RNA–Protein interactions for RNA: ENST00000234668.6

SYDE2-201, Transcript of synapse defective Rho GTPase homolog 2, humanhuman

TSL 1 (best)

Gene SYDE2, Length 3,000 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYDE2-201ENST00000234668 UBE2D4Q9Y2X8 147 aa6.6□□□□□ -1.35
SYDE2-201ENST00000234668 TRAV13-1A0A0B4J241 112 aa6.59□□□□□ -1.35
SYDE2-201ENST00000234668 NOP10Q9NPE3 64 aaKnown RBP6.59□□□□□ -1.35
SYDE2-201ENST00000234668 NDUFA12Q9UI09 145 aa6.59□□□□□ -1.35
SYDE2-201ENST00000234668 IGKV3OR2-268A0A0C4DH90 116 aa6.59□□□□□ -1.35
SYDE2-201ENST00000234668 GAGE12JA6NER3 117 aa6.59□□□□□ -1.35
SYDE2-201ENST00000234668 UBE2D3P61077 147 aa6.59□□□□□ -1.35
SYDE2-201ENST00000234668 UBE2D2P62837 147 aa6.59□□□□□ -1.35
SYDE2-201ENST00000234668 GAGE4Q13068 117 aa6.59□□□□□ -1.35
SYDE2-201ENST00000234668 GAGE5Q13069 117 aa6.59□□□□□ -1.35
SYDE2-201ENST00000234668 GEMIN7Q9H840 131 aaKnown RBP6.59□□□□□ -1.35
SYDE2-201ENST00000234668 Q8N2B8 174 aa6.58□□□□□ -1.36
SYDE2-201ENST00000234668 LOC100131303A0A0U1RQF7 123 aa6.58□□□□□ -1.36
SYDE2-201ENST00000234668 TMEM238C9JI98 176 aa6.58□□□□□ -1.36
SYDE2-201ENST00000234668 SMR3AQ99954 134 aa6.58□□□□□ -1.36
SYDE2-201ENST00000234668 C9JAW5 83 aa6.58□□□□□ -1.36
SYDE2-201ENST00000234668 IGHV3-33P01772 117 aa6.58□□□□□ -1.36
SYDE2-201ENST00000234668 CARD19Q96LW7 228 aa6.58□□□□□ -1.36
SYDE2-201ENST00000234668 SIGMAR1Q99720 223 aa6.58□□□□□ -1.36
SYDE2-201ENST00000234668 YAE1D1Q9NRH1 226 aa6.58□□□□□ -1.36
SYDE2-201ENST00000234668 ERG28Q9UKR5 140 aa6.58□□□□□ -1.36
SYDE2-201ENST00000234668 MRPS36P82909 103 aaKnown RBP6.57□□□□□ -1.36
SYDE2-201ENST00000234668 FOXI1Q12951 378 aa6.57□□□□□ -1.36
SYDE2-201ENST00000234668 FHL3Q13643 280 aa6.57□□□□□ -1.36
SYDE2-201ENST00000234668 TMEM263Q8WUH6 116 aaKnown RBP6.57□□□□□ -1.36
SYDE2-201ENST00000234668 OTOGQ6ZRI0 2925 aa6.57□□□□□ -1.36
SYDE2-201ENST00000234668 GAGE7O76087 117 aa6.57□□□□□ -1.36
SYDE2-201ENST00000234668 GAGE12FP0CL80 117 aa6.57□□□□□ -1.36
SYDE2-201ENST00000234668 GAGE12GP0CL81 117 aa6.57□□□□□ -1.36
SYDE2-201ENST00000234668 GAGE12IP0CL82 117 aa6.57□□□□□ -1.36
SYDE2-201ENST00000234668 IGHV1-58A0A0C4DH39 117 aa6.56□□□□□ -1.36
SYDE2-201ENST00000234668 TENM1Q9UKZ4 2725 aa6.56□□□□□ -1.36
SYDE2-201ENST00000234668 TRRAPQ9Y4A5 3859 aa6.56□□□□□ -1.36
SYDE2-201ENST00000234668 J3QR89 54 aa6.56□□□□□ -1.36
SYDE2-201ENST00000234668 VSIG2Q96IQ7 327 aa6.56□□□□□ -1.36
SYDE2-201ENST00000234668 LITAFQ99732 161 aa6.56□□□□□ -1.36
SYDE2-201ENST00000234668 PYGO1Q9Y3Y4 419 aa6.56□□□□□ -1.36
SYDE2-201ENST00000234668 ATRQ13535 2644 aa6.56□□□□□ -1.36
SYDE2-201ENST00000234668 A8MTW9 85 aa6.55□□□□□ -1.36
SYDE2-201ENST00000234668 RS1O15537 224 aa6.55□□□□□ -1.36
SYDE2-201ENST00000234668 NTM-AS1Q6ZSK4 140 aa6.55□□□□□ -1.36
SYDE2-201ENST00000234668 ANKRD29Q8N6D5 301 aa6.55□□□□□ -1.36
SYDE2-201ENST00000234668 LINC01006Q8NI28 216 aa6.55□□□□□ -1.36
SYDE2-201ENST00000234668 TMEM101Q96IK0 257 aa6.55□□□□□ -1.36
SYDE2-201ENST00000234668 C1QTNF4Q9BXJ3 329 aa6.55□□□□□ -1.36
SYDE2-201ENST00000234668 TRGV2A0A075B6R0 118 aa6.54□□□□□ -1.36
SYDE2-201ENST00000234668 BEAN1Q3B7T3 259 aa6.54□□□□□ -1.36
SYDE2-201ENST00000234668 CLEC2BQ92478 149 aa6.54□□□□□ -1.36
SYDE2-201ENST00000234668 TRIAP1O43715 76 aa6.54□□□□□ -1.36
SYDE2-201ENST00000234668 GIG44P09565 113 aaPredicted RBP6.54□□□□□ -1.36
SYDE2-201ENST00000234668 TINCRA0A1B0GVN0 87 aa6.53□□□□□ -1.36
SYDE2-201ENST00000234668 SLC25A20O43772 301 aa6.53□□□□□ -1.36
SYDE2-201ENST00000234668 Q9H8V8 135 aa6.53□□□□□ -1.36
SYDE2-201ENST00000234668 MT-ATP8P03928 68 aa6.53□□□□□ -1.36
SYDE2-201ENST00000234668 LINC00242Q5T6M2 205 aa6.53□□□□□ -1.36
SYDE2-201ENST00000234668 SPANXA1Q9NS26 97 aa6.53□□□□□ -1.36
SYDE2-201ENST00000234668 LRRC75A-AS1Q8N1F1 130 aa6.52□□□□□ -1.36
SYDE2-201ENST00000234668 CDIP1Q9H305 208 aa6.52□□□□□ -1.36
SYDE2-201ENST00000234668 RPL36AP83881 106 aaKnown RBP6.52□□□□□ -1.37
SYDE2-201ENST00000234668 TEN1Q86WV5 123 aa6.52□□□□□ -1.37
SYDE2-201ENST00000234668 NTN5Q8WTR8 489 aaPredicted RBP6.52□□□□□ -1.37
SYDE2-201ENST00000234668 RPL36ALQ969Q0 106 aaKnown RBP6.52□□□□□ -1.37
SYDE2-201ENST00000234668 K7EQD1 137 aa6.51□□□□□ -1.37
SYDE2-201ENST00000234668 DEFB130BP0DP73 79 aa6.51□□□□□ -1.37
SYDE2-201ENST00000234668 DEFB130AP0DP74 79 aa6.51□□□□□ -1.37
SYDE2-201ENST00000234668 GAGE6Q13070 117 aa6.51□□□□□ -1.37
SYDE2-201ENST00000234668 TRBV20-1A0A075B6N2 111 aa6.51□□□□□ -1.37
SYDE2-201ENST00000234668 TEX49A0A1B0GTD5 131 aa6.51□□□□□ -1.37
SYDE2-201ENST00000234668 C4orf48Q5BLP8 95 aa6.51□□□□□ -1.37
SYDE2-201ENST00000234668 SPATA25Q9BR10 227 aa6.51□□□□□ -1.37
SYDE2-201ENST00000234668 TOMM7Q9P0U1 55 aa6.51□□□□□ -1.37
SYDE2-201ENST00000234668 A0A096LPF7 62 aa6.5□□□□□ -1.37
SYDE2-201ENST00000234668 XGP55808 180 aa6.5□□□□□ -1.37
SYDE2-201ENST00000234668 KRTAP1-1Q07627 177 aa6.5□□□□□ -1.37
SYDE2-201ENST00000234668 LYRM7Q5U5X0 104 aa6.5□□□□□ -1.37
SYDE2-201ENST00000234668 EDA2RQ9HAV5 297 aa6.5□□□□□ -1.37
SYDE2-201ENST00000234668 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.5□□□□□ -1.37
SYDE2-201ENST00000234668 A0A0B4J2C4 111 aa6.5□□□□□ -1.37
SYDE2-201ENST00000234668 RPL13AP40429 203 aaKnown RBP6.5□□□□□ -1.37
SYDE2-201ENST00000234668 MIAQ16674 131 aa6.5□□□□□ -1.37
SYDE2-201ENST00000234668 SPATA3Q8NHX4 192 aa6.5□□□□□ -1.37
SYDE2-201ENST00000234668 PPDPFLQ8WWR9 84 aa6.5□□□□□ -1.37
SYDE2-201ENST00000234668 DNAJC30Q96LL9 226 aa6.5□□□□□ -1.37
SYDE2-201ENST00000234668 LINC01620Q4KN68 170 aa6.5□□□□□ -1.37
SYDE2-201ENST00000234668 MEIG1Q5JSS6 88 aa6.5□□□□□ -1.37
SYDE2-201ENST00000234668 ZFAND6Q6FIF0 208 aa6.5□□□□□ -1.37
SYDE2-201ENST00000234668 TRGV4A0A0C4DH28 118 aa6.49□□□□□ -1.37
SYDE2-201ENST00000234668 PIK3CD-AS1Q5SR53 167 aa6.49□□□□□ -1.37
SYDE2-201ENST00000234668 ICOSQ9Y6W8 199 aa6.49□□□□□ -1.37
SYDE2-201ENST00000234668 PLAC8L1A1L4L8 177 aa6.49□□□□□ -1.37
SYDE2-201ENST00000234668 DEFB4AO15263 64 aa6.49□□□□□ -1.37
SYDE2-201ENST00000234668 CRLF1O75462 422 aa6.49□□□□□ -1.37
SYDE2-201ENST00000234668 SOSTDC1Q6X4U4 206 aa6.49□□□□□ -1.37
SYDE2-201ENST00000234668 PRIMA1Q86XR5 153 aa6.49□□□□□ -1.37
SYDE2-201ENST00000234668 TEP1Q99973 2627 aaKnown RBP6.49□□□□□ -1.37
SYDE2-201ENST00000234668 UBE2L6O14933 153 aa6.48□□□□□ -1.37
SYDE2-201ENST00000234668 C11orf68Q9H3H3 251 aaKnown RBP6.48□□□□□ -1.37
SYDE2-201ENST00000234668 CDC42SE2Q9NRR3 84 aa6.48□□□□□ -1.37
SYDE2-201ENST00000234668 IGLV4-60A0A075B6I1 120 aa6.48□□□□□ -1.37
SYDE2-201ENST00000234668 SMIM1B2RUZ4 78 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 123.3 ms