RNA–Protein interactions for RNA: ENSMUST00000026740.5

Col7a1-201, Transcript of Collagen alpha-1(VII) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col7a1, Length 9,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col7a1-201ENSMUST00000026740 Mbnl2Q8C181 373 aaKnown RBP12.21□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Cd99Q8VCN6 175 aa12.21□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Gm7489Q3UT34 171 aa12.21□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Cxcl2P10889 100 aa12.21□□□□□ -0.46
Col7a1-201ENSMUST00000026740 H2-M10.4Q85ZW8 331 aa12.21□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Igkv12-38A0A0G2JEI7 115 aa12.2□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Irf2bp2E9Q1P8 570 aa12.2□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Pax8Q00288 457 aa12.2□□□□□ -0.46
Col7a1-201ENSMUST00000026740 DscamQ9ERC8 2013 aa12.2□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Gng7Q61016 68 aa12.2□□□□□ -0.46
Col7a1-201ENSMUST00000026740 GgactQ923B0 149 aa12.2□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Olfr223Q8VF69 319 aa12.2□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Gm17334Q8C6U3 126 aa12.2□□□□□ -0.46
Col7a1-201ENSMUST00000026740 QrfpQ8CE23 124 aa12.2□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Mrps36Q9CQX8 102 aa12.2□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Mrpl55Q9CZ83 127 aa12.2□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Vgll1Q99NC0 307 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Cox6b1P56391 86 aaKnown RBP12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Rnf115Q9D0C1 305 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Dcbld1Q9D4J3 503 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 St6galnac6Q9JM95 333 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Trbv1A0A0B4J1G7 116 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Q8CF25 301 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Sdr39u1Q5M8N4 308 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Igkv4-50A0A0B4J1J0 117 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Gm14548E9Q1Z6 680 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 OstcQ78XF5 149 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Nit2Q9JHW2 276 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 VwceQ3U515 929 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Loxl4Q924C6 757 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 ChodlQ9CXM0 273 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Pradc1Q9D9N8 188 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Defb5Q9EPV9 64 aa12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Hspe1Q64433 102 aaKnown RBP12.19□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Loxl2P58022 776 aa12.18□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Ntn3Q9R1A3 580 aa12.18□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Cela1Q91X79 266 aa12.18□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Spint5J3KMK8 105 aa12.18□□□□□ -0.46
Col7a1-201ENSMUST00000026740 LtaP09225 202 aa12.18□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Zfp959Q91VM8 539 aa12.18□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Gm11444F6QMA6 170 aa12.18□□□□□ -0.46
Col7a1-201ENSMUST00000026740 OpalinQ7M750 143 aa12.18□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Dkk2Q9QYZ8 259 aa12.18□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Tcf20Q9EPQ8 1987 aa12.18□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Nupr1Q9WTK0 80 aa12.18□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Tff1Q08423 87 aa12.18□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Lrrc26Q91W20 331 aa12.18□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Gm10799F7C7U2 104 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Pla2g2fQ9QZT4 168 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 E430018J23RikE9PZQ8 461 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Ntn1O09118 604 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 TtrP07309 147 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Klf14Q19A41 325 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Ankrd55Q8BLD6 626 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Dnase2P56542 353 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Gm10447Q3UQ92 135 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 EtdQ80SW5 59 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Iba57Q8CAK1 358 aaKnown RBP12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Tcrg-V5A0A0G2JGV5 113 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 SbpP15501 199 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Mrpl27Q99N92 148 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Rnf125Q9D9R0 233 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Hs3st3b1Q9QZS6 390 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Trav6-1A0A075B5Z8 112 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Ifitm7G3X9Z2 141 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Ccl2P10148 148 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Spred3Q6P6N5 408 aa12.17□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Rnf5O35445 180 aa12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 MpzP27573 248 aa12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Klk4Q9Z0M1 255 aa12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Gm42957D6RFQ2 366 aa12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Spint3Q3UW09 88 aa12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Nrn1Q8CFV4 142 aa12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Ca2P00920 260 aaKnown RBP12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 P01667 111 aa12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Igf2rQ07113 2483 aaKnown RBP12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Ighv6-4A0A0A6YX19 119 aa12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Klk1b27Q9JM71 263 aa12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 P01726 129 aa12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Foxa3P35584 353 aa12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Pxt1Q8K459 51 aa12.16□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Igfbp3P47878 292 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Ypel2Q65Z95 119 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 CenpvQ9CXS4 252 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Ypel1Q9ESC7 118 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Fam89bQ9QUI1 189 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Olfr779E9PUS9 130 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Csf2rb2P26954 878 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Tusc5Q8C838 173 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Rnase2aQ8K196 155 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Rnase6Q9D244 153 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 AgmatA2AS89 358 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 HrkP62816 92 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Klf13Q9JJZ6 289 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Plxna4Q80UG2 1893 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Tmem86bQ497J1 226 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Foxg1Q60987 481 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Frrs1lB1AXV0 293 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Egr1P08046 533 aa12.15□□□□□ -0.46
Col7a1-201ENSMUST00000026740 Igkv10-95A0A0G2JFY3 115 aa12.15□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 86.8 ms