RNA–Protein interactions for RNA: ENST00000639916.1

PAX6-259, Transcript of paired box 6, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PAX6, Length 2,622 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAX6-259ENST00000639916 TAF5LO75529 589 aa10.35□□□□□ -0.75
PAX6-259ENST00000639916 ELF1P32519 619 aa10.35□□□□□ -0.75
PAX6-259ENST00000639916 IRX1P78414 480 aaPredicted RBP10.35□□□□□ -0.75
PAX6-259ENST00000639916 DNM1Q05193 864 aaKnown RBP10.35□□□□□ -0.75
PAX6-259ENST00000639916 OTUD6BQ8N6M0 293 aa10.35□□□□□ -0.75
PAX6-259ENST00000639916 TRMT112Q9UI30 125 aaKnown RBP10.35□□□□□ -0.75
PAX6-259ENST00000639916 MAP2K7O14733 419 aa10.35□□□□□ -0.75
PAX6-259ENST00000639916 SYT1P21579 422 aa10.35□□□□□ -0.75
PAX6-259ENST00000639916 HSPA1LP34931 641 aa10.35□□□□□ -0.75
PAX6-259ENST00000639916 VPS53Q5VIR6 699 aa10.35□□□□□ -0.75
PAX6-259ENST00000639916 SARM1Q6SZW1 724 aa10.35□□□□□ -0.75
PAX6-259ENST00000639916 KBTBD3Q8NAB2 608 aa10.35□□□□□ -0.75
PAX6-259ENST00000639916 CARD6Q9BX69 1037 aa10.35□□□□□ -0.75
PAX6-259ENST00000639916 PDE11AQ9HCR9 933 aa10.35□□□□□ -0.75
PAX6-259ENST00000639916 A1CFQ9NQ94 594 aaKnown RBP10.35□□□□□ -0.75
PAX6-259ENST00000639916 PAG1Q9NWQ8 432 aa10.35□□□□□ -0.75
PAX6-259ENST00000639916 ATP6V1DQ9Y5K8 247 aa10.35□□□□□ -0.75
PAX6-259ENST00000639916 ERVV-1B6SEH8 477 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 PPFIA4O75335 1185 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 LIG3P49916 1009 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 APOBRQ0VD83 1088 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 SEC62Q99442 399 aaKnown RBP10.34□□□□□ -0.75
PAX6-259ENST00000639916 DNAJC25Q9H1X3 360 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 CDHR2Q9BYE9 1310 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 WNK3Q9BYP7 1800 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 IFIT1P09914 478 aaKnown RBP10.34□□□□□ -0.75
PAX6-259ENST00000639916 ERCC3P19447 782 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 PSMA5P28066 241 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 SCRN1Q12765 414 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 NEDD9Q14511 834 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 LONRF2Q1L5Z9 754 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 MCMDC2Q4G0Z9 681 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 CCDC129Q6ZRS4 1044 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 GPR161Q8N6U8 529 aaKnown RBP10.34□□□□□ -0.75
PAX6-259ENST00000639916 TTLL11Q8NHH1 800 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 ZNF526Q8TF50 670 aaPredicted RBP10.34□□□□□ -0.75
PAX6-259ENST00000639916 TNMDQ9H2S6 317 aa10.34□□□□□ -0.75
PAX6-259ENST00000639916 ZNF609O15014 1411 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 DOT1LQ8TEK3 1739 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 IRS4O14654 1257 aaPredicted RBP10.33□□□□□ -0.76
PAX6-259ENST00000639916 ITGA6P23229 1130 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 TBC1D8BQ0IIM8 1120 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 TEX11Q8IYF3 940 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 PARD6BQ9BYG5 372 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 GREM2Q9H772 168 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 DNAI1Q9UI46 699 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 MCM8Q9UJA3 840 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 FAN1Q9Y2M0 1017 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.33□□□□□ -0.76
PAX6-259ENST00000639916 RFX7Q2KHR2 1363 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 LOC102724428A0A0B4J2F2 783 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 FANCGO15287 622 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 N4BP1O75113 896 aaKnown RBP10.33□□□□□ -0.76
PAX6-259ENST00000639916 SIK1P57059 783 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 ETF1P62495 437 aaKnown RBP10.33□□□□□ -0.76
PAX6-259ENST00000639916 LRRFIP1Q32MZ4 808 aaKnown RBP10.33□□□□□ -0.76
PAX6-259ENST00000639916 INTS5Q6P9B9 1019 aaKnown RBP10.33□□□□□ -0.76
PAX6-259ENST00000639916 LDHAL6AQ6ZMR3 332 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 BARGINQ6ZT62 677 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 TATDN2Q93075 761 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 CCDC87Q9NVE4 849 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 TAF6LQ9Y6J9 622 aa10.33□□□□□ -0.76
PAX6-259ENST00000639916 PHLPP2Q6ZVD8 1323 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 PSDA5PKW4 1024 aaPredicted RBP10.32□□□□□ -0.76
PAX6-259ENST00000639916 TUBB4AP04350 444 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 CRKLP46109 303 aaKnown RBP10.32□□□□□ -0.76
PAX6-259ENST00000639916 CTSWP56202 376 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 COL9A3Q14050 684 aaPredicted RBP10.32□□□□□ -0.76
PAX6-259ENST00000639916 JAKMIP3Q5VZ66 844 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 NRAPQ86VF7 1730 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 N4BP2L2Q92802 583 aaPredicted RBP10.32□□□□□ -0.76
PAX6-259ENST00000639916 XAGE2Q96GT9 111 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 NBPF3Q9H094 633 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 FAM107BQ9H098 131 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 VEZTQ9HBM0 779 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 HMG20BQ9P0W2 317 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 JCADQ9P266 1359 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 ANKRD18BA2A2Z9 1011 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 URI1O94763 535 aaPredicted RBP10.32□□□□□ -0.76
PAX6-259ENST00000639916 LARGE1O95461 756 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 GCFC2P16383 781 aaKnown RBP10.32□□□□□ -0.76
PAX6-259ENST00000639916 ADORA1P30542 326 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 RBM5P52756 815 aaKnown RBP eCLIP10.32□□□□□ -0.76
PAX6-259ENST00000639916 FKBP4Q02790 459 aaKnown RBP eCLIP10.32□□□□□ -0.76
PAX6-259ENST00000639916 USPL1Q5W0Q7 1092 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 RBM43Q6ZSC3 357 aaKnown RBP10.32□□□□□ -0.76
PAX6-259ENST00000639916 ZNF34Q8IZ26 560 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 CTCFLQ8NI51 663 aaPredicted RBP10.32□□□□□ -0.76
PAX6-259ENST00000639916 ZSCAN31Q96LW9 406 aaPredicted RBP10.32□□□□□ -0.76
PAX6-259ENST00000639916 DACT1Q9NYF0 836 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 UBN2Q6ZU65 1347 aa10.32□□□□□ -0.76
PAX6-259ENST00000639916 KCNQ2O43526 872 aa10.31□□□□□ -0.76
PAX6-259ENST00000639916 PDE8AO60658 829 aa10.31□□□□□ -0.76
PAX6-259ENST00000639916 ARID4AP29374 1257 aaPredicted RBP10.31□□□□□ -0.76
PAX6-259ENST00000639916 METTL24Q5JXM2 366 aa10.31□□□□□ -0.76
PAX6-259ENST00000639916 TTC39AQ5SRH9 613 aa10.31□□□□□ -0.76
PAX6-259ENST00000639916 BLOC1S2Q6QNY1 142 aa10.31□□□□□ -0.76
PAX6-259ENST00000639916 HOMER1Q86YM7 354 aa10.31□□□□□ -0.76
PAX6-259ENST00000639916 FMNL3Q8IVF7 1028 aa10.31□□□□□ -0.76
PAX6-259ENST00000639916 CNNM3Q8NE01 707 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms