RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 COL6A6A6NMZ7 2263 aa8.32□□□□□ -1.08
TROAP-201ENST00000257909 DOPEY2Q9Y3R5 2298 aa8.32□□□□□ -1.08
TROAP-201ENST00000257909 HTN1P15515 57 aa8.32□□□□□ -1.08
TROAP-201ENST00000257909 MALP21145 153 aa8.32□□□□□ -1.08
TROAP-201ENST00000257909 COX6A2Q02221 97 aa8.32□□□□□ -1.08
TROAP-201ENST00000257909 HIST2H2BCQ6DN03 193 aa8.32□□□□□ -1.08
TROAP-201ENST00000257909 HIST2H2BDQ6DRA6 164 aa8.32□□□□□ -1.08
TROAP-201ENST00000257909 OVOL2Q9BRP0 275 aa8.32□□□□□ -1.08
TROAP-201ENST00000257909 NACAE9PAV3 2078 aa8.32□□□□□ -1.08
TROAP-201ENST00000257909 A0A0U1RRA0 63 aa8.31□□□□□ -1.08
TROAP-201ENST00000257909 KNCNA6PVL3 124 aa8.31□□□□□ -1.08
TROAP-201ENST00000257909 RBMY1A1P0DJD3 496 aaKnown RBP8.31□□□□□ -1.08
TROAP-201ENST00000257909 RBMY1CP0DJD4 496 aa8.31□□□□□ -1.08
TROAP-201ENST00000257909 RBMY1FQ15415 496 aaKnown RBP8.31□□□□□ -1.08
TROAP-201ENST00000257909 Q6ZSN1 163 aa8.31□□□□□ -1.08
TROAP-201ENST00000257909 FAM19A3Q7Z5A8 133 aa8.31□□□□□ -1.08
TROAP-201ENST00000257909 Q9UF83 564 aa8.31□□□□□ -1.08
TROAP-201ENST00000257909 KLK5Q9Y337 293 aaPredicted RBP8.31□□□□□ -1.08
TROAP-201ENST00000257909 IGF2RP11717 2491 aa8.31□□□□□ -1.08
TROAP-201ENST00000257909 HIVEP3Q5T1R4 2406 aa8.31□□□□□ -1.08
TROAP-201ENST00000257909 F5H768 121 aa8.31□□□□□ -1.08
TROAP-201ENST00000257909 IGHV3-53P01767 116 aa8.31□□□□□ -1.08
TROAP-201ENST00000257909 LINC00242Q5T6M2 205 aa8.31□□□□□ -1.08
TROAP-201ENST00000257909 PRIMA1Q86XR5 153 aa8.31□□□□□ -1.08
TROAP-201ENST00000257909 FAM218AQ96MZ4 157 aa8.31□□□□□ -1.08
TROAP-201ENST00000257909 IGHV3OR16-12A0A075B7B8 117 aa8.3□□□□□ -1.08
TROAP-201ENST00000257909 TRAV13-2A0A0B4J235 113 aa8.3□□□□□ -1.08
TROAP-201ENST00000257909 PSMB8P28062 276 aa8.3□□□□□ -1.08
TROAP-201ENST00000257909 RPL28P46779 137 aaKnown RBP8.3□□□□□ -1.08
TROAP-201ENST00000257909 IGHV3-38A0A0C4DH36 116 aa8.3□□□□□ -1.08
TROAP-201ENST00000257909 SMIM1B2RUZ4 78 aa8.3□□□□□ -1.08
TROAP-201ENST00000257909 IGHV4-38-2P0DP08 117 aa8.29□□□□□ -1.08
TROAP-201ENST00000257909 NBL1P41271 181 aa8.29□□□□□ -1.08
TROAP-201ENST00000257909 RPL18AQ02543 176 aaKnown RBP8.29□□□□□ -1.08
TROAP-201ENST00000257909 DNAL4O96015 105 aa8.29□□□□□ -1.08
TROAP-201ENST00000257909 hADV29S1A0JD25 119 aa8.27□□□□□ -1.09
TROAP-201ENST00000257909 TMEM89A2RUT3 159 aa8.27□□□□□ -1.09
TROAP-201ENST00000257909 CRPP02741 224 aa8.27□□□□□ -1.09
TROAP-201ENST00000257909 Q9HAA7 133 aa8.27□□□□□ -1.09
TROAP-201ENST00000257909 A8MTW9 85 aa8.27□□□□□ -1.09
TROAP-201ENST00000257909 TMEM258P61165 79 aa8.27□□□□□ -1.09
TROAP-201ENST00000257909 Q6JHZ5 121 aa8.27□□□□□ -1.09
TROAP-201ENST00000257909 KIR2DL5BQ8NHK3 375 aa8.27□□□□□ -1.09
TROAP-201ENST00000257909 SYNJ2BPP57105 145 aa8.26□□□□□ -1.09
TROAP-201ENST00000257909 KLRB1Q12918 225 aa8.26□□□□□ -1.09
TROAP-201ENST00000257909 SERP2Q8N6R1 65 aa8.26□□□□□ -1.09
TROAP-201ENST00000257909 MRAPQ8TCY5 172 aa8.26□□□□□ -1.09
TROAP-201ENST00000257909 TRAV13-1A0A0B4J241 112 aa8.25□□□□□ -1.09
TROAP-201ENST00000257909 F8WDY8 70 aa8.25□□□□□ -1.09
TROAP-201ENST00000257909 SPTAN1Q13813 2472 aaKnown RBP8.25□□□□□ -1.09
TROAP-201ENST00000257909 SORL1Q92673 2214 aa8.25□□□□□ -1.09
TROAP-201ENST00000257909 RS1O15537 224 aa8.25□□□□□ -1.09
TROAP-201ENST00000257909 H0YGX0 51 aa8.24□□□□□ -1.09
TROAP-201ENST00000257909 OBSCN-AS1Q96MR7 158 aa8.24□□□□□ -1.09
TROAP-201ENST00000257909 PRM2P04554 102 aa8.24□□□□□ -1.09
TROAP-201ENST00000257909 HOXD3P31249 432 aaPredicted RBP8.24□□□□□ -1.09
TROAP-201ENST00000257909 DEFB131AP59861 70 aa8.24□□□□□ -1.09
TROAP-201ENST00000257909 C11orf72Q8NBR9 251 aa8.24□□□□□ -1.09
TROAP-201ENST00000257909 PIMREGQ9BSJ6 248 aa8.24□□□□□ -1.09
TROAP-201ENST00000257909 COL12A1Q99715 3063 aa8.23□□□□□ -1.09
TROAP-201ENST00000257909 UCNP55089 124 aa8.23□□□□□ -1.09
TROAP-201ENST00000257909 IGHV4-61A0A0C4DH41 118 aa8.23□□□□□ -1.09
TROAP-201ENST00000257909 LINC00337Q8N6G1 96 aa8.23□□□□□ -1.09
TROAP-201ENST00000257909 DPH3Q96FX2 82 aa8.23□□□□□ -1.09
TROAP-201ENST00000257909 C14orf132Q9NPU4 83 aa8.23□□□□□ -1.09
TROAP-201ENST00000257909 UPK3BQ9BT76 320 aa8.22□□□□□ -1.09
TROAP-201ENST00000257909 IGKV3D-7A0A0C4DH55 119 aa8.22□□□□□ -1.09
TROAP-201ENST00000257909 RBMY1BA6NDE4 496 aaKnown RBP8.22□□□□□ -1.09
TROAP-201ENST00000257909 RBMY1EA6NEQ0 496 aaKnown RBP8.22□□□□□ -1.09
TROAP-201ENST00000257909 RBMY1DP0C7P1 496 aaKnown RBP8.22□□□□□ -1.09
TROAP-201ENST00000257909 SND1-IT1Q9HBX3 110 aa8.22□□□□□ -1.09
TROAP-201ENST00000257909 CDC42SE2Q9NRR3 84 aa8.22□□□□□ -1.09
TROAP-201ENST00000257909 LINC00846Q9NV44 126 aa8.22□□□□□ -1.09
TROAP-201ENST00000257909 A0A087WYN8 130 aa8.21□□□□□ -1.1
TROAP-201ENST00000257909 C10orf99Q6UWK7 81 aa8.21□□□□□ -1.1
TROAP-201ENST00000257909 CYSTM1Q9H1C7 97 aa8.21□□□□□ -1.1
TROAP-201ENST00000257909 CRYBG3Q68DQ2 2970 aa8.21□□□□□ -1.1
TROAP-201ENST00000257909 IGKV2-28A0A075B6P5 120 aa8.21□□□□□ -1.1
TROAP-201ENST00000257909 IGKV2D-28P01615 120 aa8.21□□□□□ -1.1
TROAP-201ENST00000257909 MIR7-3HGQ8N6C7 128 aa8.21□□□□□ -1.1
TROAP-201ENST00000257909 SMIM11BQ8TCY0 68 aa8.21□□□□□ -1.1
TROAP-201ENST00000257909 RPL36AP83881 106 aaKnown RBP8.2□□□□□ -1.1
TROAP-201ENST00000257909 RPL36ALQ969Q0 106 aaKnown RBP8.2□□□□□ -1.1
TROAP-201ENST00000257909 TRBV10-1A0A0K0K1A3 114 aa8.2□□□□□ -1.1
TROAP-201ENST00000257909 USP17L23D6RBM5 183 aa8.2□□□□□ -1.1
TROAP-201ENST00000257909 C9orf129Q5T035 196 aaKnown RBP8.2□□□□□ -1.1
TROAP-201ENST00000257909 C19orf84I3L1E1 186 aa8.19□□□□□ -1.1
TROAP-201ENST00000257909 INSP01308 110 aa8.19□□□□□ -1.1
TROAP-201ENST00000257909 LINC01561Q8N1V8 128 aa8.19□□□□□ -1.1
TROAP-201ENST00000257909 MSMBP08118 114 aa8.19□□□□□ -1.1
TROAP-201ENST00000257909 COX7B2Q8TF08 81 aa8.19□□□□□ -1.1
TROAP-201ENST00000257909 C10orf105Q8TEF2 133 aa8.18□□□□□ -1.1
TROAP-201ENST00000257909 UBE2E2Q96LR5 201 aa8.18□□□□□ -1.1
TROAP-201ENST00000257909 Q96MF0 132 aa8.18□□□□□ -1.1
TROAP-201ENST00000257909 CELSR2Q9HCU4 2923 aa8.18□□□□□ -1.1
TROAP-201ENST00000257909 A0A087WVE0 104 aa8.18□□□□□ -1.1
TROAP-201ENST00000257909 S100A7L2Q5SY68 101 aa8.18□□□□□ -1.1
TROAP-201ENST00000257909 NTM-AS1Q6ZSK4 140 aa8.18□□□□□ -1.1
TROAP-201ENST00000257909 K7EQD1 137 aa8.17□□□□□ -1.1
TROAP-201ENST00000257909 LECT2O14960 151 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 103.4 ms