RNA–Protein interactions for RNA: ENST00000641218.1

CASC19-218, Transcript of cancer susceptibility 19, humanhuman

Gene CASC19, Length 1,522 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC19-218ENST00000641218 SPTBN5Q9NRC6 3674 aaKnown RBP9.42□□□□□ -0.9
CASC19-218ENST00000641218 WNT10BO00744 389 aa9.41□□□□□ -0.9
CASC19-218ENST00000641218 LRIT3Q3SXY7 679 aa9.41□□□□□ -0.9
CASC19-218ENST00000641218 HSP90AB3PQ58FF7 597 aa9.41□□□□□ -0.9
CASC19-218ENST00000641218 PNISRQ8TF01 805 aaKnown RBP9.41□□□□□ -0.9
CASC19-218ENST00000641218 ZC3H12CQ9C0D7 883 aaKnown RBP9.41□□□□□ -0.9
CASC19-218ENST00000641218 PTCH2Q9Y6C5 1203 aa9.41□□□□□ -0.9
CASC19-218ENST00000641218 AXIN1O15169 862 aa9.41□□□□□ -0.9
CASC19-218ENST00000641218 PER1O15534 1290 aaPredicted RBP9.41□□□□□ -0.9
CASC19-218ENST00000641218 EIF4A1P60842 406 aaKnown RBP9.41□□□□□ -0.9
CASC19-218ENST00000641218 GPSM2P81274 684 aa9.41□□□□□ -0.9
CASC19-218ENST00000641218 SLC4A8Q2Y0W8 1093 aa9.41□□□□□ -0.9
CASC19-218ENST00000641218 BAP1Q92560 729 aa9.41□□□□□ -0.9
CASC19-218ENST00000641218 WNK4Q96J92 1243 aa9.41□□□□□ -0.9
CASC19-218ENST00000641218 PTPN18Q99952 460 aa9.41□□□□□ -0.9
CASC19-218ENST00000641218 MTMR10Q9NXD2 777 aa9.41□□□□□ -0.9
CASC19-218ENST00000641218 SH3TC1Q8TE82 1336 aa9.4□□□□□ -0.9
CASC19-218ENST00000641218 WTIPA6NIX2 430 aaPredicted RBP9.4□□□□□ -0.91
CASC19-218ENST00000641218 GJA8P48165 433 aa9.4□□□□□ -0.91
CASC19-218ENST00000641218 CSPP1Q1MSJ5 1256 aa9.4□□□□□ -0.91
CASC19-218ENST00000641218 NBPF9Q3BBW0 867 aa9.4□□□□□ -0.91
CASC19-218ENST00000641218 CELF1Q92879 486 aaKnown RBP9.4□□□□□ -0.91
CASC19-218ENST00000641218 HPS1Q92902 700 aa9.4□□□□□ -0.91
CASC19-218ENST00000641218 SLC10A4Q96EP9 437 aa9.4□□□□□ -0.91
CASC19-218ENST00000641218 GDF15Q99988 308 aa9.4□□□□□ -0.91
CASC19-218ENST00000641218 TTC28Q96AY4 2481 aa9.39□□□□□ -0.91
CASC19-218ENST00000641218 GJB1P08034 283 aa9.39□□□□□ -0.91
CASC19-218ENST00000641218 HCLS1P14317 486 aaPredicted RBP9.39□□□□□ -0.91
CASC19-218ENST00000641218 CLK2P49760 499 aaKnown RBP9.39□□□□□ -0.91
CASC19-218ENST00000641218 PRAMEF18Q5VWM3 479 aa9.39□□□□□ -0.91
CASC19-218ENST00000641218 APOBEC3FQ8IUX4 373 aaKnown RBP9.39□□□□□ -0.91
CASC19-218ENST00000641218 ZNF511Q8NB15 262 aa9.39□□□□□ -0.91
CASC19-218ENST00000641218 RTF1Q92541 710 aaKnown RBP9.39□□□□□ -0.91
CASC19-218ENST00000641218 DPF3Q92784 378 aa9.39□□□□□ -0.91
CASC19-218ENST00000641218 ZNF775Q96BV0 537 aaPredicted RBP9.39□□□□□ -0.91
CASC19-218ENST00000641218 ZCCHC17Q9NP64 241 aaKnown RBP9.39□□□□□ -0.91
CASC19-218ENST00000641218 PPP2R3BQ9Y5P8 575 aa9.39□□□□□ -0.91
CASC19-218ENST00000641218 MYO3BQ8WXR4 1341 aa9.39□□□□□ -0.91
CASC19-218ENST00000641218 USP17L3A6NCW0 530 aa9.38□□□□□ -0.91
CASC19-218ENST00000641218 USP17L4A6NCW7 530 aa9.38□□□□□ -0.91
CASC19-218ENST00000641218 VCANP13611 3396 aa9.38□□□□□ -0.91
CASC19-218ENST00000641218 RPS8P62241 208 aaKnown RBP9.38□□□□□ -0.91
CASC19-218ENST00000641218 LINC01559Q495D7 138 aa9.38□□□□□ -0.91
CASC19-218ENST00000641218 RTL5Q5HYW3 569 aaPredicted RBP9.38□□□□□ -0.91
CASC19-218ENST00000641218 MCM10Q7L590 875 aa9.38□□□□□ -0.91
CASC19-218ENST00000641218 USP17L1Q7RTZ2 530 aa9.38□□□□□ -0.91
CASC19-218ENST00000641218 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.38□□□□□ -0.91
CASC19-218ENST00000641218 KDM4CQ9H3R0 1056 aa9.38□□□□□ -0.91
CASC19-218ENST00000641218 MAP10Q9P2G4 905 aa9.38□□□□□ -0.91
CASC19-218ENST00000641218 RRP7AQ9Y3A4 280 aaKnown RBP9.38□□□□□ -0.91
CASC19-218ENST00000641218 PRKAR2BP31323 418 aa9.37□□□□□ -0.91
CASC19-218ENST00000641218 DACT2Q5SW24 774 aa9.37□□□□□ -0.91
CASC19-218ENST00000641218 FAM109BQ6ICB4 259 aaPredicted RBP9.37□□□□□ -0.91
CASC19-218ENST00000641218 NGEFQ8N5V2 710 aa9.37□□□□□ -0.91
CASC19-218ENST00000641218 DEFB123Q8N688 67 aa9.37□□□□□ -0.91
CASC19-218ENST00000641218 EHBP1Q8NDI1 1231 aa9.37□□□□□ -0.91
CASC19-218ENST00000641218 ANGEL1Q9UNK9 670 aaKnown RBP9.37□□□□□ -0.91
CASC19-218ENST00000641218 TRIM28Q13263 835 aaKnown RBP9.36□□□□□ -0.91
CASC19-218ENST00000641218 MTMR14Q8NCE2 650 aa9.36□□□□□ -0.91
CASC19-218ENST00000641218 GMPR2Q9P2T1 348 aaKnown RBP9.36□□□□□ -0.91
CASC19-218ENST00000641218 TRMT112Q9UI30 125 aaKnown RBP9.36□□□□□ -0.91
CASC19-218ENST00000641218 COL4A1P02462 1669 aa9.36□□□□□ -0.91
CASC19-218ENST00000641218 PPP1R12BO60237 982 aaPredicted RBP9.36□□□□□ -0.91
CASC19-218ENST00000641218 MYL6BP14649 208 aa9.36□□□□□ -0.91
CASC19-218ENST00000641218 STRIP1Q5VSL9 837 aa9.36□□□□□ -0.91
CASC19-218ENST00000641218 OGFOD1Q8N543 542 aa9.36□□□□□ -0.91
CASC19-218ENST00000641218 U2SURPO15042 1029 aaKnown RBP9.35□□□□□ -0.91
CASC19-218ENST00000641218 TLR2O60603 784 aa9.35□□□□□ -0.91
CASC19-218ENST00000641218 SH3D19Q5HYK7 790 aa9.35□□□□□ -0.91
CASC19-218ENST00000641218 HELBQ8NG08 1087 aaPredicted RBP9.35□□□□□ -0.91
CASC19-218ENST00000641218 ISCA1Q9BUE6 129 aa9.35□□□□□ -0.91
CASC19-218ENST00000641218 FAM117AQ9C073 453 aa9.35□□□□□ -0.91
CASC19-218ENST00000641218 ZFYVE28Q9HCC9 887 aa9.35□□□□□ -0.91
CASC19-218ENST00000641218 POLR3EQ9NVU0 708 aa9.35□□□□□ -0.91
CASC19-218ENST00000641218 GGA1Q9UJY5 639 aa9.35□□□□□ -0.91
CASC19-218ENST00000641218 ZNF804BA4D1E1 1349 aa9.34□□□□□ -0.91
CASC19-218ENST00000641218 VARSP26640 1264 aaKnown RBP9.34□□□□□ -0.91
CASC19-218ENST00000641218 CTHP32929 405 aa9.34□□□□□ -0.91
CASC19-218ENST00000641218 LACTBP83111 547 aaPredicted RBP9.34□□□□□ -0.91
CASC19-218ENST00000641218 MTFR1Q15390 333 aa9.34□□□□□ -0.91
CASC19-218ENST00000641218 ANKRD13AQ8IZ07 590 aa9.34□□□□□ -0.91
CASC19-218ENST00000641218 SH3TC2Q8TF17 1288 aa9.34□□□□□ -0.91
CASC19-218ENST00000641218 CLMNQ96JQ2 1002 aa9.34□□□□□ -0.91
CASC19-218ENST00000641218 DEFB129Q9H1M3 183 aa9.34□□□□□ -0.91
CASC19-218ENST00000641218 BABAM1Q9NWV8 329 aa9.34□□□□□ -0.91
CASC19-218ENST00000641218 SCAF8Q9UPN6 1271 aaKnown RBP9.34□□□□□ -0.91
CASC19-218ENST00000641218 MED23Q9ULK4 1368 aa9.33□□□□□ -0.92
CASC19-218ENST00000641218 USP2O75604 605 aaPredicted RBP9.33□□□□□ -0.92
CASC19-218ENST00000641218 UFL1O94874 794 aa9.33□□□□□ -0.92
CASC19-218ENST00000641218 DCTN1Q14203 1278 aa9.33□□□□□ -0.92
CASC19-218ENST00000641218 SKIV2LQ15477 1246 aaKnown RBP9.33□□□□□ -0.92
CASC19-218ENST00000641218 SUPT20HL1Q3ZLR7 823 aa9.33□□□□□ -0.92
CASC19-218ENST00000641218 ATP13A2Q9NQ11 1180 aa9.33□□□□□ -0.92
CASC19-218ENST00000641218 COL2A1P02458 1487 aaPredicted RBP9.33□□□□□ -0.92
CASC19-218ENST00000641218 XDHP47989 1333 aa9.32□□□□□ -0.92
CASC19-218ENST00000641218 ATP2B4P23634 1241 aa9.32□□□□□ -0.92
CASC19-218ENST00000641218 IREB2P48200 963 aaKnown RBP9.32□□□□□ -0.92
CASC19-218ENST00000641218 EIF4G2P78344 907 aaKnown RBP eCLIP9.32□□□□□ -0.92
CASC19-218ENST00000641218 BRI3BPQ8WY22 251 aa9.32□□□□□ -0.92
CASC19-218ENST00000641218 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms