RNA–Protein interactions for RNA: YDL150W

RPC53, Transcript of RNA polymerase III subunit C53, yeast

Gene RPC53, Length 1,269 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPC53	YDL150W	YMR210W	Q03649	449 aa		5.3	□□□□□ -1.56
RPC53	YDL150W	RPP0	P05317	312 aa	Known RBP	5.29	□□□□□ -1.56
RPC53	YDL150W	YPT7	P32939	208 aa		5.29	□□□□□ -1.56
RPC53	YDL150W	VPS27	P40343	622 aa	Known RBP	5.29	□□□□□ -1.56
RPC53	YDL150W	RNR4	P49723	345 aa	Known RBP	5.29	□□□□□ -1.56
RPC53	YDL150W	SKY1	Q03656	742 aa		5.29	□□□□□ -1.56
RPC53	YDL150W	MRI1	Q06489	411 aa	Known RBP	5.29	□□□□□ -1.56
RPC53	YDL150W	DIA2	Q08496	732 aa	Predicted RBP	5.29	□□□□□ -1.56
RPC53	YDL150W	BMS1	Q08965	1183 aa	Known RBP	5.29	□□□□□ -1.56
RPC53	YDL150W	RPS21B	Q3E754	87 aa	Known RBP	5.29	□□□□□ -1.56
RPC53	YDL150W	ECM3	Q99252	613 aa		5.29	□□□□□ -1.56
RPC53	YDL150W	SUI2	P20459	304 aa	Known RBP	5.28	□□□□□ -1.56
RPC53	YDL150W	KCC4	P25389	1037 aa		5.28	□□□□□ -1.56
RPC53	YDL150W	PRS1	P32895	427 aa	Known RBP	5.28	□□□□□ -1.56
RPC53	YDL150W	SER1	P33330	395 aa	Known RBP	5.28	□□□□□ -1.56
RPC53	YDL150W	PIG2	P40187	538 aa		5.28	□□□□□ -1.56
RPC53	YDL150W	YIL089W	P40500	205 aa		5.28	□□□□□ -1.56
RPC53	YDL150W	ENP2	P48234	707 aa	Known RBP	5.28	□□□□□ -1.56
RPC53	YDL150W	MDG1	P53885	366 aa		5.28	□□□□□ -1.56
RPC53	YDL150W	RMT2	Q03305	412 aa		5.28	□□□□□ -1.56
RPC53	YDL150W	YLR407W	Q06070	228 aa		5.28	□□□□□ -1.56
RPC53	YDL150W	RTT109	Q07794	436 aa		5.28	□□□□□ -1.56
RPC53	YDL150W	CDC45	Q08032	650 aa		5.28	□□□□□ -1.56
RPC53	YDL150W	YPR027C	Q12079	277 aa		5.28	□□□□□ -1.56
RPC53	YDL150W	TMA7	Q3E764	64 aa	Known RBP	5.28	□□□□□ -1.56
RPC53	YDL150W	RPS21A	P0C0V8	87 aa	Known RBP	5.27	□□□□□ -1.57
RPC53	YDL150W	KAR1	P11927	433 aa		5.27	□□□□□ -1.57
RPC53	YDL150W	MSM1	P22438	575 aa		5.27	□□□□□ -1.57
RPC53	YDL150W	IMG2	P25642	146 aa	Predicted RBP	5.27	□□□□□ -1.57
RPC53	YDL150W	PET127	P32606	800 aa		5.27	□□□□□ -1.57
RPC53	YDL150W	YNL195C	P40168	261 aa		5.27	□□□□□ -1.57
RPC53	YDL150W	SLD3	P53135	668 aa		5.27	□□□□□ -1.57
RPC53	YDL150W	SPC105	P53148	917 aa		5.27	□□□□□ -1.57
RPC53	YDL150W	PEX8	P53248	589 aa		5.27	□□□□□ -1.57
RPC53	YDL150W	YGR151C	P53287	111 aa		5.27	□□□□□ -1.57
RPC53	YDL150W	NOP15	P53927	220 aa	Predicted RBP	5.27	□□□□□ -1.57
RPC53	YDL150W	YNL050C	P53952	270 aa		5.27	□□□□□ -1.57
RPC53	YDL150W	DIB1	Q06819	143 aa	Predicted RBP	5.27	□□□□□ -1.57
RPC53	YDL150W	ISA1	Q07821	250 aa	Predicted RBP	5.27	□□□□□ -1.57
RPC53	YDL150W	VHS3	Q08438	674 aa		5.27	□□□□□ -1.57
RPC53	YDL150W	CHS5	Q12114	671 aa	Known RBP	5.27	□□□□□ -1.57
RPC53	YDL150W	GRX6	Q12438	231 aa		5.27	□□□□□ -1.57
RPC53	YDL150W	ERG20	P08524	352 aa	Known RBP	5.26	□□□□□ -1.57
RPC53	YDL150W	ABF1	P14164	731 aa		5.26	□□□□□ -1.57
RPC53	YDL150W	VPS34	P22543	875 aa		5.26	□□□□□ -1.57
RPC53	YDL150W	PLC1	P32383	869 aa		5.26	□□□□□ -1.57
RPC53	YDL150W	YFR016C	P43597	1233 aa	Known RBP	5.26	□□□□□ -1.57
RPC53	YDL150W	COX18	P53239	316 aa		5.26	□□□□□ -1.57
RPC53	YDL150W	HEF3	P53978	1044 aa	Known RBP	5.26	□□□□□ -1.57
RPC53	YDL150W	ALE1	Q08548	619 aa		5.26	□□□□□ -1.57
RPC53	YDL150W	AFT2	Q08957	416 aa		5.26	□□□□□ -1.57
RPC53	YDL150W	RPS17A	P02407	136 aa	Known RBP	5.25	□□□□□ -1.57
RPC53	YDL150W	RPS17B	P14127	136 aa	Known RBP	5.25	□□□□□ -1.57
RPC53	YDL150W	FRS1	P15624	595 aa	Known RBP	5.25	□□□□□ -1.57
RPC53	YDL150W	TFC4	P33339	1025 aa		5.25	□□□□□ -1.57
RPC53	YDL150W	YMC2	P38087	329 aa		5.25	□□□□□ -1.57
RPC53	YDL150W	MIT1	P40002	666 aa		5.25	□□□□□ -1.57
RPC53	YDL150W	MAM1	P40065	302 aa		5.25	□□□□□ -1.57
RPC53	YDL150W	PEA2	P40091	420 aa		5.25	□□□□□ -1.57
RPC53	YDL150W	YGL082W	P53155	381 aa		5.25	□□□□□ -1.57
RPC53	YDL150W	PPN1	Q04119	674 aa		5.25	□□□□□ -1.57
RPC53	YDL150W	PEX15	Q08215	383 aa		5.25	□□□□□ -1.57
RPC53	YDL150W	OSW1	Q08692	278 aa		5.25	□□□□□ -1.57
RPC53	YDL150W	NOP56	Q12460	504 aa	Known RBP RIP-Chip data	5.25	□□□□□ -1.57	not detected
RPC53	YDL150W	RVB2	Q12464	471 aa	Known RBP	5.25	□□□□□ -1.57
RPC53	YDL150W	COX11	P19516	300 aa	Known RBP	5.24	□□□□□ -1.57
RPC53	YDL150W	FEN2	P25621	512 aa	Known RBP	5.24	□□□□□ -1.57
RPC53	YDL150W	DAL3	P32459	195 aa		5.24	□□□□□ -1.57
RPC53	YDL150W	ORC2	P32833	620 aa		5.24	□□□□□ -1.57
RPC53	YDL150W	CTP1	P38152	299 aa		5.24	□□□□□ -1.57
RPC53	YDL150W	FAT1	P38225	669 aa		5.24	□□□□□ -1.57
RPC53	YDL150W	DUN1	P39009	513 aa		5.24	□□□□□ -1.57
RPC53	YDL150W	IES1	P43579	692 aa		5.24	□□□□□ -1.57
RPC53	YDL150W	TIM50	Q02776	476 aa		5.24	□□□□□ -1.57
RPC53	YDL150W	NSE5	Q03718	556 aa		5.24	□□□□□ -1.57
RPC53	YDL150W	VBA4	Q04602	768 aa	Known RBP	5.24	□□□□□ -1.57
RPC53	YDL150W	PHM6	Q05637	104 aa		5.24	□□□□□ -1.57
RPC53	YDL150W	YDL086W	Q07505	273 aa		5.24	□□□□□ -1.57
RPC53	YDL150W	LYS2	P07702	1392 aa		5.24	□□□□□ -1.57
RPC53	YDL150W	ACO1	P19414	778 aa	Known RBP RIP-Chip data	5.23	□□□□□ -1.57	not detected
RPC53	YDL150W	PRP22	P24384	1145 aa	Known RBP	5.23	□□□□□ -1.57
RPC53	YDL150W	HEM12	P32347	362 aa	Predicted RBP	5.23	□□□□□ -1.57
RPC53	YDL150W	MSS1	P32559	526 aa	Predicted RBP	5.23	□□□□□ -1.57
RPC53	YDL150W	KSP1	P38691	1029 aa	Known RBP	5.23	□□□□□ -1.57
RPC53	YDL150W	FUN12	P39730	1002 aa	Known RBP	5.23	□□□□□ -1.57
RPC53	YDL150W	VID28	P40547	921 aa		5.23	□□□□□ -1.57
RPC53	YDL150W	MPS3	P47069	682 aa		5.23	□□□□□ -1.57
RPC53	YDL150W	YJR008W	P47085	338 aa		5.23	□□□□□ -1.57
RPC53	YDL150W	POM34	Q12445	299 aa		5.23	□□□□□ -1.57
RPC53	YDL150W	GLN4	P13188	809 aa	Known RBP	5.22	□□□□□ -1.57
RPC53	YDL150W	HOM2	P13663	365 aa	Known RBP	5.22	□□□□□ -1.57
RPC53	YDL150W	KIN82	P25341	720 aa		5.22	□□□□□ -1.57
RPC53	YDL150W	YHR097C	P38809	366 aa	Known RBP	5.22	□□□□□ -1.57
RPC53	YDL150W	KHA1	P40309	873 aa		5.22	□□□□□ -1.57
RPC53	YDL150W	PXA1	P41909	870 aa		5.22	□□□□□ -1.57
RPC53	YDL150W	RFX1	P48743	811 aa		5.22	□□□□□ -1.57
RPC53	YDL150W	SND1	Q04007	877 aa		5.22	□□□□□ -1.57
RPC53	YDL150W	YPS7	Q06325	596 aa		5.22	□□□□□ -1.57
RPC53	YDL150W	YOL057W	Q08225	711 aa		5.22	□□□□□ -1.57
RPC53	YDL150W	SSP2	Q08646	371 aa		5.22	□□□□□ -1.57

Retrieved 100 of 5,963 RNA–protein pairs in 26.4 ms