RNA–Protein interactions for RNA: ENST00000245544.8

NUP85-201, Transcript of nucleoporin 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP85, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP85-201ENST00000245544 CHAC1Q9BUX1 264 aa9.4□□□□□ -0.9
NUP85-201ENST00000245544 TMEM170BQ5T4T1 132 aa9.4□□□□□ -0.91
NUP85-201ENST00000245544 NFE4Q86UQ8 179 aa9.4□□□□□ -0.91
NUP85-201ENST00000245544 A0A0J9YY99 117 aa9.39□□□□□ -0.91
NUP85-201ENST00000245544 E9PLD3 99 aa9.39□□□□□ -0.91
NUP85-201ENST00000245544 PAPPA-AS1Q5QFB9 102 aa9.39□□□□□ -0.91
NUP85-201ENST00000245544 GTSF1LQ9H1H1 148 aa9.39□□□□□ -0.91
NUP85-201ENST00000245544 PRO0255Q9UI72 69 aa9.39□□□□□ -0.91
NUP85-201ENST00000245544 A0A1B0GV90 55 aa9.38□□□□□ -0.91
NUP85-201ENST00000245544 A0A096LPF7 62 aa9.38□□□□□ -0.91
NUP85-201ENST00000245544 SPART-AS1P0CW21 52 aa9.38□□□□□ -0.91
NUP85-201ENST00000245544 ZNF22P17026 224 aaPredicted RBP9.38□□□□□ -0.91
NUP85-201ENST00000245544 LBHQ53QV2 105 aaPredicted RBP9.38□□□□□ -0.91
NUP85-201ENST00000245544 VSIG2Q96IQ7 327 aa9.38□□□□□ -0.91
NUP85-201ENST00000245544 TRBV25-1A0A075B6N4 114 aa9.37□□□□□ -0.91
NUP85-201ENST00000245544 TRBV6-8A0A0A6YYG3 113 aa9.37□□□□□ -0.91
NUP85-201ENST00000245544 PAX4O43316 350 aa9.37□□□□□ -0.91
NUP85-201ENST00000245544 NPSP0C0P6 89 aa9.37□□□□□ -0.91
NUP85-201ENST00000245544 DGAT2L7PQ6IED9 249 aa9.37□□□□□ -0.91
NUP85-201ENST00000245544 TMEM243Q9BU79 118 aa9.37□□□□□ -0.91
NUP85-201ENST00000245544 TIMM21Q9BVV7 248 aa9.37□□□□□ -0.91
NUP85-201ENST00000245544 TSPEAR-AS2P59090 65 aa9.37□□□□□ -0.91
NUP85-201ENST00000245544 MRPS36P82909 103 aaKnown RBP9.37□□□□□ -0.91
NUP85-201ENST00000245544 BVES-AS1Q5T3Y7 98 aa9.37□□□□□ -0.91
NUP85-201ENST00000245544 SIVA1O15304 175 aa9.36□□□□□ -0.91
NUP85-201ENST00000245544 HTN3P15516 51 aa9.36□□□□□ -0.91
NUP85-201ENST00000245544 TMEM97Q5BJF2 176 aa9.36□□□□□ -0.91
NUP85-201ENST00000245544 IGHV3-64A0A075B6Q5 118 aa9.35□□□□□ -0.91
NUP85-201ENST00000245544 UBE2D1P51668 147 aa9.35□□□□□ -0.91
NUP85-201ENST00000245544 GAGE6Q13070 117 aa9.35□□□□□ -0.91
NUP85-201ENST00000245544 ATP6V0E2Q8NHE4 81 aa9.35□□□□□ -0.91
NUP85-201ENST00000245544 CDC42SE2Q9NRR3 84 aa9.35□□□□□ -0.91
NUP85-201ENST00000245544 TRAV26-1A0A087WT03 109 aa9.35□□□□□ -0.91
NUP85-201ENST00000245544 TMEM223A0PJW6 202 aa9.35□□□□□ -0.91
NUP85-201ENST00000245544 F5H768 121 aa9.35□□□□□ -0.91
NUP85-201ENST00000245544 UBE2L6O14933 153 aa9.35□□□□□ -0.91
NUP85-201ENST00000245544 ATP5G1P05496 136 aa9.35□□□□□ -0.91
NUP85-201ENST00000245544 C12orf74Q32Q52 190 aa9.34□□□□□ -0.91
NUP85-201ENST00000245544 CSDC2Q9Y534 153 aaKnown RBP9.34□□□□□ -0.91
NUP85-201ENST00000245544 MYMXA0A1B0GTQ4 84 aa9.34□□□□□ -0.91
NUP85-201ENST00000245544 TINCRA0A1B0GVN0 87 aa9.34□□□□□ -0.91
NUP85-201ENST00000245544 HERVK_113P61574 105 aa9.34□□□□□ -0.91
NUP85-201ENST00000245544 AMMECR1LQ6DCA0 310 aa9.34□□□□□ -0.91
NUP85-201ENST00000245544 LINC00469Q8N7U9 141 aa9.34□□□□□ -0.91
NUP85-201ENST00000245544 DNAH9Q9NYC9 4486 aa9.33□□□□□ -0.92
NUP85-201ENST00000245544 COX6A2Q02221 97 aa9.33□□□□□ -0.92
NUP85-201ENST00000245544 COL5A1-AS1Q5SY13 56 aa9.33□□□□□ -0.92
NUP85-201ENST00000245544 Q6ZVH6 145 aa9.33□□□□□ -0.92
NUP85-201ENST00000245544 OR5A1Q8NGJ0 315 aa9.33□□□□□ -0.92
NUP85-201ENST00000245544 PLEKHB2Q96CS7 222 aa9.33□□□□□ -0.92
NUP85-201ENST00000245544 CHCHD5Q9BSY4 110 aa9.33□□□□□ -0.92
NUP85-201ENST00000245544 IGLV4-60A0A075B6I1 120 aa9.32□□□□□ -0.92
NUP85-201ENST00000245544 HIGD1BQ9P298 99 aa9.32□□□□□ -0.92
NUP85-201ENST00000245544 TRAV8-3A0A0A6YYJ7 113 aa9.32□□□□□ -0.92
NUP85-201ENST00000245544 TRAV13-1A0A0B4J241 112 aa9.32□□□□□ -0.92
NUP85-201ENST00000245544 ZNF815PA8K554 130 aa9.32□□□□□ -0.92
NUP85-201ENST00000245544 K7EIL1 84 aa9.31□□□□□ -0.92
NUP85-201ENST00000245544 ZNF25P17030 456 aaPredicted RBP9.31□□□□□ -0.92
NUP85-201ENST00000245544 LINC00242Q5T6M2 205 aa9.31□□□□□ -0.92
NUP85-201ENST00000245544 CDKN2A-AS1Q9UH64 79 aa9.31□□□□□ -0.92
NUP85-201ENST00000245544 J3QQQ9 107 aa9.31□□□□□ -0.92
NUP85-201ENST00000245544 K7EP13 123 aa9.31□□□□□ -0.92
NUP85-201ENST00000245544 HSD52Q0P140 79 aa9.31□□□□□ -0.92
NUP85-201ENST00000245544 TMEM101Q96IK0 257 aa9.31□□□□□ -0.92
NUP85-201ENST00000245544 A0A0J9YWU9 116 aa9.3□□□□□ -0.92
NUP85-201ENST00000245544 H7C423 109 aa9.3□□□□□ -0.92
NUP85-201ENST00000245544 SPINK8P0C7L1 97 aa9.3□□□□□ -0.92
NUP85-201ENST00000245544 GEMIN7Q9H840 131 aaKnown RBP9.29□□□□□ -0.92
NUP85-201ENST00000245544 IGKV3OR2-268A0A0C4DH90 116 aa9.29□□□□□ -0.92
NUP85-201ENST00000245544 LEPROTO15243 131 aa9.29□□□□□ -0.92
NUP85-201ENST00000245544 IGHV3-30-3P0DP02 117 aa9.29□□□□□ -0.92
NUP85-201ENST00000245544 Q6ZTC4 211 aa9.29□□□□□ -0.92
NUP85-201ENST00000245544 DNHD1Q96M86 4753 aa9.28□□□□□ -0.92
NUP85-201ENST00000245544 TIRAPP58753 221 aa9.28□□□□□ -0.92
NUP85-201ENST00000245544 MRAPQ8TCY5 172 aa9.28□□□□□ -0.92
NUP85-201ENST00000245544 IGLV5-45A0A087WSX0 123 aa9.28□□□□□ -0.92
NUP85-201ENST00000245544 LGALS3P17931 250 aaKnown RBP9.28□□□□□ -0.92
NUP85-201ENST00000245544 GCSHP23434 173 aa9.28□□□□□ -0.92
NUP85-201ENST00000245544 FXYD2P54710 66 aa9.28□□□□□ -0.92
NUP85-201ENST00000245544 DEFB121Q5J5C9 76 aa9.28□□□□□ -0.92
NUP85-201ENST00000245544 Q8N3U1 123 aa9.28□□□□□ -0.92
NUP85-201ENST00000245544 ORAOV1Q8WV07 137 aa9.28□□□□□ -0.92
NUP85-201ENST00000245544 C11orf68Q9H3H3 251 aaKnown RBP9.28□□□□□ -0.92
NUP85-201ENST00000245544 TMEM262E9PQX1 116 aa9.27□□□□□ -0.93
NUP85-201ENST00000245544 SMAGPQ0VAQ4 97 aa9.27□□□□□ -0.93
NUP85-201ENST00000245544 SCGB1D4Q6XE38 83 aa9.27□□□□□ -0.93
NUP85-201ENST00000245544 FAM19A3Q7Z5A8 133 aa9.27□□□□□ -0.93
NUP85-201ENST00000245544 IGHV1-58A0A0C4DH39 117 aa9.26□□□□□ -0.93
NUP85-201ENST00000245544 TEX48A0A1B0GUV7 120 aa9.26□□□□□ -0.93
NUP85-201ENST00000245544 NANOS2P60321 138 aaKnown RBP9.26□□□□□ -0.93
NUP85-201ENST00000245544 COL7A1Q02388 2944 aa9.26□□□□□ -0.93
NUP85-201ENST00000245544 TAX1BP3O14907 124 aa9.26□□□□□ -0.93
NUP85-201ENST00000245544 RBX1P62877 108 aa9.26□□□□□ -0.93
NUP85-201ENST00000245544 HERVK_113P63121 156 aa9.26□□□□□ -0.93
NUP85-201ENST00000245544 KPRPQ5T749 579 aaPredicted RBP9.26□□□□□ -0.93
NUP85-201ENST00000245544 MRPL23Q16540 153 aaKnown RBP9.25□□□□□ -0.93
NUP85-201ENST00000245544 CEND1Q8N111 149 aa9.25□□□□□ -0.93
NUP85-201ENST00000245544 HIST1H4GQ99525 98 aa9.25□□□□□ -0.93
NUP85-201ENST00000245544 SEC11AP67812 179 aa9.25□□□□□ -0.93
NUP85-201ENST00000245544 C10orf126Q8N4M7 172 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 107.9 ms