RNA–Protein interactions for RNA: ENST00000261007.9

CHRNA1-201, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2 BASIC

Gene CHRNA1, Length 1,980 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-201ENST00000261007 DEFB131AP59861 70 aa7.84□□□□□ -1.15
CHRNA1-201ENST00000261007 DEFB136Q30KP8 78 aa7.84□□□□□ -1.15
CHRNA1-201ENST00000261007 SDIM1Q6ZPB5 146 aa7.84□□□□□ -1.15
CHRNA1-201ENST00000261007 TRAV12-2A0A075B6T6 113 aa7.84□□□□□ -1.15
CHRNA1-201ENST00000261007 CXCL5P42830 114 aa7.84□□□□□ -1.15
CHRNA1-201ENST00000261007 CIRBPQ14011 172 aaKnown RBP7.84□□□□□ -1.15
CHRNA1-201ENST00000261007 C3orf22Q8N5N4 141 aa7.84□□□□□ -1.15
CHRNA1-201ENST00000261007 COPS9Q8WXC6 57 aa7.84□□□□□ -1.15
CHRNA1-201ENST00000261007 LINC00467Q9BRT7 94 aa7.84□□□□□ -1.15
CHRNA1-201ENST00000261007 FAM236AA0A1B0GUQ0 79 aa7.83□□□□□ -1.16
CHRNA1-201ENST00000261007 FAM236BA0A1B0GV22 79 aa7.83□□□□□ -1.16
CHRNA1-201ENST00000261007 COX7A2LO14548 114 aa7.83□□□□□ -1.16
CHRNA1-201ENST00000261007 UQCRQO14949 82 aa7.83□□□□□ -1.16
CHRNA1-201ENST00000261007 NDUFA1O15239 70 aa7.83□□□□□ -1.16
CHRNA1-201ENST00000261007 DEFB114Q30KQ6 69 aa7.83□□□□□ -1.16
CHRNA1-201ENST00000261007 C18orf65Q6ZTR6 163 aa7.83□□□□□ -1.16
CHRNA1-201ENST00000261007 C16orf95Q9H693 158 aa7.83□□□□□ -1.16
CHRNA1-201ENST00000261007 ASH1LQ9NR48 2969 aaKnown RBP7.83□□□□□ -1.16
CHRNA1-201ENST00000261007 RNASE1P07998 156 aaKnown RBP7.82□□□□□ -1.16
CHRNA1-201ENST00000261007 CMC4P56277 68 aaPredicted RBP7.82□□□□□ -1.16
CHRNA1-201ENST00000261007 TIRAPP58753 221 aa7.82□□□□□ -1.16
CHRNA1-201ENST00000261007 DNAJC30Q96LL9 226 aa7.82□□□□□ -1.16
CHRNA1-201ENST00000261007 CITED2Q99967 270 aaPredicted RBP7.82□□□□□ -1.16
CHRNA1-201ENST00000261007 TRACP01848 142 aa7.82□□□□□ -1.16
CHRNA1-201ENST00000261007 MAP6D1Q9H9H5 199 aa7.82□□□□□ -1.16
CHRNA1-201ENST00000261007 UBE2D4Q9Y2X8 147 aa7.82□□□□□ -1.16
CHRNA1-201ENST00000261007 NAV2Q8IVL1 2488 aa7.81□□□□□ -1.16
CHRNA1-201ENST00000261007 IGLV5-45A0A087WSX0 123 aa7.81□□□□□ -1.16
CHRNA1-201ENST00000261007 KNCNA6PVL3 124 aa7.81□□□□□ -1.16
CHRNA1-201ENST00000261007 ZNF415Q09FC8 603 aa7.81□□□□□ -1.16
CHRNA1-201ENST00000261007 LINC00526Q96FQ7 95 aa7.81□□□□□ -1.16
CHRNA1-201ENST00000261007 KRTAP3-3Q9BYR6 98 aa7.81□□□□□ -1.16
CHRNA1-201ENST00000261007 KRTAP3-2Q9BYR7 98 aa7.81□□□□□ -1.16
CHRNA1-201ENST00000261007 PPDPFQ9H3Y8 114 aa7.81□□□□□ -1.16
CHRNA1-201ENST00000261007 PTPN13Q12923 2485 aa7.81□□□□□ -1.16
CHRNA1-201ENST00000261007 LRRK2Q5S007 2527 aa7.81□□□□□ -1.16
CHRNA1-201ENST00000261007 CREBBPQ92793 2442 aa7.81□□□□□ -1.16
CHRNA1-201ENST00000261007 USP9YO00507 2555 aaPredicted RBP7.81□□□□□ -1.16
CHRNA1-201ENST00000261007 NDUFA7O95182 113 aa7.8□□□□□ -1.16
CHRNA1-201ENST00000261007 C9orf153Q5TBE3 101 aa7.8□□□□□ -1.16
CHRNA1-201ENST00000261007 C5orf38Q86SI9 138 aa7.8□□□□□ -1.16
CHRNA1-201ENST00000261007 DAND5Q8N907 189 aa7.8□□□□□ -1.16
CHRNA1-201ENST00000261007 CHCHD7Q9BUK0 85 aa7.8□□□□□ -1.16
CHRNA1-201ENST00000261007 CCL24O00175 119 aa7.8□□□□□ -1.16
CHRNA1-201ENST00000261007 NPC2P61916 151 aa7.8□□□□□ -1.16
CHRNA1-201ENST00000261007 KRTAP1-1Q07627 177 aa7.8□□□□□ -1.16
CHRNA1-201ENST00000261007 FAM222AQ5U5X8 452 aa7.8□□□□□ -1.16
CHRNA1-201ENST00000261007 LINC00308Q8TCZ7 52 aa7.8□□□□□ -1.16
CHRNA1-201ENST00000261007 ZFYVE26Q68DK2 2539 aa7.79□□□□□ -1.16
CHRNA1-201ENST00000261007 CSMD1Q96PZ7 3565 aa7.79□□□□□ -1.16
CHRNA1-201ENST00000261007 INSP01308 110 aa7.79□□□□□ -1.16
CHRNA1-201ENST00000261007 FBN2P35556 2912 aa7.79□□□□□ -1.16
CHRNA1-201ENST00000261007 ESM1Q9NQ30 184 aa7.79□□□□□ -1.16
CHRNA1-201ENST00000261007 A8MZ25 164 aa7.79□□□□□ -1.16
CHRNA1-201ENST00000261007 CEMP1Q6PRD7 247 aaPredicted RBP7.79□□□□□ -1.16
CHRNA1-201ENST00000261007 SMCR5Q8TEV8 140 aa7.79□□□□□ -1.16
CHRNA1-201ENST00000261007 A0A1B0GX51 115 aa7.78□□□□□ -1.16
CHRNA1-201ENST00000261007 INAFM2P0DMQ5 153 aa7.78□□□□□ -1.16
CHRNA1-201ENST00000261007 BEAN1Q3B7T3 259 aa7.78□□□□□ -1.16
CHRNA1-201ENST00000261007 IGLV5-39A0A0G2JS06 123 aa7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 RBMY1BA6NDE4 496 aaKnown RBP7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 RBMY1EA6NEQ0 496 aaKnown RBP7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 RBMY1DP0C7P1 496 aaKnown RBP7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 DAZ2Q13117 558 aaKnown RBP7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 DAZ4Q86SG3 579 aaKnown RBP7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 DAZ3Q9NR90 486 aaKnown RBP7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 DOPEY2Q9Y3R5 2298 aa7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 BAALC-AS2P0C853 105 aa7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 RBMY1A1P0DJD3 496 aaKnown RBP7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 RBMY1CP0DJD4 496 aa7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 LINC00694P0DN24 101 aa7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 COX7CP15954 63 aa7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 RBMY1FQ15415 496 aaKnown RBP7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 RNASE13Q5GAN3 156 aaKnown RBP7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 FAM19A3Q7Z5A8 133 aa7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 LINC01006Q8NI28 216 aa7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 CDKN2A-AS1Q9UH64 79 aa7.77□□□□□ -1.17
CHRNA1-201ENST00000261007 HILS1P60008 231 aa7.76□□□□□ -1.17
CHRNA1-201ENST00000261007 HERVK_113P63121 156 aa7.76□□□□□ -1.17
CHRNA1-201ENST00000261007 HIST2H2BCQ6DN03 193 aa7.76□□□□□ -1.17
CHRNA1-201ENST00000261007 STHQ8IWL8 128 aa7.76□□□□□ -1.17
CHRNA1-201ENST00000261007 UTP20O75691 2785 aaKnown RBP7.75□□□□□ -1.17
CHRNA1-201ENST00000261007 CRYGAP11844 174 aa7.75□□□□□ -1.17
CHRNA1-201ENST00000261007 HIST1H4AP62805 103 aaKnown RBP7.75□□□□□ -1.17
CHRNA1-201ENST00000261007 RPS28P62857 69 aaKnown RBP7.75□□□□□ -1.17
CHRNA1-201ENST00000261007 C3orf56Q8N813 242 aa7.75□□□□□ -1.17
CHRNA1-201ENST00000261007 J3KT08 172 aa7.75□□□□□ -1.17
CHRNA1-201ENST00000261007 ATOX1O00244 68 aa7.75□□□□□ -1.17
CHRNA1-201ENST00000261007 PF4P02776 101 aa7.75□□□□□ -1.17
CHRNA1-201ENST00000261007 POLQO75417 2590 aa7.75□□□□□ -1.17
CHRNA1-201ENST00000261007 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.74□□□□□ -1.17
CHRNA1-201ENST00000261007 IGKV2-29A2NJV5 120 aaPredicted RBP7.74□□□□□ -1.17
CHRNA1-201ENST00000261007 PROK1P58294 105 aa7.74□□□□□ -1.17
CHRNA1-201ENST00000261007 ODF3L2Q3SX64 289 aa7.74□□□□□ -1.17
CHRNA1-201ENST00000261007 C2orf48Q96LS8 159 aa7.74□□□□□ -1.17
CHRNA1-201ENST00000261007 Q9H8V8 135 aa7.74□□□□□ -1.17
CHRNA1-201ENST00000261007 C22orf24Q9Y442 160 aa7.74□□□□□ -1.17
CHRNA1-201ENST00000261007 IGHV3-73A0A0B4J1V6 119 aa7.73□□□□□ -1.17
CHRNA1-201ENST00000261007 A0A1W2PRX2 142 aa7.73□□□□□ -1.17
CHRNA1-201ENST00000261007 OVOL2Q9BRP0 275 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms