RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 UPK3BQ9BT76 320 aa10.65□□□□□ -0.7
GYPC-201ENST00000259254 TIMM21Q9BVV7 248 aa10.65□□□□□ -0.7
GYPC-201ENST00000259254 IGIPA6NJ69 53 aa10.64□□□□□ -0.71
GYPC-201ENST00000259254 SIVA1O15304 175 aa10.64□□□□□ -0.71
GYPC-201ENST00000259254 Q6ZN92 141 aa10.64□□□□□ -0.71
GYPC-201ENST00000259254 Q6ZUT4 128 aa10.64□□□□□ -0.71
GYPC-201ENST00000259254 LINC00173Q6ZV60 143 aa10.64□□□□□ -0.71
GYPC-201ENST00000259254 Q8N3U1 123 aa10.64□□□□□ -0.71
GYPC-201ENST00000259254 TIMM17AQ99595 171 aa10.64□□□□□ -0.71
GYPC-201ENST00000259254 OPRPNQ99935 248 aaPredicted RBP10.64□□□□□ -0.71
GYPC-201ENST00000259254 PYGO1Q9Y3Y4 419 aa10.64□□□□□ -0.71
GYPC-201ENST00000259254 IGLV4-60A0A075B6I1 120 aa10.63□□□□□ -0.71
GYPC-201ENST00000259254 ANGP03950 147 aaKnown RBP10.63□□□□□ -0.71
GYPC-201ENST00000259254 RNASE13Q5GAN3 156 aaKnown RBP10.63□□□□□ -0.71
GYPC-201ENST00000259254 LINC00476Q8WZB0 136 aa10.63□□□□□ -0.71
GYPC-201ENST00000259254 IFI27L1Q96BM0 104 aa10.63□□□□□ -0.71
GYPC-201ENST00000259254 HIST1H2BLQ99880 126 aa10.63□□□□□ -0.71
GYPC-201ENST00000259254 IGLV4-3A0A075B6K6 122 aa10.62□□□□□ -0.71
GYPC-201ENST00000259254 A0A1B0GUV1 79 aa10.62□□□□□ -0.71
GYPC-201ENST00000259254 H0Y8G0 127 aa10.62□□□□□ -0.71
GYPC-201ENST00000259254 LINC01556Q5JQF7 62 aa10.62□□□□□ -0.71
GYPC-201ENST00000259254 PAPPA-AS1Q5QFB9 102 aa10.62□□□□□ -0.71
GYPC-201ENST00000259254 ZNF664Q8N3J9 261 aa10.62□□□□□ -0.71
GYPC-201ENST00000259254 VCX2Q9H322 139 aa10.62□□□□□ -0.71
GYPC-201ENST00000259254 Q9H8V8 135 aa10.62□□□□□ -0.71
GYPC-201ENST00000259254 CSDC2Q9Y534 153 aaKnown RBP10.62□□□□□ -0.71
GYPC-201ENST00000259254 IGKV3OR2-268A0A0C4DH90 116 aa10.61□□□□□ -0.71
GYPC-201ENST00000259254 PRSS1P07477 247 aa10.61□□□□□ -0.71
GYPC-201ENST00000259254 DNAH10OSP0CZ25 163 aa10.61□□□□□ -0.71
GYPC-201ENST00000259254 PACRGQ96M98 296 aaPredicted RBP10.61□□□□□ -0.71
GYPC-201ENST00000259254 MAP1LC3CQ9BXW4 147 aa10.61□□□□□ -0.71
GYPC-201ENST00000259254 CDC42SE2Q9NRR3 84 aa10.61□□□□□ -0.71
GYPC-201ENST00000259254 KLK12Q9UKR0 248 aa10.61□□□□□ -0.71
GYPC-201ENST00000259254 IFITM10A6NMD0 228 aa10.6□□□□□ -0.71
GYPC-201ENST00000259254 LY6G6CO95867 125 aa10.6□□□□□ -0.71
GYPC-201ENST00000259254 NPSP0C0P6 89 aa10.6□□□□□ -0.71
GYPC-201ENST00000259254 KRTDAPP60985 99 aa10.6□□□□□ -0.71
GYPC-201ENST00000259254 MRPS36P82909 103 aaKnown RBP10.6□□□□□ -0.71
GYPC-201ENST00000259254 LGALS9CQ6DKI2 356 aa10.6□□□□□ -0.71
GYPC-201ENST00000259254 CLPSL2Q6UWE3 100 aa10.6□□□□□ -0.71
GYPC-201ENST00000259254 TEX43Q6ZNM6 134 aa10.6□□□□□ -0.71
GYPC-201ENST00000259254 BAALCQ8WXS3 180 aa10.6□□□□□ -0.71
GYPC-201ENST00000259254 ZC2HC1BQ5TFG8 222 aa10.59□□□□□ -0.71
GYPC-201ENST00000259254 LINC00269Q8N2A0 174 aa10.59□□□□□ -0.71
GYPC-201ENST00000259254 C2orf88Q9BSF0 95 aa10.59□□□□□ -0.71
GYPC-201ENST00000259254 TRAV9-2A0A087WT02 112 aa10.58□□□□□ -0.72
GYPC-201ENST00000259254 CRPP02741 224 aa10.58□□□□□ -0.72
GYPC-201ENST00000259254 REG3AQ06141 175 aa10.57□□□□□ -0.72
GYPC-201ENST00000259254 PMVKQ15126 192 aa10.57□□□□□ -0.72
GYPC-201ENST00000259254 OR10D4PQ8NGN7 298 aa10.57□□□□□ -0.72
GYPC-201ENST00000259254 FAM104AQ969W3 186 aa10.57□□□□□ -0.72
GYPC-201ENST00000259254 UBE2WQ96B02 151 aa10.57□□□□□ -0.72
GYPC-201ENST00000259254 EPPK1P58107 5090 aaKnown RBP10.57□□□□□ -0.72
GYPC-201ENST00000259254 TRAV13-1A0A0B4J241 112 aa10.56□□□□□ -0.72
GYPC-201ENST00000259254 C3orf79P0CE67 100 aa10.56□□□□□ -0.72
GYPC-201ENST00000259254 C10orf126Q8N4M7 172 aa10.56□□□□□ -0.72
GYPC-201ENST00000259254 CST9LQ9H4G1 147 aa10.56□□□□□ -0.72
GYPC-201ENST00000259254 PRSS29PA6NIE9 313 aa10.55□□□□□ -0.72
GYPC-201ENST00000259254 SYS1-DBNDD2H3BUS1 97 aa10.55□□□□□ -0.72
GYPC-201ENST00000259254 AMELXQ99217 191 aa10.55□□□□□ -0.72
GYPC-201ENST00000259254 TTC32Q5I0X7 151 aa10.54□□□□□ -0.72
GYPC-201ENST00000259254 CHTOPQ9Y3Y2 248 aaKnown RBP10.54□□□□□ -0.72
GYPC-201ENST00000259254 TRAV12-1A0A0B4J245 112 aa10.53□□□□□ -0.72
GYPC-201ENST00000259254 C20orf202A1L168 122 aa10.53□□□□□ -0.72
GYPC-201ENST00000259254 AKR1D1P51857 326 aa10.53□□□□□ -0.72
GYPC-201ENST00000259254 SS18Q15532 418 aa10.53□□□□□ -0.72
GYPC-201ENST00000259254 PET117Q6UWS5 81 aa10.53□□□□□ -0.72
GYPC-201ENST00000259254 Q9HAA7 133 aa10.53□□□□□ -0.72
GYPC-201ENST00000259254 IGLV10-54A0A075B6I4 117 aa10.52□□□□□ -0.73
GYPC-201ENST00000259254 NBDYA0A0U1RRE5 68 aa10.52□□□□□ -0.73
GYPC-201ENST00000259254 LINC00959A0A1B0GUT2 108 aa10.52□□□□□ -0.73
GYPC-201ENST00000259254 IBA57-AS1B1ANH7 110 aa10.52□□□□□ -0.73
GYPC-201ENST00000259254 K7EP13 123 aa10.52□□□□□ -0.73
GYPC-201ENST00000259254 ENHOQ6UWT2 76 aa10.52□□□□□ -0.73
GYPC-201ENST00000259254 PMCHL2Q9BQD1 86 aa10.52□□□□□ -0.73
GYPC-201ENST00000259254 PRR34Q9NV39 138 aa10.52□□□□□ -0.73
GYPC-201ENST00000259254 BIRC6Q9NR09 4857 aa10.52□□□□□ -0.73
GYPC-201ENST00000259254 A0A0J9YXV3 536 aa10.51□□□□□ -0.73
GYPC-201ENST00000259254 UBE2D1P51668 147 aa10.51□□□□□ -0.73
GYPC-201ENST00000259254 MIAQ16674 131 aa10.51□□□□□ -0.73
GYPC-201ENST00000259254 MRPL35Q9NZE8 188 aaKnown RBP10.51□□□□□ -0.73
GYPC-201ENST00000259254 KMT2AQ03164 3969 aa10.51□□□□□ -0.73
GYPC-201ENST00000259254 TRAV8-3A0A0A6YYJ7 113 aa10.5□□□□□ -0.73
GYPC-201ENST00000259254 F8VRH5 84 aa10.5□□□□□ -0.73
GYPC-201ENST00000259254 M0R2N4 97 aa10.5□□□□□ -0.73
GYPC-201ENST00000259254 CCL25O15444 150 aa10.5□□□□□ -0.73
GYPC-201ENST00000259254 ODF1Q14990 250 aa10.5□□□□□ -0.73
GYPC-201ENST00000259254 SPATA12Q7Z6I5 190 aa10.5□□□□□ -0.73
GYPC-201ENST00000259254 KRTAP1-5Q9BYS1 174 aa10.5□□□□□ -0.73
GYPC-201ENST00000259254 GEMIN7Q9H840 131 aaKnown RBP10.5□□□□□ -0.73
GYPC-201ENST00000259254 IGKV2D-24A0A075B6R9 120 aa10.49□□□□□ -0.73
GYPC-201ENST00000259254 SCGB1D1O95968 90 aa10.49□□□□□ -0.73
GYPC-201ENST00000259254 XCL1P47992 114 aa10.49□□□□□ -0.73
GYPC-201ENST00000259254 CHCHD10Q8WYQ3 142 aaPredicted RBP10.49□□□□□ -0.73
GYPC-201ENST00000259254 C1orf43Q9BWL3 253 aa10.49□□□□□ -0.73
GYPC-201ENST00000259254 TRAV8-4A0A0B4J246 113 aa10.48□□□□□ -0.73
GYPC-201ENST00000259254 DPM2O94777 84 aa10.48□□□□□ -0.73
GYPC-201ENST00000259254 SEC11AP67812 179 aa10.48□□□□□ -0.73
GYPC-201ENST00000259254 LINC00242Q5T6M2 205 aa10.48□□□□□ -0.73
GYPC-201ENST00000259254 LINC01545Q5VT33 79 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 154 ms