RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 LINC01600Q96MT4 127 aa9.57□□□□□ -0.88
PLOD3-201ENST00000223127 M0R2P5 195 aa9.56□□□□□ -0.88
PLOD3-201ENST00000223127 TRIAP1O43715 76 aa9.56□□□□□ -0.88
PLOD3-201ENST00000223127 C16orf95Q9H693 158 aa9.56□□□□□ -0.88
PLOD3-201ENST00000223127 FAM74A4Q5TZK3 123 aa9.56□□□□□ -0.88
PLOD3-201ENST00000223127 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.55□□□□□ -0.88
PLOD3-201ENST00000223127 TRAV8-4A0A0B4J246 113 aa9.55□□□□□ -0.88
PLOD3-201ENST00000223127 Q6Q795 121 aa9.55□□□□□ -0.88
PLOD3-201ENST00000223127 C2CD3Q4AC94 2353 aa9.55□□□□□ -0.88
PLOD3-201ENST00000223127 NOTCH3Q9UM47 2321 aa9.55□□□□□ -0.88
PLOD3-201ENST00000223127 NSD1Q96L73 2696 aaPredicted RBP9.55□□□□□ -0.88
PLOD3-201ENST00000223127 JMJD1CQ15652 2540 aa9.55□□□□□ -0.88
PLOD3-201ENST00000223127 TRBV10-2A0A0K0K1G8 114 aa9.55□□□□□ -0.88
PLOD3-201ENST00000223127 H3BMM0 161 aa9.55□□□□□ -0.88
PLOD3-201ENST00000223127 UBE2WQ96B02 151 aa9.55□□□□□ -0.88
PLOD3-201ENST00000223127 A0A0J9YXV3 536 aa9.54□□□□□ -0.88
PLOD3-201ENST00000223127 A0A0J9YXY3 114 aa9.54□□□□□ -0.88
PLOD3-201ENST00000223127 IFITM1P13164 125 aa9.54□□□□□ -0.88
PLOD3-201ENST00000223127 RHOHQ15669 191 aa9.54□□□□□ -0.88
PLOD3-201ENST00000223127 MAP6D1Q9H9H5 199 aa9.54□□□□□ -0.88
PLOD3-201ENST00000223127 MDFICQ9P1T7 246 aa9.54□□□□□ -0.88
PLOD3-201ENST00000223127 TRBV30A0A0K0K1B3 111 aa9.54□□□□□ -0.88
PLOD3-201ENST00000223127 ZNF56Q15929 161 aa9.54□□□□□ -0.88
PLOD3-201ENST00000223127 C15orf53Q8NAA6 179 aa9.54□□□□□ -0.88
PLOD3-201ENST00000223127 LITAFQ99732 161 aa9.54□□□□□ -0.88
PLOD3-201ENST00000223127 IGLV4-3A0A075B6K6 122 aa9.53□□□□□ -0.88
PLOD3-201ENST00000223127 GAGE12JA6NER3 117 aa9.53□□□□□ -0.88
PLOD3-201ENST00000223127 M0QY20 66 aa9.53□□□□□ -0.88
PLOD3-201ENST00000223127 GAGE7O76087 117 aa9.53□□□□□ -0.88
PLOD3-201ENST00000223127 PRM2P04554 102 aa9.53□□□□□ -0.88
PLOD3-201ENST00000223127 GAGE12FP0CL80 117 aa9.53□□□□□ -0.88
PLOD3-201ENST00000223127 GAGE12GP0CL81 117 aa9.53□□□□□ -0.88
PLOD3-201ENST00000223127 GAGE12IP0CL82 117 aa9.53□□□□□ -0.88
PLOD3-201ENST00000223127 GAGE4Q13068 117 aa9.53□□□□□ -0.88
PLOD3-201ENST00000223127 TTC32Q5I0X7 151 aa9.53□□□□□ -0.88
PLOD3-201ENST00000223127 ADARB2-AS1A8MUL3 147 aa9.52□□□□□ -0.88
PLOD3-201ENST00000223127 PROK1P58294 105 aa9.52□□□□□ -0.88
PLOD3-201ENST00000223127 RBMY1BA6NDE4 496 aaKnown RBP9.52□□□□□ -0.89
PLOD3-201ENST00000223127 RBMY1EA6NEQ0 496 aaKnown RBP9.52□□□□□ -0.89
PLOD3-201ENST00000223127 RBMY1DP0C7P1 496 aaKnown RBP9.52□□□□□ -0.89
PLOD3-201ENST00000223127 RBMY1A1P0DJD3 496 aaKnown RBP9.52□□□□□ -0.89
PLOD3-201ENST00000223127 RBMY1CP0DJD4 496 aa9.52□□□□□ -0.89
PLOD3-201ENST00000223127 RBMY1FQ15415 496 aaKnown RBP9.52□□□□□ -0.89
PLOD3-201ENST00000223127 C9orf85Q96MD7 179 aa9.52□□□□□ -0.89
PLOD3-201ENST00000223127 C20orf203Q8NBC4 194 aa9.52□□□□□ -0.89
PLOD3-201ENST00000223127 IGHV1OR15-1A0A075B7D0 117 aa9.51□□□□□ -0.89
PLOD3-201ENST00000223127 ICOSQ9Y6W8 199 aa9.51□□□□□ -0.89
PLOD3-201ENST00000223127 IGHV3-16A0A0C4DH30 117 aa9.51□□□□□ -0.89
PLOD3-201ENST00000223127 IGHV3-30-3P0DP02 117 aa9.51□□□□□ -0.89
PLOD3-201ENST00000223127 H7C423 109 aa9.5□□□□□ -0.89
PLOD3-201ENST00000223127 C2orf82Q6UX34 121 aa9.5□□□□□ -0.89
PLOD3-201ENST00000223127 KRTAP10-3P60369 221 aa9.5□□□□□ -0.89
PLOD3-201ENST00000223127 ODF3L2Q3SX64 289 aa9.5□□□□□ -0.89
PLOD3-201ENST00000223127 NDUFA7O95182 113 aa9.49□□□□□ -0.89
PLOD3-201ENST00000223127 TIMM21Q9BVV7 248 aa9.49□□□□□ -0.89
PLOD3-201ENST00000223127 TRAV8-3A0A0A6YYJ7 113 aa9.49□□□□□ -0.89
PLOD3-201ENST00000223127 H3BT86 120 aa9.48□□□□□ -0.89
PLOD3-201ENST00000223127 ADAMTSL4-AS1Q5T5F5 129 aa9.48□□□□□ -0.89
PLOD3-201ENST00000223127 CLEC2BQ92478 149 aa9.48□□□□□ -0.89
PLOD3-201ENST00000223127 FAM104AQ969W3 186 aa9.48□□□□□ -0.89
PLOD3-201ENST00000223127 SPXQ9BT56 116 aa9.48□□□□□ -0.89
PLOD3-201ENST00000223127 SPANXDQ9BXN6 97 aa9.48□□□□□ -0.89
PLOD3-201ENST00000223127 SPANXCQ9NY87 97 aa9.48□□□□□ -0.89
PLOD3-201ENST00000223127 I3L3M4 83 aa9.47□□□□□ -0.89
PLOD3-201ENST00000223127 XCL2Q9UBD3 114 aa9.47□□□□□ -0.89
PLOD3-201ENST00000223127 F8P00451 2351 aa9.47□□□□□ -0.89
PLOD3-201ENST00000223127 FAM110AQ9BQ89 295 aa9.47□□□□□ -0.89
PLOD3-201ENST00000223127 NPC2P61916 151 aa9.46□□□□□ -0.89
PLOD3-201ENST00000223127 STHQ8IWL8 128 aa9.46□□□□□ -0.89
PLOD3-201ENST00000223127 WFDC10AQ9H1F0 79 aa9.46□□□□□ -0.89
PLOD3-201ENST00000223127 IGHV3OR16-12A0A075B7B8 117 aa9.46□□□□□ -0.9
PLOD3-201ENST00000223127 PRSS2P07478 247 aa9.46□□□□□ -0.9
PLOD3-201ENST00000223127 MIAQ16674 131 aa9.46□□□□□ -0.9
PLOD3-201ENST00000223127 SMIM20Q8N5G0 67 aa9.46□□□□□ -0.9
PLOD3-201ENST00000223127 TRAV25A0A0B4J276 109 aa9.45□□□□□ -0.9
PLOD3-201ENST00000223127 MRPS36P82909 103 aaKnown RBP9.45□□□□□ -0.9
PLOD3-201ENST00000223127 MRPL23Q16540 153 aaKnown RBP9.45□□□□□ -0.9
PLOD3-201ENST00000223127 LINC01587Q99440 93 aa9.45□□□□□ -0.9
PLOD3-201ENST00000223127 LST1O00453 97 aa9.45□□□□□ -0.9
PLOD3-201ENST00000223127 PF4P02776 101 aa9.45□□□□□ -0.9
PLOD3-201ENST00000223127 RNASE13Q5GAN3 156 aaKnown RBP9.45□□□□□ -0.9
PLOD3-201ENST00000223127 NDUFA12Q9UI09 145 aa9.45□□□□□ -0.9
PLOD3-201ENST00000223127 FAM240AA0A1B0GVK7 77 aa9.45□□□□□ -0.9
PLOD3-201ENST00000223127 CEMP1Q6PRD7 247 aaPredicted RBP9.45□□□□□ -0.9
PLOD3-201ENST00000223127 TRGV11A0A075B6L2 103 aa9.44□□□□□ -0.9
PLOD3-201ENST00000223127 IGHV1-58A0A0C4DH39 117 aa9.44□□□□□ -0.9
PLOD3-201ENST00000223127 A8MZ25 164 aa9.44□□□□□ -0.9
PLOD3-201ENST00000223127 TENM1Q9UKZ4 2725 aa9.44□□□□□ -0.9
PLOD3-201ENST00000223127 HERV-K104P63124 156 aa9.44□□□□□ -0.9
PLOD3-201ENST00000223127 DEFB121Q5J5C9 76 aa9.44□□□□□ -0.9
PLOD3-201ENST00000223127 SHISA2Q6UWI4 295 aa9.44□□□□□ -0.9
PLOD3-201ENST00000223127 ATRQ13535 2644 aa9.44□□□□□ -0.9
PLOD3-201ENST00000223127 IGHV3-73A0A0B4J1V6 119 aa9.43□□□□□ -0.9
PLOD3-201ENST00000223127 A8MTW9 85 aa9.43□□□□□ -0.9
PLOD3-201ENST00000223127 VWFP04275 2813 aa9.43□□□□□ -0.9
PLOD3-201ENST00000223127 COX6CP09669 75 aa9.43□□□□□ -0.9
PLOD3-201ENST00000223127 PYGO1Q9Y3Y4 419 aa9.43□□□□□ -0.9
PLOD3-201ENST00000223127 IGLV1-51P01701 117 aa9.42□□□□□ -0.9
PLOD3-201ENST00000223127 TRBV7-7A0A0K0K1E9 115 aa9.42□□□□□ -0.9
PLOD3-201ENST00000223127 INSP01308 110 aa9.42□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms