RNA–Protein interactions for RNA: ENST00000257468.11

UBQLN1-201, Transcript of ubiquilin 1, humanhuman

TSL 1 (best) BASIC

Gene UBQLN1, Length 2,299 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-201ENST00000257468 IGHV1-58A0A0C4DH39 117 aa11.84□□□□□ -0.51
UBQLN1-201ENST00000257468 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.83□□□□□ -0.52
UBQLN1-201ENST00000257468 K7EQD1 137 aa11.83□□□□□ -0.52
UBQLN1-201ENST00000257468 NDUFA7O95182 113 aa11.83□□□□□ -0.52
UBQLN1-201ENST00000257468 IGLV1-51P01701 117 aa11.83□□□□□ -0.52
UBQLN1-201ENST00000257468 VSIG2Q96IQ7 327 aa11.83□□□□□ -0.52
UBQLN1-201ENST00000257468 LITAFQ99732 161 aa11.83□□□□□ -0.52
UBQLN1-201ENST00000257468 C19orf73Q9NVV2 129 aa11.83□□□□□ -0.52
UBQLN1-201ENST00000257468 PRO1854Q9UHT4 67 aa11.83□□□□□ -0.52
UBQLN1-201ENST00000257468 TMEM238C9JI98 176 aa11.82□□□□□ -0.52
UBQLN1-201ENST00000257468 SMCPP49901 116 aaPredicted RBP11.82□□□□□ -0.52
UBQLN1-201ENST00000257468 NTM-AS1Q6ZSK4 140 aa11.82□□□□□ -0.52
UBQLN1-201ENST00000257468 GEMIN7Q9H840 131 aaKnown RBP11.82□□□□□ -0.52
UBQLN1-201ENST00000257468 CDKN2A-AS1Q9UH64 79 aa11.82□□□□□ -0.52
UBQLN1-201ENST00000257468 NDUFA12Q9UI09 145 aa11.82□□□□□ -0.52
UBQLN1-201ENST00000257468 PLAC8L1A1L4L8 177 aa11.81□□□□□ -0.52
UBQLN1-201ENST00000257468 GAGE12JA6NER3 117 aa11.81□□□□□ -0.52
UBQLN1-201ENST00000257468 H7C2G1 150 aa11.81□□□□□ -0.52
UBQLN1-201ENST00000257468 GAGE4Q13068 117 aa11.81□□□□□ -0.52
UBQLN1-201ENST00000257468 GAGE5Q13069 117 aa11.81□□□□□ -0.52
UBQLN1-201ENST00000257468 ADAMTSL4-AS1Q5T5F5 129 aa11.81□□□□□ -0.52
UBQLN1-201ENST00000257468 DGAT2L7PQ6IED9 249 aa11.81□□□□□ -0.52
UBQLN1-201ENST00000257468 TCL1BO95988 128 aa11.81□□□□□ -0.52
UBQLN1-201ENST00000257468 INSL3P51460 131 aa11.81□□□□□ -0.52
UBQLN1-201ENST00000257468 COX6A2Q02221 97 aa11.81□□□□□ -0.52
UBQLN1-201ENST00000257468 ZNF418Q8TF45 676 aaPredicted RBP11.81□□□□□ -0.52
UBQLN1-201ENST00000257468 FASNP49327 2511 aaKnown RBP11.81□□□□□ -0.52
UBQLN1-201ENST00000257468 NPC2P61916 151 aa11.8□□□□□ -0.52
UBQLN1-201ENST00000257468 TRAV4A0A0B4J268 109 aa11.8□□□□□ -0.52
UBQLN1-201ENST00000257468 GAGE7O76087 117 aa11.8□□□□□ -0.52
UBQLN1-201ENST00000257468 GAGE12FP0CL80 117 aa11.8□□□□□ -0.52
