RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 FAM236BA0A1B0GV22 79 aa13.99□□□□□ -0.17
PTPRE-201ENST00000254667 MRGPRG-AS1Q2M3A8 158 aa13.99□□□□□ -0.17
PTPRE-201ENST00000254667 RBX1P62877 108 aa13.98□□□□□ -0.17
PTPRE-201ENST00000254667 NRACQ8N912 160 aa13.98□□□□□ -0.17
PTPRE-201ENST00000254667 CRIP2P52943 208 aaPredicted RBP13.98□□□□□ -0.17
PTPRE-201ENST00000254667 PROK1P58294 105 aa13.98□□□□□ -0.17
PTPRE-201ENST00000254667 TSHBP01222 138 aa13.98□□□□□ -0.17
PTPRE-201ENST00000254667 PRR9Q5T870 116 aa13.98□□□□□ -0.17
PTPRE-201ENST00000254667 HIGD2AQ9BW72 106 aa13.98□□□□□ -0.17
PTPRE-201ENST00000254667 SYCNQ0VAF6 134 aa13.97□□□□□ -0.17
PTPRE-201ENST00000254667 C18orf65Q6ZTR6 163 aa13.97□□□□□ -0.17
PTPRE-201ENST00000254667 TIMM17BO60830 172 aa13.97□□□□□ -0.17
PTPRE-201ENST00000254667 CD164L2Q6UWJ8 174 aa13.97□□□□□ -0.17
PTPRE-201ENST00000254667 LELP1Q5T871 98 aa13.96□□□□□ -0.17
PTPRE-201ENST00000254667 LINC00643Q86TS7 51 aa13.96□□□□□ -0.17
PTPRE-201ENST00000254667 C11orf21Q9P2W6 132 aa13.96□□□□□ -0.17
PTPRE-201ENST00000254667 AVPP01185 164 aa13.96□□□□□ -0.17
PTPRE-201ENST00000254667 Q8N976 141 aa13.96□□□□□ -0.17
PTPRE-201ENST00000254667 MRPS36P82909 103 aaKnown RBP13.96□□□□□ -0.18
PTPRE-201ENST00000254667 C14orf132Q9NPU4 83 aa13.95□□□□□ -0.18
PTPRE-201ENST00000254667 KIAA1549Q9HCM3 1950 aa13.95□□□□□ -0.18
PTPRE-201ENST00000254667 HIVEP3Q5T1R4 2406 aa13.95□□□□□ -0.18
PTPRE-201ENST00000254667 CHKB-CPT1BH3BT56 60 aa13.95□□□□□ -0.18
PTPRE-201ENST00000254667 POLR2KP53803 58 aaKnown RBP13.94□□□□□ -0.18
PTPRE-201ENST00000254667 COL5A1P20908 1838 aaPredicted RBP13.94□□□□□ -0.18
PTPRE-201ENST00000254667 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.94□□□□□ -0.18
PTPRE-201ENST00000254667 IGKV2D-26A0A0A0MRZ7 120 aa13.94□□□□□ -0.18
PTPRE-201ENST00000254667 CNFNQ9BYD5 112 aa13.94□□□□□ -0.18
PTPRE-201ENST00000254667 PTPRSQ13332 1948 aa13.94□□□□□ -0.18
PTPRE-201ENST00000254667 CCDC168Q8NDH2 2452 aa13.94□□□□□ -0.18
PTPRE-201ENST00000254667 IGF2RP11717 2491 aa13.93□□□□□ -0.18
PTPRE-201ENST00000254667 BRI3O95415 125 aa13.93□□□□□ -0.18
PTPRE-201ENST00000254667 KPRPQ5T749 579 aaPredicted RBP13.93□□□□□ -0.18
PTPRE-201ENST00000254667 FAM19A1Q7Z5A9 133 aa13.93□□□□□ -0.18
PTPRE-201ENST00000254667 B5MCH6 92 aa13.93□□□□□ -0.18
PTPRE-201ENST00000254667 ZNF580Q9UK33 172 aa13.93□□□□□ -0.18
PTPRE-201ENST00000254667 G3V4G9 280 aa13.92□□□□□ -0.18
PTPRE-201ENST00000254667 H0Y9J4 135 aa13.92□□□□□ -0.18
PTPRE-201ENST00000254667 PTH2Q96A98 100 aa13.92□□□□□ -0.18
PTPRE-201ENST00000254667 WFDC10AQ9H1F0 79 aa13.91□□□□□ -0.18
PTPRE-201ENST00000254667 UBE2D4Q9Y2X8 147 aa13.91□□□□□ -0.18
PTPRE-201ENST00000254667 SORL1Q92673 2214 aa13.91□□□□□ -0.18
PTPRE-201ENST00000254667 A0A087WZ39 114 aa13.91□□□□□ -0.18
PTPRE-201ENST00000254667 BPY2O14599 106 aa13.91□□□□□ -0.18
PTPRE-201ENST00000254667 TRBV30A0A0K0K1B3 111 aa13.91□□□□□ -0.18
PTPRE-201ENST00000254667 MAPKAPK5-AS1Q8N8E1 139 aa13.91□□□□□ -0.18
PTPRE-201ENST00000254667 RNASE8Q8TDE3 154 aaKnown RBP13.9□□□□□ -0.18
PTPRE-201ENST00000254667 WFDC9Q8NEX5 89 aa13.9□□□□□ -0.18
PTPRE-201ENST00000254667 TP73-AS1Q9UF72 201 aa13.9□□□□□ -0.18
PTPRE-201ENST00000254667 MRPS12O15235 138 aaKnown RBP13.89□□□□□ -0.19
PTPRE-201ENST00000254667 XAGE1AQ9HD64 81 aa13.88□□□□□ -0.19
PTPRE-201ENST00000254667 MYO18BQ8IUG5 2567 aa13.88□□□□□ -0.19
PTPRE-201ENST00000254667 LINC00959A0A1B0GUT2 108 aa13.88□□□□□ -0.19
PTPRE-201ENST00000254667 MUC7Q8TAX7 377 aa13.88□□□□□ -0.19
PTPRE-201ENST00000254667 UBE2D3P61077 147 aa13.88□□□□□ -0.19
PTPRE-201ENST00000254667 UBE2D2P62837 147 aa13.88□□□□□ -0.19
PTPRE-201ENST00000254667 IGLV4-69A0A075B6H9 119 aa13.86□□□□□ -0.19
PTPRE-201ENST00000254667 KRTAP10-9P60411 292 aa13.86□□□□□ -0.19
PTPRE-201ENST00000254667 FAM19A5Q7Z5A7 132 aaPredicted RBP13.86□□□□□ -0.19
PTPRE-201ENST00000254667 ODF3L2Q3SX64 289 aa13.86□□□□□ -0.19
PTPRE-201ENST00000254667 ATP5EP2Q5VTU8 51 aa13.86□□□□□ -0.19
PTPRE-201ENST00000254667 TRIAP1O43715 76 aa13.85□□□□□ -0.19
PTPRE-201ENST00000254667 TRAV23DV6A0A075B6W5 121 aa13.85□□□□□ -0.19
PTPRE-201ENST00000254667 UBE2D1P51668 147 aa13.85□□□□□ -0.19
PTPRE-201ENST00000254667 LOC100131303A0A0U1RQF7 123 aa13.84□□□□□ -0.19
PTPRE-201ENST00000254667 PLXNB1O43157 2135 aa13.84□□□□□ -0.19
PTPRE-201ENST00000254667 C6orf99Q4VX62 202 aa13.84□□□□□ -0.19
PTPRE-201ENST00000254667 C7orf33Q8WU49 177 aa13.84□□□□□ -0.19
PTPRE-201ENST00000254667 IGHV4-30-4P0DP06 118 aa13.84□□□□□ -0.19
PTPRE-201ENST00000254667 M0R378 163 aa13.83□□□□□ -0.19
PTPRE-201ENST00000254667 IGLV1-51P01701 117 aa13.83□□□□□ -0.19
PTPRE-201ENST00000254667 UPK3BQ9BT76 320 aa13.83□□□□□ -0.19
PTPRE-201ENST00000254667 C16orf95Q9H693 158 aa13.83□□□□□ -0.19
PTPRE-201ENST00000254667 HCFC1P51610 2035 aa13.83□□□□□ -0.19
PTPRE-201ENST00000254667 COX17Q14061 63 aa13.83□□□□□ -0.2
PTPRE-201ENST00000254667 CLUHP3Q96NS8 147 aa13.83□□□□□ -0.2
PTPRE-201ENST00000254667 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.83□□□□□ -0.2
PTPRE-201ENST00000254667 ATG2AQ2TAZ0 1938 aa13.82□□□□□ -0.2
PTPRE-201ENST00000254667 DSCAML1Q8TD84 2053 aa13.82□□□□□ -0.2
PTPRE-201ENST00000254667 A0A1W2PPR1 153 aa13.81□□□□□ -0.2
PTPRE-201ENST00000254667 DHRS4-AS1Q9P1J3 65 aa13.81□□□□□ -0.2
PTPRE-201ENST00000254667 TEX49A0A1B0GTD5 131 aa13.81□□□□□ -0.2
PTPRE-201ENST00000254667 CDC42SE2Q9NRR3 84 aa13.81□□□□□ -0.2
PTPRE-201ENST00000254667 CHCHD7Q9BUK0 85 aa13.8□□□□□ -0.2
PTPRE-201ENST00000254667 Q8IZM0 81 aa13.8□□□□□ -0.2
PTPRE-201ENST00000254667 LOC107984640A0A0U1RRK4 108 aa13.8□□□□□ -0.2
PTPRE-201ENST00000254667 PIEZO2Q9H5I5 2752 aa13.79□□□□□ -0.2
PTPRE-201ENST00000254667 OXLD1Q5BKU9 147 aa13.79□□□□□ -0.2
PTPRE-201ENST00000254667 SLPIP03973 132 aa13.78□□□□□ -0.2
PTPRE-201ENST00000254667 SS18L2Q9UHA2 77 aa13.78□□□□□ -0.2
PTPRE-201ENST00000254667 A8MZ25 164 aa13.78□□□□□ -0.2
PTPRE-201ENST00000254667 PRM2P04554 102 aa13.78□□□□□ -0.2
PTPRE-201ENST00000254667 ZNF706Q9Y5V0 76 aaPredicted RBP13.78□□□□□ -0.2
PTPRE-201ENST00000254667 PRRC2AP48634 2157 aaKnown RBP13.78□□□□□ -0.2
PTPRE-201ENST00000254667 C5orf47Q569G3 176 aa13.77□□□□□ -0.2
PTPRE-201ENST00000254667 COX8CQ7Z4L0 72 aa13.77□□□□□ -0.2
PTPRE-201ENST00000254667 A0A0J9YWU9 116 aa13.77□□□□□ -0.21
PTPRE-201ENST00000254667 IGIPA6NJ69 53 aa13.77□□□□□ -0.21
PTPRE-201ENST00000254667 TLN1Q9Y490 2541 aaKnown RBP13.76□□□□□ -0.21
PTPRE-201ENST00000254667 SMR3AQ99954 134 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 78.6 ms