RNA–Protein interactions for RNA: ENSMUST00000005841.15

Ctcf-201, Transcript of Transcriptional repressor CTCF, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctcf, Length 3,782 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctcf-201ENSMUST00000005841 RprmlQ3URD2 117 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Prdx2Q61171 198 aaKnown RBP13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr996Q7TRA0 314 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Ercc8Q8CFD5 397 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr736Q8VFT6 312 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Pip4p2Q9CZX7 257 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Ccl28Q9JIL2 130 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Gm7173A0A0G2JEB6 3132 aa13.62□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Cr2P19070 1025 aa13.61□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Ankrd55Q8BLD6 626 aa13.61□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Fam110aQ8R184 296 aa13.61□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr123Q8VFQ1 309 aa13.61□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Trav4-4-dv10A0A075B651 110 aa13.61□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Ighv5-12-4A0A0A6YWG4 117 aa13.61□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Agr2O88312 175 aa13.61□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr1380Q7TQT5 311 aa13.61□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr25Q7TRD6 313 aa13.61□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Mrpl20Q9CQL4 149 aa13.61□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Q8BTG6 205 aa13.61□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Tmem126aQ9D8Y1 196 aa13.61□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Gng12Q9DAS9 72 aa13.61□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Igkv1-132A0A0B4J1H9 120 aa13.6□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Gm6871L7N248 545 aa13.6□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Tnfsf12O54907 249 aa13.6□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr1367Q8VFG2 316 aa13.6□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Gm10309Q8C648 119 aa13.6□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Otx2P80206 289 aa13.6□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Fam222bQ6P539 562 aa13.6□□□□□ -0.23
Ctcf-201ENSMUST00000005841 H2-M10.4Q85ZW8 331 aa13.6□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Gm12689Q8BQU9 117 aa13.6□□□□□ -0.23
Ctcf-201ENSMUST00000005841 CdiptQ8VDP6 213 aa13.6□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Zfp950A0A0U1RQ46 609 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Gm19345G3UYD9 124 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Wt1P22561 449 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Icam2P35330 277 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Atp6v0cP63082 155 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 AY761185Q5ERI8 94 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr745Q7TRL9 328 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Tmem177Q8BPE4 311 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Wdfy4E9Q2M9 3149 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Igkv6-15A0A140T8M5 115 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Clpsl2Q3UW21 102 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Q497N7 227 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Slc36a4Q8CH36 500 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 PpdpfQ9CR37 115 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 BptfA2A654 3036 aaKnown RBP13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Igkv14-130A0A0G2JF45 117 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Cst7O89098 144 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Ccl5P30882 91 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Taar9Q5QD04 348 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr1443Q8VFW8 312 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Olfr1271Q8VG62 305 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 4933414I15RikQ9D4D5 133 aa13.59□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Rps21Q9CQR2 83 aaKnown RBP13.58□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Ppp1r27Q9D119 154 aa13.58□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Q9D727 114 aa13.58□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Tex48Q9DA81 110 aa13.58□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Mmp17Q9R0S3 578 aa13.58□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Nat6Q9R123 314 aa13.58□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Ramp3Q9WUP1 147 aa13.58□□□□□ -0.23
Ctcf-201ENSMUST00000005841 Gm1968Q3T9I3 115 aa13.58□□□□□ -0.24
Ctcf-201ENSMUST00000005841 4930474N05RikQ8BVR5 218 aa13.58□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Q8VC23 124 aa13.58□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Ints1Q6P4S8 2195 aa13.58□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Tmem238A9JSM3 176 aa13.58□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Ren2P00796 401 aa13.58□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Cd200r3Q5UKY4 296 aa13.58□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Olfr153Q7TR48 307 aa13.58□□□□□ -0.24
Ctcf-201ENSMUST00000005841 RnasekQ8K3C0 98 aa13.58□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Trib1Q8K4K4 372 aa13.58□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Vmn1r237Q8R296 289 aa13.58□□□□□ -0.24
Ctcf-201ENSMUST00000005841 P01792 123 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Adam8Q05910 826 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Defb25Q30KN8 71 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Olfr433Q7TRV9 314 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 1700001C19RikQ8K168 210 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Pxt1Q8K459 51 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Golt1bQ9CR60 138 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 A630023A22RikJ3QP60 199 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 SrstQ06666 185 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Sox21Q811W0 276 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Chchd5Q9CQP3 110 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 UrahQ9CRB3 118 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 LbhQ9CX60 105 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 StumQ0VBF8 141 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Olfr149Q60888 311 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Nup37Q9CWU9 326 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Fam213bQ9DB60 201 aa13.57□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Trbv19A0A0B4J1H4 117 aa13.56□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Gm15080A2BI02 449 aa13.56□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Gm15093A2BI72 449 aa13.56□□□□□ -0.24
Ctcf-201ENSMUST00000005841 P18530 117 aa13.56□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Tnfrsf9P20334 256 aa13.56□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Gm15085Q62012 449 aa13.56□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Pdcd1lg2Q9WUL5 247 aa13.56□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Gm45521A0A1B0GRK0 198 aa13.56□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Olfr748E9Q9Z0 307 aa13.56□□□□□ -0.24
Ctcf-201ENSMUST00000005841 P04943 107 aa13.56□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Gm5464Q3UY29 175 aa13.56□□□□□ -0.24
Ctcf-201ENSMUST00000005841 Col13a1Q9R1N9 751 aa13.56□□□□□ -0.24
Retrieved 100 of 22,080 RNA–protein pairs in 37 ms