RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 K7ENP7 123 aa10.39□□□□□ -0.75
PCDHB3-201ENST00000231130 ATP5G1P05496 136 aa10.39□□□□□ -0.75
PCDHB3-201ENST00000231130 MIAQ16674 131 aa10.39□□□□□ -0.75
PCDHB3-201ENST00000231130 FAM19A4Q96LR4 140 aa10.39□□□□□ -0.75
PCDHB3-201ENST00000231130 CRYGAP11844 174 aa10.39□□□□□ -0.75
PCDHB3-201ENST00000231130 IGHV1OR15-1A0A075B7D0 117 aa10.38□□□□□ -0.75
PCDHB3-201ENST00000231130 CIRBPQ14011 172 aaKnown RBP10.38□□□□□ -0.75
PCDHB3-201ENST00000231130 ITPR1Q14643 2758 aa10.37□□□□□ -0.75
PCDHB3-201ENST00000231130 IGHV1-69P01742 117 aa10.37□□□□□ -0.75
PCDHB3-201ENST00000231130 RPS28P62857 69 aaKnown RBP10.37□□□□□ -0.75
PCDHB3-201ENST00000231130 SNRPD3P62318 126 aaKnown RBP10.37□□□□□ -0.75
PCDHB3-201ENST00000231130 FBXL19-AS1Q494R0 122 aa10.37□□□□□ -0.75
PCDHB3-201ENST00000231130 DCANP1Q8TF63 244 aa10.37□□□□□ -0.75
PCDHB3-201ENST00000231130 TMEM258P61165 79 aa10.36□□□□□ -0.75
PCDHB3-201ENST00000231130 RPL18AQ02543 176 aaKnown RBP10.36□□□□□ -0.75
PCDHB3-201ENST00000231130 DEFB121Q5J5C9 76 aa10.36□□□□□ -0.75
PCDHB3-201ENST00000231130 HIST2H2BDQ6DRA6 164 aa10.36□□□□□ -0.75
PCDHB3-201ENST00000231130 USMG5Q96IX5 58 aa10.36□□□□□ -0.75
PCDHB3-201ENST00000231130 WIPF1O43516 503 aa10.35□□□□□ -0.75
PCDHB3-201ENST00000231130 DGAT2L7PQ6IED9 249 aa10.35□□□□□ -0.75
PCDHB3-201ENST00000231130 C2orf48Q96LS8 159 aa10.35□□□□□ -0.75
PCDHB3-201ENST00000231130 C14orf132Q9NPU4 83 aa10.35□□□□□ -0.75
PCDHB3-201ENST00000231130 IGHV4-61A0A0C4DH41 118 aa10.35□□□□□ -0.75
PCDHB3-201ENST00000231130 OXTP01178 125 aa10.35□□□□□ -0.75
PCDHB3-201ENST00000231130 PIMREGQ9BSJ6 248 aa10.35□□□□□ -0.75
PCDHB3-201ENST00000231130 IGHV1-58A0A0C4DH39 117 aa10.34□□□□□ -0.75
PCDHB3-201ENST00000231130 TINCRA0A1B0GVN0 87 aa10.34□□□□□ -0.75
PCDHB3-201ENST00000231130 LITAFQ99732 161 aa10.34□□□□□ -0.75
PCDHB3-201ENST00000231130 TRBV6-5A0A0K0K1A5 114 aa10.34□□□□□ -0.75
PCDHB3-201ENST00000231130 INAFM2P0DMQ5 153 aa10.34□□□□□ -0.75
PCDHB3-201ENST00000231130 SPANXDQ9BXN6 97 aa10.34□□□□□ -0.75
PCDHB3-201ENST00000231130 MYO18BQ8IUG5 2567 aa10.34□□□□□ -0.75
PCDHB3-201ENST00000231130 SERP2Q8N6R1 65 aa10.34□□□□□ -0.75
PCDHB3-201ENST00000231130 UTP20O75691 2785 aaKnown RBP10.33□□□□□ -0.76
PCDHB3-201ENST00000231130 COX7A2LO14548 114 aa10.33□□□□□ -0.76
PCDHB3-201ENST00000231130 APRG1Q8IVJ8 170 aa10.33□□□□□ -0.76
PCDHB3-201ENST00000231130 C9orf85Q96MD7 179 aa10.33□□□□□ -0.76
PCDHB3-201ENST00000231130 PYGO1Q9Y3Y4 419 aa10.33□□□□□ -0.76
PCDHB3-201ENST00000231130 IGHV3OR16-12A0A075B7B8 117 aa10.33□□□□□ -0.76
PCDHB3-201ENST00000231130 A0A0J9YX75 114 aa10.33□□□□□ -0.76
PCDHB3-201ENST00000231130 IGHG2P01859 326 aa10.32□□□□□ -0.76
PCDHB3-201ENST00000231130 Q8N2B8 174 aa10.32□□□□□ -0.76
PCDHB3-201ENST00000231130 CDKN2A-AS1Q9UH64 79 aa10.32□□□□□ -0.76
PCDHB3-201ENST00000231130 C5orf38Q86SI9 138 aa10.32□□□□□ -0.76
PCDHB3-201ENST00000231130 USP17L23D6RBM5 183 aa10.32□□□□□ -0.76
PCDHB3-201ENST00000231130 CXCL5P42830 114 aa10.32□□□□□ -0.76
PCDHB3-201ENST00000231130 C19orf54Q5BKX5 351 aa10.31□□□□□ -0.76
PCDHB3-201ENST00000231130 Q9H8V8 135 aa10.31□□□□□ -0.76
PCDHB3-201ENST00000231130 Q6ZSN1 163 aa10.31□□□□□ -0.76
PCDHB3-201ENST00000231130 VSIG2Q96IQ7 327 aa10.31□□□□□ -0.76
PCDHB3-201ENST00000231130 CITED2Q99967 270 aaPredicted RBP10.31□□□□□ -0.76
PCDHB3-201ENST00000231130 SPANXCQ9NY87 97 aa10.31□□□□□ -0.76
PCDHB3-201ENST00000231130 FLNCQ14315 2725 aa10.31□□□□□ -0.76
PCDHB3-201ENST00000231130 C19orf84I3L1E1 186 aa10.3□□□□□ -0.76
PCDHB3-201ENST00000231130 WFDC9Q8NEX5 89 aa10.3□□□□□ -0.76
PCDHB3-201ENST00000231130 LINC01600Q96MT4 127 aa10.3□□□□□ -0.76
PCDHB3-201ENST00000231130 FN1P02751 2386 aaKnown RBP10.3□□□□□ -0.76
PCDHB3-201ENST00000231130 DEFB131AP59861 70 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 KLK9Q2XQG4 91 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 DEFB136Q30KP8 78 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 PRIMA1Q86XR5 153 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 C20orf197Q8N268 126 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 MAPK1IP1LQ8NDC0 245 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 LINC00467Q9BRT7 94 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 EPG5Q9HCE0 2579 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 NAV2Q8IVL1 2488 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 CCDC168Q8NDH2 2452 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 TRAV23DV6A0A075B6W5 121 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 RBMY1A1P0DJD3 496 aaKnown RBP10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 RBMY1CP0DJD4 496 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 PFN2P35080 140 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 RBMY1FQ15415 496 aaKnown RBP10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 TMEM243Q9BU79 118 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 WFDC11Q8NEX6 87 aa10.29□□□□□ -0.76
PCDHB3-201ENST00000231130 IGKV3OR2-268A0A0C4DH90 116 aa10.28□□□□□ -0.76
PCDHB3-201ENST00000231130 RPL35AP18077 110 aaKnown RBP10.28□□□□□ -0.76
PCDHB3-201ENST00000231130 KHDC1LQ5JSQ8 128 aa10.28□□□□□ -0.76
PCDHB3-201ENST00000231130 LINC00308Q8TCZ7 52 aa10.28□□□□□ -0.76
PCDHB3-201ENST00000231130 A0A0U1RQV1 116 aa10.28□□□□□ -0.76
PCDHB3-201ENST00000231130 IGHV4-59P01825 116 aa10.28□□□□□ -0.76
PCDHB3-201ENST00000231130 MALP21145 153 aa10.28□□□□□ -0.76
PCDHB3-201ENST00000231130 MRPS36P82909 103 aaKnown RBP10.28□□□□□ -0.76
PCDHB3-201ENST00000231130 ABCA12Q86UK0 2595 aa10.27□□□□□ -0.76
PCDHB3-201ENST00000231130 FBN2P35556 2912 aa10.27□□□□□ -0.77
PCDHB3-201ENST00000231130 IGHV3-53P01767 116 aa10.27□□□□□ -0.77
PCDHB3-201ENST00000231130 FAM218AQ96MZ4 157 aa10.27□□□□□ -0.77
PCDHB3-201ENST00000231130 J3QLI3 93 aa10.27□□□□□ -0.77
PCDHB3-201ENST00000231130 RNASE1P07998 156 aaKnown RBP10.27□□□□□ -0.77
PCDHB3-201ENST00000231130 FAM104AQ969W3 186 aa10.27□□□□□ -0.77
PCDHB3-201ENST00000231130 CHD6Q8TD26 2715 aa10.27□□□□□ -0.77
PCDHB3-201ENST00000231130 AVPP01185 164 aa10.26□□□□□ -0.77
PCDHB3-201ENST00000231130 GHRHP01286 108 aa10.26□□□□□ -0.77
PCDHB3-201ENST00000231130 HILS1P60008 231 aa10.26□□□□□ -0.77
PCDHB3-201ENST00000231130 CFHR3Q02985 330 aa10.26□□□□□ -0.77
PCDHB3-201ENST00000231130 LINC00846Q9NV44 126 aa10.26□□□□□ -0.77
PCDHB3-201ENST00000231130 COX6A2Q02221 97 aa10.26□□□□□ -0.77
PCDHB3-201ENST00000231130 PIK3CD-AS1Q5SR53 167 aa10.26□□□□□ -0.77
PCDHB3-201ENST00000231130 Q5XG85 94 aa10.26□□□□□ -0.77
PCDHB3-201ENST00000231130 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.26□□□□□ -0.77
PCDHB3-201ENST00000231130 MRAPQ8TCY5 172 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 280.7 ms