UBQLN1-201ENST00000257468 GAGE12GP0CL81 117 aa11.8□□□□□ -0.52
UBQLN1-201ENST00000257468 GAGE12IP0CL82 117 aa11.8□□□□□ -0.52
UBQLN1-201ENST00000257468 HILS1P60008 231 aa11.8□□□□□ -0.52
UBQLN1-201ENST00000257468 RPL36AP83881 106 aaKnown RBP11.8□□□□□ -0.52
UBQLN1-201ENST00000257468 RPL36ALQ969Q0 106 aaKnown RBP11.8□□□□□ -0.52
UBQLN1-201ENST00000257468 LOC100131303A0A0U1RQF7 123 aa11.79□□□□□ -0.52
UBQLN1-201ENST00000257468 IGHV3-33P01772 117 aa11.78□□□□□ -0.52
UBQLN1-201ENST00000257468 PRSS2P07478 247 aa11.78□□□□□ -0.52
UBQLN1-201ENST00000257468 KRTAP10-3P60369 221 aa11.78□□□□□ -0.52
UBQLN1-201ENST00000257468 C2CD3Q4AC94 2353 aa11.78□□□□□ -0.52
UBQLN1-201ENST00000257468 TRGV2A0A075B6R0 118 aa11.77□□□□□ -0.53
UBQLN1-201ENST00000257468 SCGB1C2P0DMR2 95 aa11.77□□□□□ -0.53
UBQLN1-201ENST00000257468 CSNK1G2-AS1Q8NCQ2 148 aa11.77□□□□□ -0.53
UBQLN1-201ENST00000257468 TRBV10-1A0A0K0K1A3 114 aa11.76□□□□□ -0.53
UBQLN1-201ENST00000257468 DAZ2Q13117 558 aaKnown RBP11.76□□□□□ -0.53
UBQLN1-201ENST00000257468 TMEM101Q96IK0 257 aa11.76□□□□□ -0.53
UBQLN1-201ENST00000257468 TRAV13-1A0A0B4J241 112 aa11.76□□□□□ -0.53
UBQLN1-201ENST00000257468 A0A0B4J2C4 111 aa11.76□□□□□ -0.53
UBQLN1-201ENST00000257468 LINC00242Q5T6M2 205 aa11.76□□□□□ -0.53
UBQLN1-201ENST00000257468 ZFAND6Q6FIF0 208 aa11.76□□□□□ -0.53
UBQLN1-201ENST00000257468 DAND5Q8N907 189 aa11.76□□□□□ -0.53
UBQLN1-201ENST00000257468 C16orf74Q96GX8 76 aa11.76□□□□□ -0.53
UBQLN1-201ENST00000257468 IGLV5-45A0A087WSX0 123 aa11.75□□□□□ -0.53
UBQLN1-201ENST00000257468 LYRM7Q5U5X0 104 aa11.75□□□□□ -0.53
UBQLN1-201ENST00000257468 DAZ4Q86SG3 579 aaKnown RBP11.75□□□□□ -0.53
UBQLN1-201ENST00000257468 SBSPONQ8IVN8 264 aa11.75□□□□□ -0.53
UBQLN1-201ENST00000257468 DAZ3Q9NR90 486 aaKnown RBP11.75□□□□□ -0.53
UBQLN1-201ENST00000257468 ERG28Q9UKR5 140 aa11.75□□□□□ -0.53
UBQLN1-201ENST00000257468 CMC4P56277 68 aaPredicted RBP11.74□□□□□ -0.53
UBQLN1-201ENST00000257468 TIRAPP58753 221 aa11.74□□□□□ -0.53
UBQLN1-201ENST00000257468 Q1RN00 199 aa11.74□□□□□ -0.53
UBQLN1-201ENST00000257468 HIVEP2P31629 2446 aa11.73□□□□□ -0.53
UBQLN1-201ENST00000257468 GCN1Q92616 2671 aaKnown RBP11.73□□□□□ -0.53
UBQLN1-201ENST00000257468 J3QR89 54 aa11.73□□□□□ -0.53
UBQLN1-201ENST00000257468 MIAQ16674 131 aa11.73□□□□□ -0.53
UBQLN1-201ENST00000257468 SPANXDQ9BXN6 97 aa11.73□□□□□ -0.53
UBQLN1-201ENST00000257468 SPANXCQ9NY87 97 aa11.73□□□□□ -0.53
UBQLN1-201ENST00000257468 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.72□□□□□ -0.53
UBQLN1-201ENST00000257468 ZNF625Q96I27 306 aaPredicted RBP11.72□□□□□ -0.53
UBQLN1-201ENST00000257468 FAM110AQ9BQ89 295 aa11.72□□□□□ -0.53
UBQLN1-201ENST00000257468 C1QTNF4Q9BXJ3 329 aa11.72□□□□□ -0.53
UBQLN1-201ENST00000257468 HECTD1Q9ULT8 2610 aa11.72□□□□□ -0.53
UBQLN1-201ENST00000257468 TRBV20-1A0A075B6N2 111 aa11.71□□□□□ -0.53
UBQLN1-201ENST00000257468 CDC42SE2Q9NRR3 84 aa11.71□□□□□ -0.53
UBQLN1-201ENST00000257468 HERVK_113P63121 156 aa11.71□□□□□ -0.54
UBQLN1-201ENST00000257468 VWFP04275 2813 aa11.71□□□□□ -0.54
UBQLN1-201ENST00000257468 TRGV4A0A0C4DH28 118 aa11.7□□□□□ -0.54
UBQLN1-201ENST00000257468 A0A0U1RRA0 63 aa11.7□□□□□ -0.54
UBQLN1-201ENST00000257468 SMIM1B2RUZ4 78 aa11.7□□□□□ -0.54
UBQLN1-201ENST00000257468 NDUFA1O15239 70 aa11.7□□□□□ -0.54
UBQLN1-201ENST00000257468 PF4P02776 101 aa11.7□□□□□ -0.54
UBQLN1-201ENST00000257468 FOXI1Q12951 378 aa11.7□□□□□ -0.54
UBQLN1-201ENST00000257468 SPATA3Q8NHX4 192 aa11.7□□□□□ -0.54
UBQLN1-201ENST00000257468 OVOL2Q9BRP0 275 aa11.7□□□□□ -0.54
UBQLN1-201ENST00000257468 Q9H8V8 135 aa11.7□□□□□ -0.54
UBQLN1-201ENST00000257468 CSDC2Q9Y534 153 aaKnown RBP11.7□□□□□ -0.54
UBQLN1-201ENST00000257468 IGLV5-39A0A0G2JS06 123 aa11.69□□□□□ -0.54
UBQLN1-201ENST00000257468 TMEM243Q9BU79 118 aa11.69□□□□□ -0.54
UBQLN1-201ENST00000257468 GAGE12HA6NDE8 117 aa11.69□□□□□ -0.54
UBQLN1-201ENST00000257468 UBE2L6O14933 153 aa11.69□□□□□ -0.54
UBQLN1-201ENST00000257468 TRIAP1O43715 76 aa11.69□□□□□ -0.54
UBQLN1-201ENST00000257468 LY6G6DO95868 133 aa11.69□□□□□ -0.54
UBQLN1-201ENST00000257468 GTSF1LQ9H1H1 148 aa11.69□□□□□ -0.54
UBQLN1-201ENST00000257468 FHL2Q14192 279 aa11.67□□□□□ -0.54
UBQLN1-201ENST00000257468 OTOGQ6ZRI0 2925 aa11.67□□□□□ -0.54
UBQLN1-201ENST00000257468 TRBV6-4A0A1B0GX49 114 aa11.67□□□□□ -0.54
UBQLN1-201ENST00000257468 C9JAW5 83 aa11.67□□□□□ -0.54
UBQLN1-201ENST00000257468 GAGE6Q13070 117 aa11.67□□□□□ -0.54
UBQLN1-201ENST00000257468 FAM19A3Q7Z5A8 133 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 96.2 ms