RNA–Protein interactions for RNA: ENST00000057513.7

TNIP3-201, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP3, Length 2,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-201ENST00000057513 CREBBPQ92793 2442 aa9.89□□□□□ -0.83
TNIP3-201ENST00000057513 A6NDX4 124 aa9.89□□□□□ -0.83
TNIP3-201ENST00000057513 INAFM2P0DMQ5 153 aa9.89□□□□□ -0.83
TNIP3-201ENST00000057513 HIST1H4AP62805 103 aaKnown RBP9.89□□□□□ -0.83
TNIP3-201ENST00000057513 FAM222AQ5U5X8 452 aa9.89□□□□□ -0.83
TNIP3-201ENST00000057513 CRYBG3Q68DQ2 2970 aa9.89□□□□□ -0.83
TNIP3-201ENST00000057513 IGHV3OR16-12A0A075B7B8 117 aa9.88□□□□□ -0.83
TNIP3-201ENST00000057513 hADV29S1A0JD25 119 aa9.88□□□□□ -0.83
TNIP3-201ENST00000057513 ATP5J2P56134 94 aa9.88□□□□□ -0.83
TNIP3-201ENST00000057513 ATRXP46100 2492 aa9.88□□□□□ -0.83
TNIP3-201ENST00000057513 CFHR3Q02985 330 aa9.88□□□□□ -0.83
TNIP3-201ENST00000057513 C5orf47Q569G3 176 aa9.88□□□□□ -0.83
TNIP3-201ENST00000057513 LINC00242Q5T6M2 205 aa9.88□□□□□ -0.83
TNIP3-201ENST00000057513 DGAT2L7PQ6IED9 249 aa9.88□□□□□ -0.83
TNIP3-201ENST00000057513 CYSTM1Q9H1C7 97 aa9.88□□□□□ -0.83
TNIP3-201ENST00000057513 SMIM9A6NGZ8 99 aa9.87□□□□□ -0.83
TNIP3-201ENST00000057513 ATOX1O00244 68 aa9.87□□□□□ -0.83
TNIP3-201ENST00000057513 COPS9Q8WXC6 57 aa9.87□□□□□ -0.83
TNIP3-201ENST00000057513 MALP21145 153 aa9.87□□□□□ -0.83
TNIP3-201ENST00000057513 HOXD3P31249 432 aaPredicted RBP9.87□□□□□ -0.83
TNIP3-201ENST00000057513 PRIMA1Q86XR5 153 aa9.87□□□□□ -0.83
TNIP3-201ENST00000057513 SMIM1B2RUZ4 78 aa9.86□□□□□ -0.83
TNIP3-201ENST00000057513 RS1O15537 224 aa9.86□□□□□ -0.83
TNIP3-201ENST00000057513 PIK3CD-AS1Q5SR53 167 aa9.86□□□□□ -0.83
TNIP3-201ENST00000057513 RNF152Q8N8N0 203 aa9.86□□□□□ -0.83
TNIP3-201ENST00000057513 TRAV13-1A0A0B4J241 112 aa9.86□□□□□ -0.83
TNIP3-201ENST00000057513 C10orf99Q6UWK7 81 aa9.86□□□□□ -0.83
TNIP3-201ENST00000057513 K7ENP7 123 aa9.85□□□□□ -0.83
TNIP3-201ENST00000057513 SYNJ2BPP57105 145 aa9.85□□□□□ -0.83
TNIP3-201ENST00000057513 KLRB1Q12918 225 aa9.85□□□□□ -0.83
TNIP3-201ENST00000057513 HIST2H2BCQ6DN03 193 aa9.85□□□□□ -0.83
TNIP3-201ENST00000057513 HIST2H2BDQ6DRA6 164 aa9.85□□□□□ -0.83
TNIP3-201ENST00000057513 PRORYQ9H606 182 aa9.85□□□□□ -0.83
TNIP3-201ENST00000057513 C9orf129Q5T035 196 aaKnown RBP9.84□□□□□ -0.83
TNIP3-201ENST00000057513 IGHV3-53P01767 116 aa9.84□□□□□ -0.83
TNIP3-201ENST00000057513 PSMB8P28062 276 aa9.84□□□□□ -0.83
TNIP3-201ENST00000057513 RPS28P62857 69 aaKnown RBP9.83□□□□□ -0.84
TNIP3-201ENST00000057513 RPL18AQ02543 176 aaKnown RBP9.83□□□□□ -0.84
TNIP3-201ENST00000057513 IGKV3D-7A0A0C4DH55 119 aa9.83□□□□□ -0.84
TNIP3-201ENST00000057513 DNAL4O96015 105 aa9.83□□□□□ -0.84
TNIP3-201ENST00000057513 PIMREGQ9BSJ6 248 aa9.83□□□□□ -0.84
TNIP3-201ENST00000057513 C14orf132Q9NPU4 83 aa9.82□□□□□ -0.84
TNIP3-201ENST00000057513 RPL28P46779 137 aaKnown RBP9.82□□□□□ -0.84
TNIP3-201ENST00000057513 ZNF415Q09FC8 603 aa9.82□□□□□ -0.84
TNIP3-201ENST00000057513 KIR2DL5BQ8NHK3 375 aa9.81□□□□□ -0.84
TNIP3-201ENST00000057513 HIVEP3Q5T1R4 2406 aa9.81□□□□□ -0.84
TNIP3-201ENST00000057513 CSPG4Q6UVK1 2322 aa9.81□□□□□ -0.84
TNIP3-201ENST00000057513 A0A087WVE0 104 aa9.81□□□□□ -0.84
TNIP3-201ENST00000057513 A0A087WYN8 130 aa9.81□□□□□ -0.84
TNIP3-201ENST00000057513 RBMY1BA6NDE4 496 aaKnown RBP9.81□□□□□ -0.84
TNIP3-201ENST00000057513 RBMY1EA6NEQ0 496 aaKnown RBP9.81□□□□□ -0.84
TNIP3-201ENST00000057513 RBMY1DP0C7P1 496 aaKnown RBP9.81□□□□□ -0.84
TNIP3-201ENST00000057513 LINC00337Q8N6G1 96 aa9.81□□□□□ -0.84
TNIP3-201ENST00000057513 TRAV13-2A0A0B4J235 113 aa9.8□□□□□ -0.84
TNIP3-201ENST00000057513 IGHV4-61A0A0C4DH41 118 aa9.8□□□□□ -0.84
TNIP3-201ENST00000057513 CRPP02741 224 aa9.8□□□□□ -0.84
TNIP3-201ENST00000057513 DEFB131AP59861 70 aa9.8□□□□□ -0.84
TNIP3-201ENST00000057513 F5H768 121 aa9.8□□□□□ -0.84
TNIP3-201ENST00000057513 LINC00846Q9NV44 126 aa9.8□□□□□ -0.84
TNIP3-201ENST00000057513 FAM19A3Q7Z5A8 133 aa9.79□□□□□ -0.84
TNIP3-201ENST00000057513 OR13C6PQ8NH95 151 aa9.79□□□□□ -0.84
TNIP3-201ENST00000057513 DPH3Q96FX2 82 aa9.79□□□□□ -0.84
TNIP3-201ENST00000057513 PF4P02776 101 aa9.78□□□□□ -0.84
TNIP3-201ENST00000057513 SERP2Q8N6R1 65 aa9.78□□□□□ -0.84
TNIP3-201ENST00000057513 C11orf72Q8NBR9 251 aa9.78□□□□□ -0.84
TNIP3-201ENST00000057513 IGKV2-28A0A075B6P5 120 aa9.78□□□□□ -0.84
TNIP3-201ENST00000057513 IGKV2D-28P01615 120 aa9.78□□□□□ -0.84
TNIP3-201ENST00000057513 Q6JHZ5 121 aa9.78□□□□□ -0.84
TNIP3-201ENST00000057513 UPK3BQ9BT76 320 aa9.78□□□□□ -0.84
TNIP3-201ENST00000057513 TMEM258P61165 79 aa9.77□□□□□ -0.84
TNIP3-201ENST00000057513 Q96MF0 132 aa9.77□□□□□ -0.84
TNIP3-201ENST00000057513 LINC01561Q8N1V8 128 aa9.77□□□□□ -0.85
TNIP3-201ENST00000057513 SMIM11BQ8TCY0 68 aa9.77□□□□□ -0.85
TNIP3-201ENST00000057513 MIR7-3HGQ8N6C7 128 aa9.76□□□□□ -0.85
TNIP3-201ENST00000057513 OBSCN-AS1Q96MR7 158 aa9.76□□□□□ -0.85
TNIP3-201ENST00000057513 DSCR8Q96T75 97 aa9.76□□□□□ -0.85
TNIP3-201ENST00000057513 OVOL2Q9BRP0 275 aa9.76□□□□□ -0.85
TNIP3-201ENST00000057513 SND1-IT1Q9HBX3 110 aa9.76□□□□□ -0.85
TNIP3-201ENST00000057513 IGF2RP11717 2491 aa9.75□□□□□ -0.85
TNIP3-201ENST00000057513 TMEM89A2RUT3 159 aa9.75□□□□□ -0.85
TNIP3-201ENST00000057513 OXTP01178 125 aa9.75□□□□□ -0.85
TNIP3-201ENST00000057513 C2CD3Q4AC94 2353 aa9.75□□□□□ -0.85
TNIP3-201ENST00000057513 USP17L23D6RBM5 183 aa9.75□□□□□ -0.85
TNIP3-201ENST00000057513 NTM-AS1Q6ZSK4 140 aa9.75□□□□□ -0.85
TNIP3-201ENST00000057513 A8MTW9 85 aa9.74□□□□□ -0.85
TNIP3-201ENST00000057513 NCR3O14931 201 aa9.74□□□□□ -0.85
TNIP3-201ENST00000057513 CDC42SE2Q9NRR3 84 aa9.74□□□□□ -0.85
TNIP3-201ENST00000057513 CELSR2Q9HCU4 2923 aa9.74□□□□□ -0.85
TNIP3-201ENST00000057513 CSMD2Q7Z408 3487 aa9.73□□□□□ -0.85
TNIP3-201ENST00000057513 LECT2O14960 151 aa9.73□□□□□ -0.85
TNIP3-201ENST00000057513 AVPP01185 164 aa9.73□□□□□ -0.85
TNIP3-201ENST00000057513 IGHV4-59P01825 116 aa9.73□□□□□ -0.85
TNIP3-201ENST00000057513 SPG11Q96JI7 2443 aa9.72□□□□□ -0.85
TNIP3-201ENST00000057513 H0YGX0 51 aa9.72□□□□□ -0.85
TNIP3-201ENST00000057513 SLPIP03973 132 aa9.72□□□□□ -0.85
TNIP3-201ENST00000057513 TOMM7Q9P0U1 55 aa9.71□□□□□ -0.85
TNIP3-201ENST00000057513 LINC00158P58513 81 aa9.71□□□□□ -0.86
TNIP3-201ENST00000057513 COX7B2Q8TF08 81 aa9.71□□□□□ -0.86
TNIP3-201ENST00000057513 CCL18P55774 89 aa9.7□□□□□ -0.86
TNIP3-201ENST00000057513 RPL36AP83881 106 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms