RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 TRAV12-1A0A0B4J245 112 aa8.9□□□□□ -0.98
LSM8-201ENST00000249299 RPL39P62891 51 aaKnown RBP8.9□□□□□ -0.98
LSM8-201ENST00000249299 ESRGQ1W209 222 aa8.9□□□□□ -0.98
LSM8-201ENST00000249299 DGAT2L7PQ6IED9 249 aa8.9□□□□□ -0.98
LSM8-201ENST00000249299 PET117Q6UWS5 81 aa8.9□□□□□ -0.98
LSM8-201ENST00000249299 Q6ZN92 141 aa8.9□□□□□ -0.98
LSM8-201ENST00000249299 MUC7Q8TAX7 377 aa8.9□□□□□ -0.98
LSM8-201ENST00000249299 TMEM101Q96IK0 257 aa8.9□□□□□ -0.98
LSM8-201ENST00000249299 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.89□□□□□ -0.99
LSM8-201ENST00000249299 IGKV2-29A2NJV5 120 aaPredicted RBP8.89□□□□□ -0.99
LSM8-201ENST00000249299 AMMECR1LQ6DCA0 310 aa8.89□□□□□ -0.99
LSM8-201ENST00000249299 OR5A1Q8NGJ0 315 aa8.89□□□□□ -0.99
LSM8-201ENST00000249299 OR10D4PQ8NGN7 298 aa8.89□□□□□ -0.99
LSM8-201ENST00000249299 UPK3BQ9BT76 320 aa8.89□□□□□ -0.99
LSM8-201ENST00000249299 APLNQ9ULZ1 77 aa8.89□□□□□ -0.99
LSM8-201ENST00000249299 MRPS16Q9Y3D3 137 aaKnown RBP8.89□□□□□ -0.99
LSM8-201ENST00000249299 K7EP13 123 aa8.88□□□□□ -0.99
LSM8-201ENST00000249299 DEFB104AQ8WTQ1 72 aa8.88□□□□□ -0.99
LSM8-201ENST00000249299 VCX2Q9H322 139 aa8.88□□□□□ -0.99
LSM8-201ENST00000249299 IGLV4-3A0A075B6K6 122 aa8.87□□□□□ -0.99
LSM8-201ENST00000249299 LOC105371267A0A1B0GV96 52 aa8.87□□□□□ -0.99
LSM8-201ENST00000249299 SYS1-DBNDD2H3BUS1 97 aa8.87□□□□□ -0.99
LSM8-201ENST00000249299 PRSS1P07477 247 aa8.87□□□□□ -0.99
LSM8-201ENST00000249299 C3orf79P0CE67 100 aa8.87□□□□□ -0.99
LSM8-201ENST00000249299 PMVKQ15126 192 aa8.87□□□□□ -0.99
LSM8-201ENST00000249299 AMELXQ99217 191 aa8.87□□□□□ -0.99
LSM8-201ENST00000249299 CDC42SE2Q9NRR3 84 aa8.87□□□□□ -0.99
LSM8-201ENST00000249299 A0A087WX48 190 aa8.86□□□□□ -0.99
LSM8-201ENST00000249299 C20orf202A1L168 122 aa8.86□□□□□ -0.99
LSM8-201ENST00000249299 CCL25O15444 150 aa8.86□□□□□ -0.99
LSM8-201ENST00000249299 LGALS9CQ6DKI2 356 aa8.86□□□□□ -0.99
LSM8-201ENST00000249299 TEX43Q6ZNM6 134 aa8.86□□□□□ -0.99
LSM8-201ENST00000249299 LINC00173Q6ZV60 143 aa8.86□□□□□ -0.99
LSM8-201ENST00000249299 ZNF664Q8N3J9 261 aa8.86□□□□□ -0.99
LSM8-201ENST00000249299 BAALCQ8WXS3 180 aa8.86□□□□□ -0.99
LSM8-201ENST00000249299 TMEM262E9PQX1 116 aa8.85□□□□□ -0.99
LSM8-201ENST00000249299 C3orf84H3BNL1 204 aa8.85□□□□□ -0.99
LSM8-201ENST00000249299 KRTDAPP60985 99 aa8.85□□□□□ -0.99
LSM8-201ENST00000249299 RBX1P62877 108 aa8.85□□□□□ -0.99
LSM8-201ENST00000249299 GAGE6Q13070 117 aa8.85□□□□□ -0.99
LSM8-201ENST00000249299 JOSD1Q15040 202 aaPredicted RBP8.85□□□□□ -0.99
LSM8-201ENST00000249299 LINC01556Q5JQF7 62 aa8.85□□□□□ -0.99
LSM8-201ENST00000249299 LINC01545Q5VT33 79 aa8.85□□□□□ -0.99
LSM8-201ENST00000249299 FAM104AQ969W3 186 aa8.85□□□□□ -0.99
LSM8-201ENST00000249299 C2orf88Q9BSF0 95 aa8.85□□□□□ -0.99
LSM8-201ENST00000249299 CST9LQ9H4G1 147 aa8.85□□□□□ -0.99
LSM8-201ENST00000249299 DNAH10OSP0CZ25 163 aa8.84□□□□□ -0.99
LSM8-201ENST00000249299 SEC11AP67812 179 aa8.84□□□□□ -0.99
LSM8-201ENST00000249299 LINC00588Q9Y4M8 146 aa8.84□□□□□ -0.99
LSM8-201ENST00000249299 PRSS29PA6NIE9 313 aa8.83□□□□□ -1
LSM8-201ENST00000249299 ODF1Q14990 250 aa8.83□□□□□ -1
LSM8-201ENST00000249299 MPV17L2Q567V2 206 aa8.83□□□□□ -1
LSM8-201ENST00000249299 FAM19A3Q7Z5A8 133 aa8.83□□□□□ -1
LSM8-201ENST00000249299 DYNC2H1Q8NCM8 4307 aaKnown RBP8.83□□□□□ -1
LSM8-201ENST00000249299 DNAH7Q8WXX0 4024 aa8.83□□□□□ -1
LSM8-201ENST00000249299 TGP01266 2768 aa8.82□□□□□ -1
LSM8-201ENST00000249299 F8VRH5 84 aa8.82□□□□□ -1
LSM8-201ENST00000249299 PLNP26678 52 aa8.82□□□□□ -1
LSM8-201ENST00000249299 Q6ZUT4 128 aa8.82□□□□□ -1
LSM8-201ENST00000249299 IGLV4-60A0A075B6I1 120 aa8.81□□□□□ -1
LSM8-201ENST00000249299 SIVA1O15304 175 aa8.81□□□□□ -1
LSM8-201ENST00000249299 C10orf126Q8N4M7 172 aa8.81□□□□□ -1
LSM8-201ENST00000249299 PRR34Q9NV39 138 aa8.81□□□□□ -1
LSM8-201ENST00000249299 TRAV9-2A0A087WT02 112 aa8.8□□□□□ -1
LSM8-201ENST00000249299 SMIM6P0DI80 62 aa8.8□□□□□ -1
LSM8-201ENST00000249299 UBE2D1P51668 147 aa8.8□□□□□ -1
LSM8-201ENST00000249299 NFE4Q86UQ8 179 aa8.8□□□□□ -1
LSM8-201ENST00000249299 WFDC10BQ8IUB3 73 aa8.8□□□□□ -1
LSM8-201ENST00000249299 Q8N976 141 aa8.8□□□□□ -1
LSM8-201ENST00000249299 OPRPNQ99935 248 aaPredicted RBP8.8□□□□□ -1
LSM8-201ENST00000249299 CHTOPQ9Y3Y2 248 aaKnown RBP8.8□□□□□ -1
LSM8-201ENST00000249299 DPM2O94777 84 aa8.8□□□□□ -1
LSM8-201ENST00000249299 SCGB1D1O95968 90 aa8.8□□□□□ -1
LSM8-201ENST00000249299 PYY3Q5JQD4 70 aa8.8□□□□□ -1
LSM8-201ENST00000249299 TRAV8-4A0A0B4J246 113 aa8.79□□□□□ -1
LSM8-201ENST00000249299 TINCRA0A1B0GVN0 87 aa8.79□□□□□ -1
LSM8-201ENST00000249299 ANGP03950 147 aaKnown RBP8.79□□□□□ -1
LSM8-201ENST00000249299 IGLC3P0DOY3 106 aa8.79□□□□□ -1
LSM8-201ENST00000249299 UBE2DNLQ8IWF7 75 aa8.79□□□□□ -1
LSM8-201ENST00000249299 Q9H8V8 135 aa8.79□□□□□ -1
LSM8-201ENST00000249299 MRPL35Q9NZE8 188 aaKnown RBP8.79□□□□□ -1
LSM8-201ENST00000249299 H0Y8G0 127 aa8.78□□□□□ -1
LSM8-201ENST00000249299 IGKCP01834 107 aa8.78□□□□□ -1
LSM8-201ENST00000249299 HERVK_113P63121 156 aa8.78□□□□□ -1
LSM8-201ENST00000249299 REG3AQ06141 175 aa8.78□□□□□ -1
LSM8-201ENST00000249299 SS18Q15532 418 aa8.78□□□□□ -1
LSM8-201ENST00000249299 MIAQ16674 131 aa8.78□□□□□ -1
LSM8-201ENST00000249299 CASC10Q5T4H9 136 aa8.78□□□□□ -1
LSM8-201ENST00000249299 ZFAND6Q6FIF0 208 aa8.78□□□□□ -1
LSM8-201ENST00000249299 CSMD3Q7Z407 3707 aa8.77□□□□□ -1.01
LSM8-201ENST00000249299 IGLV4-69A0A075B6H9 119 aa8.77□□□□□ -1.01
LSM8-201ENST00000249299 LINC00959A0A1B0GUT2 108 aa8.77□□□□□ -1.01
LSM8-201ENST00000249299 LINC00269Q8N2A0 174 aa8.77□□□□□ -1.01
LSM8-201ENST00000249299 KLK12Q9UKR0 248 aa8.77□□□□□ -1.01
LSM8-201ENST00000249299 IGLV5-45A0A087WSX0 123 aa8.76□□□□□ -1.01
LSM8-201ENST00000249299 TRAV8-3A0A0A6YYJ7 113 aa8.76□□□□□ -1.01
LSM8-201ENST00000249299 IBA57-AS1B1ANH7 110 aa8.76□□□□□ -1.01
LSM8-201ENST00000249299 TTC32Q5I0X7 151 aa8.76□□□□□ -1.01
LSM8-201ENST00000249299 LINC00242Q5T6M2 205 aa8.76□□□□□ -1.01
LSM8-201ENST00000249299 LINC01561Q8N1V8 128 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 82.5 ms