RNA–Protein interactions for RNA: ENSMUST00000055758.15

Ubr3-201, Transcript of E3 ubiquitin-protein ligase UBR3, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ubr3, Length 8,072 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr3-201ENSMUST00000055758 Trav7-4A0A075B6C1 113 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Ighv8-9A0A0G2JET1 119 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 H2-Ab1P01921 265 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Hist1h2bmP10854 126 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Trav7d-4Q5R1H9 113 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Hist1h2bhQ64478 126 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Hist2h2bbQ64525 126 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Hist1h2bcQ6ZWY9 126 aaKnown RBP13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 GgactQ923B0 149 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Fblim1Q71FD7 375 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Gm29423A0A087WRM1 55 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 PkigO70139 76 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Olfr1419Q7TQS2 343 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Sdf2l1Q9ESP1 221 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Zfp976E9Q981 636 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Zfpl1Q9DB43 310 aa13.3□□□□□ -0.28
Ubr3-201ENSMUST00000055758 CtsgP28293 261 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Nat8b-psE0CYC6 232 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Lyl1P27792 278 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 MymxQ2Q5T5 84 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 ChtopQ9CY57 249 aaKnown RBP13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 EppinQ9DA01 134 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Ighv1-67A0A0G2JFN9 117 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 A930017K11RikE0CXQ2 571 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Slc35e4Q8K3D6 351 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Igkv4-58A0A0G2JGI6 119 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Xcl1P47993 114 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 P01680 129 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Znf691Q3TDE8 283 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Klk1b27Q9JM71 263 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Il9P15247 144 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 B230307C23RikQ8BLB2 64 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Igkv4-72A0A0B4J1I4 117 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Olfr1369-ps1A0A140T8K7 317 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Cisd3B1AR13 137 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Rpl23P62830 140 aaKnown RBP13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Pex7P97865 318 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Gm10604Q3V0X7 143 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Slc25a35Q5SWT3 300 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Il12rb1Q60837 738 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Olfr263Q7TQT8 317 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Snx22Q8C084 192 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Gm10283Q8C3L5 117 aa13.29□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Sh2d1bO35324 132 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Lcn2P11672 200 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Tanc1Q0VGY8 1856 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 St6galnac2P70277 373 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Wdr31Q9JHB4 367 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Nup210lQ9D2F7 1881 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 RflnaQ7TS73 204 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Ccl2P10148 148 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Psg22Q810J1 475 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Tnrc6cQ3UHC0 1690 aaKnown RBP13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Brwd3A2AHJ4 1799 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Prr19B2RW88 366 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Spink1P09036 80 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Ube2zQ3UE37 356 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Foxg1Q60987 481 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 H2afb1Q9CQ70 111 aa13.28□□□□□ -0.28
Ubr3-201ENSMUST00000055758 P01746 140 aa13.27□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Gm10799F7C7U2 104 aa13.27□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Gata1P17679 413 aa13.27□□□□□ -0.28
Ubr3-201ENSMUST00000055758 MavsQ8VCF0 503 aa13.27□□□□□ -0.28
Ubr3-201ENSMUST00000055758 AcacaQ5SWU9 2345 aa13.27□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Ucp2P70406 309 aa13.27□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Znf474Q6V5K9 347 aa13.27□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Q9DAS2 200 aa13.27□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Vmn1r54Q9EPB8 315 aa13.27□□□□□ -0.28
Ubr3-201ENSMUST00000055758 Srsf1Q6PDM2 248 aaKnown RBP13.27□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Lamtor2Q9JHS3 125 aa13.27□□□□□ -0.29
Ubr3-201ENSMUST00000055758 PappaQ8R4K8 1624 aa13.27□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Nhlrc4Q3UP44 136 aa13.27□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Nkain3Q3URJ8 181 aa13.27□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Mllt11P97783 90 aa13.27□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Spink8Q09TK9 105 aa13.27□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Gm2381G3UY53 305 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Faap20Q3UN58 186 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 LgalslbQ7TPX9 165 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Pf4Q9Z126 105 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Smim19Q80ZU4 107 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Chac1Q8R3J5 223 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Cela3bQ9CQ52 269 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Ighv1-54A0A075B5W5 117 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Trbv15A0A0A6YYE3 115 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 P01679 107 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Trav7d-3Q5R1I1 112 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Cacna1gQ5SUF7 2381 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Awat1A2ADU9 328 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Zdbf2Q5SS00 2493 aaKnown RBP13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Gata2O09100 480 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Mrpl23O35972 146 aaKnown RBP13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 P01759 136 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Foxa2P35583 459 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Tspan2Q922J6 221 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Prss30Q9QYZ9 310 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Psg18B2RSG7 476 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Gm20458E9PXJ7 78 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 C2cd4dP0CG09 341 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Hist1h2bfP10853 126 aa13.26□□□□□ -0.29
Ubr3-201ENSMUST00000055758 Hist1h2bbQ64475 126 aa13.26□□□□□ -0.29
Retrieved 100 of 22,080 RNA–protein pairs in 33.4 ms