RNA–Protein interactions for RNA: ENST00000265896.9

SQLE-201, Transcript of squalene epoxidase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SQLE, Length 2,961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-201ENST00000265896 IGHV1-58A0A0C4DH39 117 aa12.17□□□□□ -0.46
SQLE-201ENST00000265896 TTC32Q5I0X7 151 aa12.17□□□□□ -0.46
SQLE-201ENST00000265896 C2orf82Q6UX34 121 aa12.16□□□□□ -0.46
SQLE-201ENST00000265896 VSIG2Q96IQ7 327 aa12.16□□□□□ -0.46
SQLE-201ENST00000265896 RPL13AP40429 203 aaKnown RBP12.16□□□□□ -0.46
SQLE-201ENST00000265896 ANAPC13Q9BS18 74 aa12.15□□□□□ -0.46
SQLE-201ENST00000265896 ICOSQ9Y6W8 199 aa12.15□□□□□ -0.46
SQLE-201ENST00000265896 MRPS36P82909 103 aaKnown RBP12.15□□□□□ -0.46
SQLE-201ENST00000265896 ATXN8Q156A1 80 aa12.15□□□□□ -0.46
SQLE-201ENST00000265896 WFDC10AQ9H1F0 79 aa12.15□□□□□ -0.47
SQLE-201ENST00000265896 MAP6D1Q9H9H5 199 aa12.14□□□□□ -0.47
SQLE-201ENST00000265896 A0A0B4J2C4 111 aa12.14□□□□□ -0.47
SQLE-201ENST00000265896 Q9H8V8 135 aa12.14□□□□□ -0.47
SQLE-201ENST00000265896 VWFP04275 2813 aa12.13□□□□□ -0.47
SQLE-201ENST00000265896 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.13□□□□□ -0.47
SQLE-201ENST00000265896 SBSPONQ8IVN8 264 aa12.13□□□□□ -0.47
SQLE-201ENST00000265896 TEX29Q8N6K0 151 aa12.13□□□□□ -0.47
SQLE-201ENST00000265896 C3orf56Q8N813 242 aa12.13□□□□□ -0.47
SQLE-201ENST00000265896 H7C423 109 aa12.12□□□□□ -0.47
SQLE-201ENST00000265896 TMEM101Q96IK0 257 aa12.12□□□□□ -0.47
SQLE-201ENST00000265896 ODF3Q96PU9 254 aa12.12□□□□□ -0.47
SQLE-201ENST00000265896 SS18L2Q9UHA2 77 aa12.12□□□□□ -0.47
SQLE-201ENST00000265896 GAGE12JA6NER3 117 aa12.12□□□□□ -0.47
SQLE-201ENST00000265896 GAGE4Q13068 117 aa12.12□□□□□ -0.47
SQLE-201ENST00000265896 GAGE5Q13069 117 aa12.12□□□□□ -0.47
SQLE-201ENST00000265896 ZNF415Q09FC8 603 aa12.11□□□□□ -0.47
SQLE-201ENST00000265896 ZFAND6Q6FIF0 208 aa12.11□□□□□ -0.47
SQLE-201ENST00000265896 Q6ZTI0 123 aa12.11□□□□□ -0.47
SQLE-201ENST00000265896 Q8N2B8 174 aa12.11□□□□□ -0.47
SQLE-201ENST00000265896 SNCGO76070 127 aa12.1□□□□□ -0.47
SQLE-201ENST00000265896 B5MCH6 92 aa12.1□□□□□ -0.47
SQLE-201ENST00000265896 MIAQ16674 131 aa12.1□□□□□ -0.47
SQLE-201ENST00000265896 LOC100131303A0A0U1RQF7 123 aa12.09□□□□□ -0.47
SQLE-201ENST00000265896 TMEM89A2RUT3 159 aa12.09□□□□□ -0.47
SQLE-201ENST00000265896 C11orf72Q8NBR9 251 aa12.09□□□□□ -0.47
SQLE-201ENST00000265896 TRAV8-4A0A0B4J246 113 aa12.09□□□□□ -0.47
SQLE-201ENST00000265896 PIK3CD-AS1Q5SR53 167 aa12.09□□□□□ -0.47
SQLE-201ENST00000265896 HIST2H2BCQ6DN03 193 aa12.09□□□□□ -0.47
SQLE-201ENST00000265896 C15orf53Q8NAA6 179 aa12.09□□□□□ -0.47
SQLE-201ENST00000265896 MEIG1Q5JSS6 88 aa12.09□□□□□ -0.47
SQLE-201ENST00000265896 UBE2WQ96B02 151 aa12.09□□□□□ -0.47
SQLE-201ENST00000265896 Q6YL49 198 aa12.08□□□□□ -0.48
SQLE-201ENST00000265896 GAGE2BQ13066 116 aa12.08□□□□□ -0.48
SQLE-201ENST00000265896 GAGE2EQ4V326 116 aa12.08□□□□□ -0.48
SQLE-201ENST00000265896 TOMM7Q9P0U1 55 aa12.08□□□□□ -0.48
SQLE-201ENST00000265896 GAGE2DQ9UEU5 116 aa12.08□□□□□ -0.48
SQLE-201ENST00000265896 PYGO1Q9Y3Y4 419 aa12.08□□□□□ -0.48
SQLE-201ENST00000265896 UBR5O95071 2799 aaPredicted RBP12.07□□□□□ -0.48
SQLE-201ENST00000265896 TRBV10-2A0A0K0K1G8 114 aa12.07□□□□□ -0.48
SQLE-201ENST00000265896 TINCRA0A1B0GVN0 87 aa12.07□□□□□ -0.48
SQLE-201ENST00000265896 SOSTDC1Q6X4U4 206 aa12.06□□□□□ -0.48
SQLE-201ENST00000265896 NOP10Q9NPE3 64 aaKnown RBP12.06□□□□□ -0.48
SQLE-201ENST00000265896 IGHV4-31P0DP07 118 aa12.06□□□□□ -0.48
SQLE-201ENST00000265896 RPL35AP18077 110 aaKnown RBP12.06□□□□□ -0.48
SQLE-201ENST00000265896 CITED2Q99967 270 aaPredicted RBP12.06□□□□□ -0.48
SQLE-201ENST00000265896 C11orf68Q9H3H3 251 aaKnown RBP12.06□□□□□ -0.48
SQLE-201ENST00000265896 A0A096LNT2 108 aa12.06□□□□□ -0.48
SQLE-201ENST00000265896 TRBV30A0A0K0K1B3 111 aa12.06□□□□□ -0.48
SQLE-201ENST00000265896 ODF3L2Q3SX64 289 aa12.06□□□□□ -0.48
SQLE-201ENST00000265896 LINC00242Q5T6M2 205 aa12.06□□□□□ -0.48
SQLE-201ENST00000265896 PRIMA1Q86XR5 153 aa12.06□□□□□ -0.48
SQLE-201ENST00000265896 COX6CP09669 75 aa12.05□□□□□ -0.48
SQLE-201ENST00000265896 DEFB114Q30KQ6 69 aa12.05□□□□□ -0.48
SQLE-201ENST00000265896 STHQ8IWL8 128 aa12.05□□□□□ -0.48
SQLE-201ENST00000265896 TENM4Q6N022 2769 aa12.05□□□□□ -0.48
SQLE-201ENST00000265896 INSP01308 110 aa12.05□□□□□ -0.48
SQLE-201ENST00000265896 NTM-AS1Q6ZSK4 140 aa12.05□□□□□ -0.48
SQLE-201ENST00000265896 Q96MF0 132 aa12.04□□□□□ -0.48
SQLE-201ENST00000265896 CCDC179H3BU77 68 aa12.04□□□□□ -0.48
SQLE-201ENST00000265896 NHLRC4P0CG21 123 aaPredicted RBP12.04□□□□□ -0.48
SQLE-201ENST00000265896 C1orf158Q8N1D5 194 aa12.04□□□□□ -0.48
SQLE-201ENST00000265896 CR1P17927 2039 aa12.04□□□□□ -0.48
SQLE-201ENST00000265896 TMEM262E9PQX1 116 aa12.03□□□□□ -0.48
SQLE-201ENST00000265896 SPANXA1Q9NS26 97 aa12.03□□□□□ -0.48
SQLE-201ENST00000265896 GAGE7O76087 117 aa12.03□□□□□ -0.48
SQLE-201ENST00000265896 GAGE12FP0CL80 117 aa12.03□□□□□ -0.48
SQLE-201ENST00000265896 GAGE12GP0CL81 117 aa12.03□□□□□ -0.48
SQLE-201ENST00000265896 GAGE12IP0CL82 117 aa12.03□□□□□ -0.48
SQLE-201ENST00000265896 LINC00308Q8TCZ7 52 aa12.03□□□□□ -0.48
SQLE-201ENST00000265896 Q9HAA7 133 aa12.03□□□□□ -0.48
SQLE-201ENST00000265896 BBC3Q96PG8 261 aaPredicted RBP12.02□□□□□ -0.49
SQLE-201ENST00000265896 CITED1Q99966 193 aa12.02□□□□□ -0.49
SQLE-201ENST00000265896 RS1O15537 224 aa12.01□□□□□ -0.49
SQLE-201ENST00000265896 PEMTQ9UBM1 199 aa12.01□□□□□ -0.49
SQLE-201ENST00000265896 SPANXDQ9BXN6 97 aa12.01□□□□□ -0.49
SQLE-201ENST00000265896 SPANXCQ9NY87 97 aa12.01□□□□□ -0.49
SQLE-201ENST00000265896 NDUFV3P56181 108 aaKnown RBP12□□□□□ -0.49
SQLE-201ENST00000265896 GAGE6Q13070 117 aa12□□□□□ -0.49
SQLE-201ENST00000265896 TRGV2A0A075B6R0 118 aa11.99□□□□□ -0.49
SQLE-201ENST00000265896 SMIM1B2RUZ4 78 aa11.99□□□□□ -0.49
SQLE-201ENST00000265896 FASNP49327 2511 aaKnown RBP11.99□□□□□ -0.49
SQLE-201ENST00000265896 LST1O00453 97 aa11.99□□□□□ -0.49
SQLE-201ENST00000265896 CIRBPQ14011 172 aaKnown RBP11.98□□□□□ -0.49
SQLE-201ENST00000265896 HECTD1Q9ULT8 2610 aa11.98□□□□□ -0.49
SQLE-201ENST00000265896 CHCHD5Q9BSY4 110 aa11.98□□□□□ -0.49
SQLE-201ENST00000265896 FAM218AQ96MZ4 157 aa11.97□□□□□ -0.49
SQLE-201ENST00000265896 A0A096LPF7 62 aa11.97□□□□□ -0.49
SQLE-201ENST00000265896 NDUFA1O15239 70 aa11.97□□□□□ -0.49
SQLE-201ENST00000265896 RPL36AP83881 106 aaKnown RBP11.97□□□□□ -0.49
SQLE-201ENST00000265896 CLPSL2Q6UWE3 100 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms