RNA–Protein interactions for RNA: ENST00000641259.1

RBFOX1-224, Transcript of RNA binding fox-1 homolog 1, humanhuman

BASIC

Gene RBFOX1, Length 3,651 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-224ENST00000641259 GUCY2CP25092 1073 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 HSPA4P34932 840 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 GBP6Q6ZN66 633 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 C11orf57Q6ZUT1 292 aaPredicted RBP13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 ZNF589Q86UQ0 364 aaPredicted RBP13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 FBXO18Q8NFZ0 1043 aa13.61□□□□□ -0.23
RBFOX1-224ENST00000641259 IFIT5Q13325 482 aaKnown RBP13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 RNF187Q5TA31 235 aaPredicted RBP13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 DDX46Q7L014 1031 aaKnown RBP13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 SEPT12Q8IYM1 358 aa13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 FSD1Q9BTV5 496 aa13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 SCN7AQ01118 1682 aa13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 NOP2P46087 812 aaKnown RBP13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 LRRC2Q9BYS8 371 aa13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 BRWD3Q6RI45 1802 aa13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 PES1O00541 588 aaKnown RBP13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 NTSR2O95665 410 aa13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 SYCP1Q15431 976 aa13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 LZTFL1Q9NQ48 299 aa13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 RIPOR2Q9Y4F9 1068 aa13.6□□□□□ -0.23
RBFOX1-224ENST00000641259 ONECUT3O60422 494 aaPredicted RBP13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 LRCH2Q5VUJ6 765 aa13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 ZNF622Q969S3 477 aaKnown RBP eCLIP13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 HAUS7Q99871 368 aa13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 NAT10Q9H0A0 1025 aaKnown RBP13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 ACBD3Q9H3P7 528 aa13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 DDX19AQ9NUU7 478 aaKnown RBP13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 NIP7Q9Y221 180 aaKnown RBP eCLIP13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 BIRC2Q13490 618 aa13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 CCAR1Q8IX12 1150 aaKnown RBP13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 SEC62Q99442 399 aaKnown RBP13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 LAMB2P55268 1798 aa13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 TAF1P21675 1872 aa13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 SCARF1Q14162 830 aa13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 KIF4BQ2VIQ3 1234 aa13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 C3orf67Q6ZVT6 689 aa13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 SEC31BQ9NQW1 1179 aa13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 SRP68Q9UHB9 627 aaKnown RBP13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 SNX14Q9Y5W7 946 aa13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 TAF6LQ9Y6J9 622 aa13.59□□□□□ -0.23
RBFOX1-224ENST00000641259 PDE8AO60658 829 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 PEX19P40855 299 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 SF3A3Q12874 501 aaKnown RBP eCLIP13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 VGLL2Q8N8G2 317 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 PPP1R13BQ96KQ4 1090 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 MED23Q9ULK4 1368 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 NEMFO60524 1076 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 ERLIN2O94905 339 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 GPR108Q9NPR9 543 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 SNAP23O00161 211 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 FBXW10Q5XX13 1052 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 PI16Q6UXB8 463 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 CCDC129Q6ZRS4 1044 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 FSIP1Q8NA03 581 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 IL17RAQ96F46 866 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 SCAND2PQ9GZW5 306 aaPredicted RBP13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 SUGCTQ9HAC7 445 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 ORC3Q9UBD5 711 aaPredicted RBP13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 MTMR6Q9Y217 621 aa13.58□□□□□ -0.24
RBFOX1-224ENST00000641259 CNTNAP4Q9C0A0 1308 aa13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 C4AP0C0L4 1744 aa13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 C4BP0C0L5 1744 aa13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 FTOQ9C0B1 505 aaKnown RBP eCLIP13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 SH3TC1Q8TE82 1336 aa13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 N4BP1O75113 896 aaKnown RBP13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 KIAA0754O94854 1291 aa13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 TPM1P09493 284 aa13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 ADCK5Q3MIX3 580 aa13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 LDHAL6AQ6ZMR3 332 aa13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 XAGE2Q96GT9 111 aa13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 LRRC4BQ9NT99 713 aa13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 TRPC5Q9UL62 973 aaPredicted RBP13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 STX1AQ16623 288 aa13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 TBC1D9BQ66K14 1250 aa13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 DESI2Q9BSY9 194 aa13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 XPO4Q9C0E2 1151 aaKnown RBP13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 QTRT2Q9H974 415 aaKnown RBP13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 CCNL1Q9UK58 526 aaPredicted RBP13.57□□□□□ -0.24
RBFOX1-224ENST00000641259 ATP2B1P20020 1258 aa13.56□□□□□ -0.24
RBFOX1-224ENST00000641259 MAGEA9P43362 315 aa13.56□□□□□ -0.24
RBFOX1-224ENST00000641259 BICDL1Q6ZP65 573 aa13.56□□□□□ -0.24
RBFOX1-224ENST00000641259 RUFY3Q7L099 469 aa13.56□□□□□ -0.24
RBFOX1-224ENST00000641259 HELBQ8NG08 1087 aaPredicted RBP13.56□□□□□ -0.24
RBFOX1-224ENST00000641259 CEP126Q9P2H0 1117 aa13.56□□□□□ -0.24
RBFOX1-224ENST00000641259 ANKRD18BA2A2Z9 1011 aa13.56□□□□□ -0.24
RBFOX1-224ENST00000641259 ERLIN1O75477 346 aa13.56□□□□□ -0.24
RBFOX1-224ENST00000641259 CUL4AQ13619 759 aa13.56□□□□□ -0.24
RBFOX1-224ENST00000641259 KIRREL3Q8IZU9 778 aa13.56□□□□□ -0.24
RBFOX1-224ENST00000641259 PARD6BQ9BYG5 372 aa13.56□□□□□ -0.24
RBFOX1-224ENST00000641259 SNRKQ9NRH2 765 aa13.56□□□□□ -0.24
RBFOX1-224ENST00000641259 ANO10Q9NW15 660 aa13.56□□□□□ -0.24
RBFOX1-224ENST00000641259 GNPATO15228 680 aa13.55□□□□□ -0.24
RBFOX1-224ENST00000641259 PDCP20941 246 aa13.55□□□□□ -0.24
RBFOX1-224ENST00000641259 USP8P40818 1118 aa13.55□□□□□ -0.24
RBFOX1-224ENST00000641259 CCT5P48643 541 aa13.55□□□□□ -0.24
RBFOX1-224ENST00000641259 USPL1Q5W0Q7 1092 aa13.55□□□□□ -0.24
RBFOX1-224ENST00000641259 TMED8Q6PL24 325 aaPredicted RBP13.55□□□□□ -0.24
RBFOX1-224ENST00000641259 CNNM3Q8NE01 707 aa13.55□□□□□ -0.24
RBFOX1-224ENST00000641259 POLD4Q9HCU8 107 aa13.55□□□□□ -0.24
RBFOX1-224ENST00000641259 ANAPC15P60006 121 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms