909 103 aaKnown RBP5.87□□□□□ -1.47
USP3-201ENST00000268049 A0A0J9YX75 114 aa5.87□□□□□ -1.47
USP3-201ENST00000268049 KRTAP24-1Q3LI83 254 aa5.87□□□□□ -1.47
USP3-201ENST00000268049 A0A1W2PPR1 153 aa5.86□□□□□ -1.47
USP3-201ENST00000268049 AGPAT4-IT1Q9H0P7 198 aa5.86□□□□□ -1.47
USP3-201ENST00000268049 IGHV4-4A0A075B6R2 117 aa5.86□□□□□ -1.47
USP3-201ENST00000268049 LOC107984640A0A0U1RRK4 108 aa5.86□□□□□ -1.47
USP3-201ENST00000268049 ARFGEF3Q5TH69 2177 aa5.86□□□□□ -1.47
USP3-201ENST00000268049 KIAA1549Q9HCM3 1950 aa5.86□□□□□ -1.47
USP3-201ENST00000268049 TEX22C9J3V5 150 aa5.86□□□□□ -1.47
USP3-201ENST00000268049 LINC00526Q96FQ7 95 aa5.86□□□□□ -1.47
USP3-201ENST00000268049 SNURFQ9Y675 71 aa5.86□□□□□ -1.47
USP3-201ENST00000268049 H7C423 109 aa5.85□□□□□ -1.47
USP3-201ENST00000268049 CEMP1Q6PRD7 247 aaPredicted RBP5.85□□□□□ -1.47
USP3-201ENST00000268049 LAMA3Q16787 3333 aa5.85□□□□□ -1.47
USP3-201ENST00000268049 GNRH2O43555 120 aa5.85□□□□□ -1.47
USP3-201ENST00000268049 MED14OSP0DP75 135 aa5.85□□□□□ -1.47
USP3-201ENST00000268049 UBE2D2P62837 147 aa5.85□□□□□ -1.47
USP3-201ENST00000268049 JMJD1CQ15652 2540 aa5.85□□□□□ -1.47
USP3-201ENST00000268049 A0A1B0GXF2 115 aa5.85□□□□□ -1.47
USP3-201ENST00000268049 C16orf90A8MZG2 172 aa5.85□□□□□ -1.47
USP3-201ENST00000268049 RPL39P62891 51 aaKnown RBP5.85□□□□□ -1.47
USP3-201ENST00000268049 PPDPFQ9H3Y8 114 aa5.85□□□□□ -1.47
USP3-201ENST00000268049 PRO0628Q9UI54 55 aa5.85□□□□□ -1.47
USP3-201ENST00000268049 TP53TG3Q9ULZ0 132 aa5.85□□□□□ -1.47
USP3-201ENST00000268049 IGKV1-17P01599 117 aa5.84□□□□□ -1.47
USP3-201ENST00000268049 C5orf38Q86SI9 138 aa5.84□□□□□ -1.47
USP3-201ENST00000268049 I3L2K1 104 aa5.84□□□□□ -1.47
USP3-201ENST00000268049 BPY2O14599 106 aa5.84□□□□□ -1.47
USP3-201ENST00000268049 C2orf91Q6ZV80 131 aa5.84□□□□□ -1.47
USP3-201ENST00000268049 TRBV30A0A0K0K1B3 111 aa5.84□□□□□ -1.47
USP3-201ENST00000268049 RPL28P46779 137 aaKnown RBP5.84□□□□□ -1.47
USP3-201ENST00000268049 REG3AQ06141 175 aa5.84□□□□□ -1.47
USP3-201ENST00000268049 UFSP1Q6NVU6 142 aa5.84□□□□□ -1.47
USP3-201ENST00000268049 FAM19A1Q7Z5A9 133 aa5.84□□□□□ -1.47
USP3-201ENST00000268049 TRIAP1O43715 76 aa5.83□□□□□ -1.48
USP3-201ENST00000268049 EBI3Q14213 229 aa5.83□□□□□ -1.48
USP3-201ENST00000268049 K7EIM0 57 aa5.83□□□□□ -1.48
USP3-201ENST00000268049 LELP1Q5T871 98 aa5.83□□□□□ -1.48
USP3-201ENST00000268049 POM121L12Q8N7R1 296 aa5.83□□□□□ -1.48
USP3-201ENST00000268049 TRANK1O15050 2925 aa5.83□□□□□ -1.48
USP3-201ENST00000268049 EDN2P20800 178 aa5.83□□□□□ -1.48
USP3-201ENST00000268049 RITA1Q96K30 269 aa5.83□□□□□ -1.48
USP3-201ENST00000268049 FLNBO75369 2602 aaKnown RBP5.83□□□□□ -1.48
USP3-201ENST00000268049 K7EQG2 157 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms