RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 LINC01546A6NGU7 62 aa12.63□□□□□ -0.39
SDF4-201ENST00000263741 C2orf91Q6ZV80 131 aa12.63□□□□□ -0.39
SDF4-201ENST00000263741 RNF185Q96GF1 192 aa12.63□□□□□ -0.39
SDF4-201ENST00000263741 IGLV2-18A0A075B6J9 118 aa12.63□□□□□ -0.39
SDF4-201ENST00000263741 LINC00694P0DN24 101 aa12.63□□□□□ -0.39
SDF4-201ENST00000263741 TMEM97Q5BJF2 176 aa12.63□□□□□ -0.39
SDF4-201ENST00000263741 A6NDN8 102 aa12.62□□□□□ -0.39
SDF4-201ENST00000263741 K7EP13 123 aa12.62□□□□□ -0.39
SDF4-201ENST00000263741 SIVA1O15304 175 aa12.62□□□□□ -0.39
SDF4-201ENST00000263741 LYPD5Q6UWN5 251 aa12.62□□□□□ -0.39
SDF4-201ENST00000263741 ZNRF2Q8NHG8 242 aa12.62□□□□□ -0.39
SDF4-201ENST00000263741 FCER1GP30273 86 aa12.61□□□□□ -0.39
SDF4-201ENST00000263741 NEXN-AS1Q8NBZ9 246 aa12.61□□□□□ -0.39
SDF4-201ENST00000263741 TNFRSF6BO95407 300 aa12.61□□□□□ -0.39
SDF4-201ENST00000263741 FGF6P10767 208 aa12.61□□□□□ -0.39
SDF4-201ENST00000263741 HSD52Q0P140 79 aa12.61□□□□□ -0.39
SDF4-201ENST00000263741 BOD1L2Q8IYS8 172 aa12.61□□□□□ -0.39
SDF4-201ENST00000263741 M0QY20 66 aa12.6□□□□□ -0.39
SDF4-201ENST00000263741 ATP6V0E2Q8NHE4 81 aa12.6□□□□□ -0.39
SDF4-201ENST00000263741 DNAH6Q9C0G6 4158 aa12.59□□□□□ -0.39
SDF4-201ENST00000263741 IGHV3-38A0A0C4DH36 116 aa12.58□□□□□ -0.39
SDF4-201ENST00000263741 TRBV10-1A0A0K0K1A3 114 aa12.58□□□□□ -0.39
SDF4-201ENST00000263741 M0R2N4 97 aa12.58□□□□□ -0.39
SDF4-201ENST00000263741 ATP5LO75964 103 aa12.58□□□□□ -0.39
SDF4-201ENST00000263741 GAS8-AS1O95177 125 aa12.58□□□□□ -0.39
SDF4-201ENST00000263741 RPL36AP83881 106 aaKnown RBP12.58□□□□□ -0.39
SDF4-201ENST00000263741 Q8N8P6 123 aa12.58□□□□□ -0.39
SDF4-201ENST00000263741 RPL36ALQ969Q0 106 aaKnown RBP12.58□□□□□ -0.39
SDF4-201ENST00000263741 TRBV7-3A0A075B6L6 115 aa12.58□□□□□ -0.4
SDF4-201ENST00000263741 WFDC10BQ8IUB3 73 aa12.57□□□□□ -0.4
SDF4-201ENST00000263741 RPL39LQ96EH5 51 aaKnown RBP12.57□□□□□ -0.4
SDF4-201ENST00000263741 NMUP48645 174 aa12.57□□□□□ -0.4
SDF4-201ENST00000263741 UBE2D3P61077 147 aa12.57□□□□□ -0.4
SDF4-201ENST00000263741 UBE2D2P62837 147 aa12.57□□□□□ -0.4
SDF4-201ENST00000263741 SH2D6Q7Z4S9 175 aa12.56□□□□□ -0.4
SDF4-201ENST00000263741 DEFB104AQ8WTQ1 72 aa12.56□□□□□ -0.4
SDF4-201ENST00000263741 PRSS1P07477 247 aa12.55□□□□□ -0.4
SDF4-201ENST00000263741 UPK3BQ9BT76 320 aa12.55□□□□□ -0.4
SDF4-201ENST00000263741 GTSF1LQ9H1H1 148 aa12.55□□□□□ -0.4
SDF4-201ENST00000263741 H3BRM9 83 aa12.55□□□□□ -0.4
SDF4-201ENST00000263741 H7C1H1 209 aa12.55□□□□□ -0.4
SDF4-201ENST00000263741 AMMECR1LQ6DCA0 310 aa12.55□□□□□ -0.4
SDF4-201ENST00000263741 ERASQ7Z444 233 aa12.54□□□□□ -0.4
SDF4-201ENST00000263741 MRAP2Q96G30 205 aa12.54□□□□□ -0.4
SDF4-201ENST00000263741 Q9H8V8 135 aa12.54□□□□□ -0.4
SDF4-201ENST00000263741 IGKCP01834 107 aa12.53□□□□□ -0.4
SDF4-201ENST00000263741 GTF2H5Q6ZYL4 71 aa12.53□□□□□ -0.4
SDF4-201ENST00000263741 TNFRSF18Q9Y5U5 241 aa12.53□□□□□ -0.4
SDF4-201ENST00000263741 DPM2O94777 84 aa12.53□□□□□ -0.4
SDF4-201ENST00000263741 LAGE3Q14657 143 aa12.53□□□□□ -0.4
SDF4-201ENST00000263741 KRTAP1-5Q9BYS1 174 aa12.52□□□□□ -0.4
SDF4-201ENST00000263741 Q8N3U1 123 aa12.52□□□□□ -0.41
SDF4-201ENST00000263741 C9orf118A6NHY6 69 aa12.51□□□□□ -0.41
SDF4-201ENST00000263741 TIRAPP58753 221 aa12.51□□□□□ -0.41
SDF4-201ENST00000263741 LELP1Q5T871 98 aa12.51□□□□□ -0.41
SDF4-201ENST00000263741 HIGD1BQ9P298 99 aa12.51□□□□□ -0.41
SDF4-201ENST00000263741 TRAV8-6A0A0B4J262 113 aa12.5□□□□□ -0.41
SDF4-201ENST00000263741 NRACQ8N912 160 aa12.5□□□□□ -0.41
SDF4-201ENST00000263741 GAGE10A6NGK3 116 aa12.5□□□□□ -0.41
SDF4-201ENST00000263741 DNAJC30Q96LL9 226 aa12.5□□□□□ -0.41
SDF4-201ENST00000263741 PCP2Q8IVA1 136 aa12.49□□□□□ -0.41
SDF4-201ENST00000263741 NBDYA0A0U1RRE5 68 aa12.49□□□□□ -0.41
SDF4-201ENST00000263741 RBX1P62877 108 aa12.49□□□□□ -0.41
SDF4-201ENST00000263741 DNAH2Q9P225 4427 aa12.48□□□□□ -0.41
SDF4-201ENST00000263741 PLNP26678 52 aa12.48□□□□□ -0.41
SDF4-201ENST00000263741 Q6ZR54 194 aa12.48□□□□□ -0.41
SDF4-201ENST00000263741 NTM-AS1Q6ZSK4 140 aa12.48□□□□□ -0.41
SDF4-201ENST00000263741 CST9LQ9H4G1 147 aa12.48□□□□□ -0.41
SDF4-201ENST00000263741 ORMDL2Q53FV1 153 aa12.47□□□□□ -0.41
SDF4-201ENST00000263741 DAZ4Q86SG3 579 aaKnown RBP12.47□□□□□ -0.41
SDF4-201ENST00000263741 SMIM2Q9BVW6 85 aa12.47□□□□□ -0.41
SDF4-201ENST00000263741 DAZ3Q9NR90 486 aaKnown RBP12.47□□□□□ -0.41
SDF4-201ENST00000263741 K7EMI3 77 aa12.47□□□□□ -0.41
SDF4-201ENST00000263741 IGHV3-30P01768 117 aa12.46□□□□□ -0.41
SDF4-201ENST00000263741 IGHV3-33P01772 117 aa12.46□□□□□ -0.41
SDF4-201ENST00000263741 IGHV3-30-3P0DP02 117 aa12.46□□□□□ -0.41
SDF4-201ENST00000263741 IGHV3-30-5P0DP03 117 aa12.46□□□□□ -0.41
SDF4-201ENST00000263741 TRBV6-8A0A0A6YYG3 113 aa12.46□□□□□ -0.42
SDF4-201ENST00000263741 SDHAF1A6NFY7 115 aa12.46□□□□□ -0.42
SDF4-201ENST00000263741 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.46□□□□□ -0.42
SDF4-201ENST00000263741 PPP1R17O96001 155 aa12.46□□□□□ -0.42
SDF4-201ENST00000263741 ZC2HC1BQ5TFG8 222 aa12.46□□□□□ -0.42
SDF4-201ENST00000263741 C20orf78Q9BR46 151 aa12.46□□□□□ -0.42
SDF4-201ENST00000263741 CHAC1Q9BUX1 264 aa12.46□□□□□ -0.42
SDF4-201ENST00000263741 A0A087WX48 190 aa12.45□□□□□ -0.42
SDF4-201ENST00000263741 H3BUT2 72 aa12.45□□□□□ -0.42
SDF4-201ENST00000263741 K7ERU9 68 aa12.45□□□□□ -0.42
SDF4-201ENST00000263741 OCIAD2Q56VL3 154 aa12.45□□□□□ -0.42
SDF4-201ENST00000263741 K7EP34 96 aa12.44□□□□□ -0.42
SDF4-201ENST00000263741 DNAH10OSP0CZ25 163 aa12.44□□□□□ -0.42
SDF4-201ENST00000263741 TRAV12-1A0A0B4J245 112 aa12.44□□□□□ -0.42
SDF4-201ENST00000263741 SMIM13P0DJ93 91 aa12.44□□□□□ -0.42
SDF4-201ENST00000263741 RNF151Q2KHN1 245 aa12.44□□□□□ -0.42
SDF4-201ENST00000263741 OR5A1Q8NGJ0 315 aa12.44□□□□□ -0.42
SDF4-201ENST00000263741 TRBV6-5A0A0K0K1A5 114 aa12.43□□□□□ -0.42
SDF4-201ENST00000263741 GCSHP23434 173 aa12.43□□□□□ -0.42
SDF4-201ENST00000263741 SUMO2P61956 95 aaKnown RBP12.43□□□□□ -0.42
SDF4-201ENST00000263741 MRPL35Q9NZE8 188 aaKnown RBP12.43□□□□□ -0.42
SDF4-201ENST00000263741 FRAS1Q86XX4 4008 aa12.43□□□□□ -0.42
SDF4-201ENST00000263741 IGKV2D-26A0A0A0MRZ7 120 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms