RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 RBX1P62877 108 aa7.59□□□□□ -1.19
NIPAL3-201ENST00000003912 MRGPRG-AS1Q2M3A8 158 aa7.59□□□□□ -1.19
NIPAL3-201ENST00000003912 ZNF462Q96JM2 2506 aa7.59□□□□□ -1.19
NIPAL3-201ENST00000003912 IGLV4-3A0A075B6K6 122 aa7.59□□□□□ -1.19
NIPAL3-201ENST00000003912 H3BMG7 143 aa7.59□□□□□ -1.19
NIPAL3-201ENST00000003912 TRBV27A0A0K0K1C4 114 aa7.59□□□□□ -1.19
NIPAL3-201ENST00000003912 ETDBQ3ZM63 59 aa7.59□□□□□ -1.19
NIPAL3-201ENST00000003912 Q8N976 141 aa7.59□□□□□ -1.19
NIPAL3-201ENST00000003912 CLUHP3Q96NS8 147 aa7.58□□□□□ -1.2
NIPAL3-201ENST00000003912 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.58□□□□□ -1.2
NIPAL3-201ENST00000003912 M0R2N4 97 aa7.58□□□□□ -1.2
NIPAL3-201ENST00000003912 SYCNQ0VAF6 134 aa7.58□□□□□ -1.2
NIPAL3-201ENST00000003912 K7EP13 123 aa7.58□□□□□ -1.2
NIPAL3-201ENST00000003912 SPATA12Q7Z6I5 190 aa7.58□□□□□ -1.2
NIPAL3-201ENST00000003912 CDKN2A-AS1Q9UH64 79 aa7.58□□□□□ -1.2
NIPAL3-201ENST00000003912 NDUFB1O75438 58 aa7.58□□□□□ -1.2
NIPAL3-201ENST00000003912 EDN2P20800 178 aa7.58□□□□□ -1.2
NIPAL3-201ENST00000003912 COX7BP24311 80 aa7.58□□□□□ -1.2
NIPAL3-201ENST00000003912 C7orf33Q8WU49 177 aa7.57□□□□□ -1.2
NIPAL3-201ENST00000003912 RNF185Q96GF1 192 aa7.57□□□□□ -1.2
NIPAL3-201ENST00000003912 ATG2AQ2TAZ0 1938 aa7.57□□□□□ -1.2
NIPAL3-201ENST00000003912 NDUFS5O43920 106 aa7.57□□□□□ -1.2
NIPAL3-201ENST00000003912 C11orf21Q9P2W6 132 aa7.57□□□□□ -1.2
NIPAL3-201ENST00000003912 PYGO1Q9Y3Y4 419 aa7.57□□□□□ -1.2
NIPAL3-201ENST00000003912 ZFYVE26Q68DK2 2539 aa7.57□□□□□ -1.2
NIPAL3-201ENST00000003912 NTN5Q8WTR8 489 aaPredicted RBP7.57□□□□□ -1.2
NIPAL3-201ENST00000003912 TTTY13Q9BZ97 58 aa7.57□□□□□ -1.2
NIPAL3-201ENST00000003912 A0A087WZ39 114 aa7.56□□□□□ -1.2
NIPAL3-201ENST00000003912 C9orf153Q5TBE3 101 aa7.56□□□□□ -1.2
NIPAL3-201ENST00000003912 U3KQK5 164 aa7.56□□□□□ -1.2
NIPAL3-201ENST00000003912 ABCA12Q86UK0 2595 aa7.56□□□□□ -1.2
NIPAL3-201ENST00000003912 CD164L2Q6UWJ8 174 aa7.56□□□□□ -1.2
NIPAL3-201ENST00000003912 SPANXCQ9NY87 97 aa7.56□□□□□ -1.2
NIPAL3-201ENST00000003912 Q8N2B8 174 aa7.56□□□□□ -1.2
NIPAL3-201ENST00000003912 LOC100131303A0A0U1RQF7 123 aa7.56□□□□□ -1.2
NIPAL3-201ENST00000003912 RETNQ9HD89 108 aa7.56□□□□□ -1.2
NIPAL3-201ENST00000003912 HCFC1P51610 2035 aa7.56□□□□□ -1.2
NIPAL3-201ENST00000003912 MRPS12O15235 138 aaKnown RBP7.55□□□□□ -1.2
NIPAL3-201ENST00000003912 SPANXDQ9BXN6 97 aa7.55□□□□□ -1.2
NIPAL3-201ENST00000003912 IBA57-AS1B1ANH7 110 aa7.55□□□□□ -1.2
NIPAL3-201ENST00000003912 LECT2O14960 151 aa7.55□□□□□ -1.2
NIPAL3-201ENST00000003912 TRACP01848 142 aa7.55□□□□□ -1.2
NIPAL3-201ENST00000003912 PRM2P04554 102 aa7.55□□□□□ -1.2
NIPAL3-201ENST00000003912 HIGD2AQ9BW72 106 aa7.55□□□□□ -1.2
NIPAL3-201ENST00000003912 EXPH5Q8NEV8 1989 aa7.55□□□□□ -1.2
NIPAL3-201ENST00000003912 A0A0J9YXY3 114 aa7.54□□□□□ -1.2
NIPAL3-201ENST00000003912 ZNF22P17026 224 aaPredicted RBP7.54□□□□□ -1.2
NIPAL3-201ENST00000003912 TSHBP01222 138 aa7.54□□□□□ -1.2
NIPAL3-201ENST00000003912 NHLRC4P0CG21 123 aaPredicted RBP7.54□□□□□ -1.2
NIPAL3-201ENST00000003912 JMJD7-PLA2G4BH0Y9G9 81 aa7.54□□□□□ -1.2
NIPAL3-201ENST00000003912 UBE2D3P61077 147 aa7.54□□□□□ -1.2
NIPAL3-201ENST00000003912 UBE2D2P62837 147 aa7.54□□□□□ -1.2
NIPAL3-201ENST00000003912 USP9XQ93008 2570 aaPredicted RBP7.53□□□□□ -1.2
NIPAL3-201ENST00000003912 TMEM223A0PJW6 202 aa7.53□□□□□ -1.2
NIPAL3-201ENST00000003912 FAM19A1Q7Z5A9 133 aa7.53□□□□□ -1.2
NIPAL3-201ENST00000003912 ANKRD29Q8N6D5 301 aa7.53□□□□□ -1.2
NIPAL3-201ENST00000003912 FXYD2P54710 66 aa7.53□□□□□ -1.2
NIPAL3-201ENST00000003912 TNRC6BQ9UPQ9 1833 aaKnown RBP7.52□□□□□ -1.2
NIPAL3-201ENST00000003912 FAM19A5Q7Z5A7 132 aaPredicted RBP7.52□□□□□ -1.21
NIPAL3-201ENST00000003912 CHCHD7Q9BUK0 85 aa7.52□□□□□ -1.21
NIPAL3-201ENST00000003912 IGLV4-69A0A075B6H9 119 aa7.52□□□□□ -1.21
NIPAL3-201ENST00000003912 ACYP1P07311 99 aa7.52□□□□□ -1.21
NIPAL3-201ENST00000003912 MRPS36P82909 103 aaKnown RBP7.52□□□□□ -1.21
NIPAL3-201ENST00000003912 RNASE8Q8TDE3 154 aaKnown RBP7.52□□□□□ -1.21
NIPAL3-201ENST00000003912 TANC2Q9HCD6 1990 aa7.52□□□□□ -1.21
NIPAL3-201ENST00000003912 LINC00959A0A1B0GUT2 108 aa7.52□□□□□ -1.21
NIPAL3-201ENST00000003912 NREPQ16612 68 aa7.52□□□□□ -1.21
NIPAL3-201ENST00000003912 NRACQ8N912 160 aa7.52□□□□□ -1.21
NIPAL3-201ENST00000003912 TMEM256-PLSCR3K7ERE1 68 aa7.51□□□□□ -1.21
NIPAL3-201ENST00000003912 LINC01620Q4KN68 170 aa7.51□□□□□ -1.21
NIPAL3-201ENST00000003912 C1orf158Q8N1D5 194 aa7.51□□□□□ -1.21
NIPAL3-201ENST00000003912 LRCOL1A6NCL2 159 aa7.51□□□□□ -1.21
NIPAL3-201ENST00000003912 POLR2KP53803 58 aaKnown RBP7.51□□□□□ -1.21
NIPAL3-201ENST00000003912 TLN2Q9Y4G6 2542 aa7.51□□□□□ -1.21
NIPAL3-201ENST00000003912 UBE2D4Q9Y2X8 147 aa7.51□□□□□ -1.21
NIPAL3-201ENST00000003912 CNFNQ9BYD5 112 aa7.51□□□□□ -1.21
NIPAL3-201ENST00000003912 FASNP49327 2511 aaKnown RBP7.5□□□□□ -1.21
NIPAL3-201ENST00000003912 XAGE1AQ9HD64 81 aa7.5□□□□□ -1.21
NIPAL3-201ENST00000003912 Q6ZTC4 211 aa7.5□□□□□ -1.21
NIPAL3-201ENST00000003912 LRRK2Q5S007 2527 aa7.5□□□□□ -1.21
NIPAL3-201ENST00000003912 LOC107984640A0A0U1RRK4 108 aa7.5□□□□□ -1.21
NIPAL3-201ENST00000003912 RBM3P98179 157 aaKnown RBP7.5□□□□□ -1.21
NIPAL3-201ENST00000003912 LINC00474Q9P2X8 69 aa7.5□□□□□ -1.21
NIPAL3-201ENST00000003912 SPANXB1Q9NS25 103 aaPredicted RBP7.5□□□□□ -1.21
NIPAL3-201ENST00000003912 PDE6GP18545 87 aa7.49□□□□□ -1.21
NIPAL3-201ENST00000003912 GOLGB1Q14789 3259 aaKnown RBP7.48□□□□□ -1.21
NIPAL3-201ENST00000003912 PTPRBP23467 1997 aa7.48□□□□□ -1.21
NIPAL3-201ENST00000003912 CENPFP49454 3210 aa7.48□□□□□ -1.21
NIPAL3-201ENST00000003912 USP9YO00507 2555 aaPredicted RBP7.48□□□□□ -1.21
NIPAL3-201ENST00000003912 A0A0B4J2C4 111 aa7.48□□□□□ -1.21
NIPAL3-201ENST00000003912 G3V4G9 280 aa7.48□□□□□ -1.21
NIPAL3-201ENST00000003912 CLEC2BQ92478 149 aa7.48□□□□□ -1.21
NIPAL3-201ENST00000003912 SS18L2Q9UHA2 77 aa7.47□□□□□ -1.21
NIPAL3-201ENST00000003912 LINC00308Q8TCZ7 52 aa7.47□□□□□ -1.21
NIPAL3-201ENST00000003912 CDC42SE2Q9NRR3 84 aa7.47□□□□□ -1.21
NIPAL3-201ENST00000003912 H3BT86 120 aa7.46□□□□□ -1.21
NIPAL3-201ENST00000003912 FHL2Q14192 279 aa7.46□□□□□ -1.21
NIPAL3-201ENST00000003912 TRBV10-2A0A0K0K1G8 114 aa7.46□□□□□ -1.21
NIPAL3-201ENST00000003912 KRTAP24-1Q3LI83 254 aa7.46□□□□□ -1.22
NIPAL3-201ENST00000003912 PKD1L2Q7Z442 2459 aa7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 122.6 ms