RNA–Protein interactions for RNA: ENST00000216414.12

CDKN3-201, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 1 (best)

Gene CDKN3, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-201ENST00000216414 LOC285556D6RIA3 1793 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 KIDINS220Q9ULH0 1771 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 DLEC1Q9Y238 1755 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 COL24A1Q17RW2 1714 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 E9PCH4 1651 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 USP54Q70EL1 1684 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 RREB1Q92766 1687 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 HECW1Q76N89 1606 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 FRMPD1Q5SYB0 1578 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 NRKQ7Z2Y5 1582 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 BAZ1AQ9NRL2 1556 aaPredicted RBP0.24□□□□□ -2.37
CDKN3-201ENST00000216414 ADGRB3O60242 1522 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 MYOM2P54296 1465 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 PXDNQ92626 1479 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 ARAP1Q96P48 1450 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 FYCO1Q9BQS8 1478 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 CACNA1BQ00975 2339 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 CNTRLQ7Z7A1 2325 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 ANKRD36BQ8N2N9 1353 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 CADP27708 2225 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 A0A087WXM4 84 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 A0A0G2JND7 137 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 A0A1B0GU69 56 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 A0A1B0GUT8 65 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 LOC105371267A0A1B0GV96 52 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 PVALEFA0A1B0GWK0 134 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 K7EIL1 84 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 HMGN4O00479 90 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 NDUFA2O43678 99 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 BCE1O60756 84 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 LY6G6CO95867 125 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 TFF1P04155 84 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 ARMS2P0C7Q2 107 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 IFI27P40305 119 aaPredicted RBP0.24□□□□□ -2.37
CDKN3-201ENST00000216414 CCL18P55774 89 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 PKIAP61925 76 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 Q0VG73 95 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 WFDC2Q14508 124 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 ADIRFQ15847 76 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 DEFB109BQ30KR1 87 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 HEPN1Q6WQI6 88 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 SSBP3-AS1Q7Z2R9 100 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 LINC01558Q9Y6Z2 57 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 DOCK11Q5JSL3 2073 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 MYH6P13533 1939 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 LAMA4Q16363 1823 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 TNS1Q9HBL0 1735 aaKnown RBP0.24□□□□□ -2.37
CDKN3-201ENST00000216414 NRXN2Q9P2S2 1712 aa0.24□□□□□ -2.37
CDKN3-201ENST00000216414 ZNF142P52746 1687 aaPredicted RBP0.24□□□□□ -2.37
CDKN3-201ENST00000216414 PTPRZ1P23471 2315 aaPredicted RBP0.24□□□□□ -2.37
CDKN3-201ENST00000216414 KIAA0100Q14667 2235 aaKnown RBP0.23□□□□□ -2.37
CDKN3-201ENST00000216414 NLRP1Q9C000 1473 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 CLIP1P30622 1438 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 CASKIN1Q8WXD9 1431 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 SCAPERQ9BY12 1400 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 SBF2Q86WG5 1849 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 WNK3Q9BYP7 1800 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 TRBV25-1A0A075B6N4 114 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 A0A096LNT2 108 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 GVQW2A0A096LPI5 108 aaPredicted RBP0.23□□□□□ -2.37
CDKN3-201ENST00000216414 TRBV7-7A0A0K0K1E9 115 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 NBDYA0A0U1RRE5 68 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 hADV29S1A0JD25 119 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 C7orf77A4D0Y5 90 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 B4DSR2 109 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 H0Y9P7 68 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 IGLC1P0CG04 106 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 SNRPFP62306 86 aaKnown RBP0.23□□□□□ -2.37
CDKN3-201ENST00000216414 PYY3Q5JQD4 70 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 SERP2Q8N6R1 65 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 DPH3P1Q9H4G8 78 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 LINC00846Q9NV44 126 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 CACFD1Q9UGQ2 172 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 CDKN2A-AS1Q9UH64 79 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 AHCTF1Q8WYP5 2266 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 DOPEY2Q9Y3R5 2298 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 KNTC1P50748 2209 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 RIMS1Q86UR5 1692 aaKnown RBP0.23□□□□□ -2.37
CDKN3-201ENST00000216414 LRP5O75197 1615 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 RAPGEF6Q8TEU7 1601 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 SYNJ1O43426 1573 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 ARHGAP5Q13017 1502 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 ZDBF2Q9HCK1 2354 aa0.23□□□□□ -2.37
CDKN3-201ENST00000216414 ROS1P08922 2347 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 A2ML1A8K2U0 1454 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 MRC1P22897 1456 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 GAPVD1Q14C86 1478 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 RAPGEF2Q9Y4G8 1499 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 UBR3Q6ZT12 1888 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 C10orf71Q711Q0 1435 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 CNTLNQ9NXG0 1405 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 XIRP1Q702N8 1843 aaKnown RBP0.22□□□□□ -2.37
CDKN3-201ENST00000216414 MUC5ACP98088 5654 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 ESPL1Q14674 2120 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 A0A0G2JMZ2 1700 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 NALCNQ8IZF0 1738 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 CPSF4LA6NMK7 179 aaKnown RBP0.22□□□□□ -2.37
CDKN3-201ENST00000216414 CEBPZOSA8MTT3 80 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 OOSP1A8MZH6 123 aa0.22□□□□□ -2.37
CDKN3-201ENST00000216414 HMGN2P05204 90 aaKnown RBP0.22□□□□□ -2.37
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms