RNA–Protein interactions for RNA: ENST00000225742.13

SMARCD2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 1 (best) BASIC

Gene SMARCD2, Length 1,800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-201ENST00000225742 SPATA25Q9BR10 227 aa15.75■□□□□ 0.11
SMARCD2-201ENST00000225742 ABCA12Q86UK0 2595 aa15.75■□□□□ 0.11
SMARCD2-201ENST00000225742 M0QXV9 152 aa15.75■□□□□ 0.11
SMARCD2-201ENST00000225742 C16orf74Q96GX8 76 aa15.75■□□□□ 0.11
SMARCD2-201ENST00000225742 GAGE12HA6NDE8 117 aa15.74■□□□□ 0.11
SMARCD2-201ENST00000225742 IGLV1-51P01701 117 aa15.74■□□□□ 0.11
SMARCD2-201ENST00000225742 IFITM1P13164 125 aa15.74■□□□□ 0.11
SMARCD2-201ENST00000225742 FOXI1Q12951 378 aa15.74■□□□□ 0.11
SMARCD2-201ENST00000225742 Q6ZTI0 123 aa15.74■□□□□ 0.11
SMARCD2-201ENST00000225742 ADARB2-AS1A8MUL3 147 aa15.73■□□□□ 0.11
SMARCD2-201ENST00000225742 NDUFA1O15239 70 aa15.73■□□□□ 0.11
SMARCD2-201ENST00000225742 ZNF418Q8TF45 676 aaPredicted RBP15.73■□□□□ 0.11
SMARCD2-201ENST00000225742 SIGMAR1Q99720 223 aa15.73■□□□□ 0.11
SMARCD2-201ENST00000225742 CDKN2A-AS1Q9UH64 79 aa15.73■□□□□ 0.11
SMARCD2-201ENST00000225742 NDUFA7O95182 113 aa15.71■□□□□ 0.11
SMARCD2-201ENST00000225742 GIG44P09565 113 aaPredicted RBP15.71■□□□□ 0.11
SMARCD2-201ENST00000225742 TEN1Q86WV5 123 aa15.71■□□□□ 0.11
SMARCD2-201ENST00000225742 GTSF1LQ9H1H1 148 aa15.71■□□□□ 0.11
SMARCD2-201ENST00000225742 TRBV30A0A0K0K1B3 111 aa15.71■□□□□ 0.1
SMARCD2-201ENST00000225742 SCGB1A1P11684 91 aa15.71■□□□□ 0.1
SMARCD2-201ENST00000225742 PPDPFLQ8WWR9 84 aa15.71■□□□□ 0.1
SMARCD2-201ENST00000225742 CENPEQ02224 2701 aa15.7■□□□□ 0.1
SMARCD2-201ENST00000225742 MYO9AB2RTY4 2548 aa15.7■□□□□ 0.1
SMARCD2-201ENST00000225742 IGLV5-39A0A0G2JS06 123 aa15.7■□□□□ 0.1
SMARCD2-201ENST00000225742 PRSS2P07478 247 aa15.7■□□□□ 0.1
SMARCD2-201ENST00000225742 ADAMTSL4-AS1Q5T5F5 129 aa15.7■□□□□ 0.1
SMARCD2-201ENST00000225742 TMEM101Q96IK0 257 aa15.7■□□□□ 0.1
SMARCD2-201ENST00000225742 OVOL2Q9BRP0 275 aa15.7■□□□□ 0.1
SMARCD2-201ENST00000225742 C19orf73Q9NVV2 129 aa15.7■□□□□ 0.1
SMARCD2-201ENST00000225742 CSMD2Q7Z408 3487 aa15.69■□□□□ 0.1
SMARCD2-201ENST00000225742 NOP10Q9NPE3 64 aaKnown RBP15.69■□□□□ 0.1
SMARCD2-201ENST00000225742 Q1RN00 199 aa15.68■□□□□ 0.1
SMARCD2-201ENST00000225742 LINC00242Q5T6M2 205 aa15.68■□□□□ 0.1
SMARCD2-201ENST00000225742 ITPR3Q14573 2671 aa15.68■□□□□ 0.1
SMARCD2-201ENST00000225742 H7C423 109 aa15.68■□□□□ 0.1
SMARCD2-201ENST00000225742 APCP25054 2843 aa15.68■□□□□ 0.1
SMARCD2-201ENST00000225742 HILS1P60008 231 aa15.68■□□□□ 0.1
SMARCD2-201ENST00000225742 CIRBPQ14011 172 aaKnown RBP15.68■□□□□ 0.1
SMARCD2-201ENST00000225742 NTM-AS1Q6ZSK4 140 aa15.68■□□□□ 0.1
SMARCD2-201ENST00000225742 PLAC8L1A1L4L8 177 aa15.67■□□□□ 0.1
SMARCD2-201ENST00000225742 ATXN8Q156A1 80 aa15.67■□□□□ 0.1
SMARCD2-201ENST00000225742 GAGE12JA6NER3 117 aa15.66■□□□□ 0.1
SMARCD2-201ENST00000225742 INSL3P51460 131 aa15.66■□□□□ 0.1
SMARCD2-201ENST00000225742 GAGE4Q13068 117 aa15.66■□□□□ 0.1
SMARCD2-201ENST00000225742 GAGE5Q13069 117 aa15.66■□□□□ 0.1
SMARCD2-201ENST00000225742 LINC01600Q96MT4 127 aa15.66■□□□□ 0.1
SMARCD2-201ENST00000225742 TRBV6-4A0A1B0GX49 114 aa15.66■□□□□ 0.1
SMARCD2-201ENST00000225742 A8MZ25 164 aa15.66■□□□□ 0.1
SMARCD2-201ENST00000225742 LINC00694P0DN24 101 aa15.66■□□□□ 0.1
SMARCD2-201ENST00000225742 COX6A2Q02221 97 aa15.66■□□□□ 0.1
SMARCD2-201ENST00000225742 HIST2H2BCQ6DN03 193 aa15.66■□□□□ 0.1
SMARCD2-201ENST00000225742 CDC42SE2Q9NRR3 84 aa15.66■□□□□ 0.1
SMARCD2-201ENST00000225742 H7C2G1 150 aa15.65■□□□□ 0.1
SMARCD2-201ENST00000225742 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.65■□□□□ 0.1
SMARCD2-201ENST00000225742 CSNK1G2-AS1Q8NCQ2 148 aa15.65■□□□□ 0.1
SMARCD2-201ENST00000225742 TMEM243Q9BU79 118 aa15.65■□□□□ 0.1
SMARCD2-201ENST00000225742 COPS9Q8WXC6 57 aa15.64■□□□□ 0.09
SMARCD2-201ENST00000225742 RPL35AP18077 110 aaKnown RBP15.64■□□□□ 0.09
SMARCD2-201ENST00000225742 TRGV2A0A075B6R0 118 aa15.63■□□□□ 0.09
SMARCD2-201ENST00000225742 SLC25A20O43772 301 aa15.63■□□□□ 0.09
SMARCD2-201ENST00000225742 UBE2L6O14933 153 aa15.62■□□□□ 0.09
SMARCD2-201ENST00000225742 J3QKU1 62 aa15.61■□□□□ 0.09
SMARCD2-201ENST00000225742 GAGE7O76087 117 aa15.61■□□□□ 0.09
SMARCD2-201ENST00000225742 GAGE12FP0CL80 117 aa15.61■□□□□ 0.09
SMARCD2-201ENST00000225742 GAGE12GP0CL81 117 aa15.61■□□□□ 0.09
SMARCD2-201ENST00000225742 GAGE12IP0CL82 117 aa15.61■□□□□ 0.09
SMARCD2-201ENST00000225742 CARD19Q96LW7 228 aa15.61■□□□□ 0.09
SMARCD2-201ENST00000225742 ICOSQ9Y6W8 199 aa15.61■□□□□ 0.09
SMARCD2-201ENST00000225742 SMIM1B2RUZ4 78 aa15.61■□□□□ 0.09
SMARCD2-201ENST00000225742 C9JAW5 83 aa15.61■□□□□ 0.09
SMARCD2-201ENST00000225742 TRIAP1O43715 76 aa15.61■□□□□ 0.09
SMARCD2-201ENST00000225742 COX6CP09669 75 aa15.61■□□□□ 0.09
SMARCD2-201ENST00000225742 PLA2G2AP14555 144 aa15.61■□□□□ 0.09
SMARCD2-201ENST00000225742 LINC01620Q4KN68 170 aa15.6■□□□□ 0.09
SMARCD2-201ENST00000225742 ANKRD29Q8N6D5 301 aa15.6■□□□□ 0.09
SMARCD2-201ENST00000225742 WFDC10AQ9H1F0 79 aa15.6■□□□□ 0.09
SMARCD2-201ENST00000225742 PPDPFQ9H3Y8 114 aa15.59■□□□□ 0.09
SMARCD2-201ENST00000225742 Q9H8V8 135 aa15.59■□□□□ 0.09
SMARCD2-201ENST00000225742 TRAV13-1A0A0B4J241 112 aa15.59■□□□□ 0.09
SMARCD2-201ENST00000225742 HERV-K104P63124 156 aa15.59■□□□□ 0.09
SMARCD2-201ENST00000225742 TRGV4A0A0C4DH28 118 aa15.58■□□□□ 0.08
SMARCD2-201ENST00000225742 AKAP9Q99996 3911 aa15.58■□□□□ 0.08
SMARCD2-201ENST00000225742 F5H768 121 aa15.57■□□□□ 0.08
SMARCD2-201ENST00000225742 TLN2Q9Y4G6 2542 aa15.57■□□□□ 0.08
SMARCD2-201ENST00000225742 WNK1Q9H4A3 2382 aa15.56■□□□□ 0.08
SMARCD2-201ENST00000225742 TRBV10-2A0A0K0K1G8 114 aa15.56■□□□□ 0.08
SMARCD2-201ENST00000225742 LINC00308Q8TCZ7 52 aa15.56■□□□□ 0.08
SMARCD2-201ENST00000225742 SONP18583 2426 aaKnown RBP15.55■□□□□ 0.08
SMARCD2-201ENST00000225742 ZNF625Q96I27 306 aaPredicted RBP15.55■□□□□ 0.08
SMARCD2-201ENST00000225742 CHD6Q8TD26 2715 aa15.55■□□□□ 0.08
SMARCD2-201ENST00000225742 FHL2Q14192 279 aa15.54■□□□□ 0.08
SMARCD2-201ENST00000225742 CDIP1Q9H305 208 aa15.54■□□□□ 0.08
SMARCD2-201ENST00000225742 EPG5Q9HCE0 2579 aa15.54■□□□□ 0.08
SMARCD2-201ENST00000225742 TMEM262E9PQX1 116 aa15.54■□□□□ 0.08
SMARCD2-201ENST00000225742 NPC2P61916 151 aa15.54■□□□□ 0.08
SMARCD2-201ENST00000225742 FLNAP21333 2647 aaKnown RBP15.53■□□□□ 0.08
SMARCD2-201ENST00000225742 RPL13AP40429 203 aaKnown RBP15.53■□□□□ 0.08
SMARCD2-201ENST00000225742 KIR2DL5BQ8NHK3 375 aa15.52■□□□□ 0.08
SMARCD2-201ENST00000225742 PRIMA1Q86XR5 153 aa15.52■□□□□ 0.07
SMARCD2-201ENST00000225742 LOC100131303A0A0U1RQF7 123 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms