RNA–Protein interactions for RNA: ENST00000639240.1

ATM-228, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 498 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-228ENST00000639240 TRAK1Q9UPV9 953 aa5.7□□□□□ -1.5
ATM-228ENST00000639240 LEFTY1O75610 366 aa5.69□□□□□ -1.5
ATM-228ENST00000639240 LDHBP07195 334 aaKnown RBP5.69□□□□□ -1.5
ATM-228ENST00000639240 NEFMP07197 916 aa5.69□□□□□ -1.5
ATM-228ENST00000639240 BNIP3Q12983 259 aa5.69□□□□□ -1.5
ATM-228ENST00000639240 DUSP27Q5VZP5 1158 aa5.69□□□□□ -1.5
ATM-228ENST00000639240 ALG1LQ6GMV1 187 aa5.69□□□□□ -1.5
ATM-228ENST00000639240 NXPE4Q6UWF7 544 aa5.69□□□□□ -1.5
ATM-228ENST00000639240 TP53INP2Q8IXH6 220 aa5.69□□□□□ -1.5
ATM-228ENST00000639240 BCL7CQ8WUZ0 217 aaPredicted RBP5.69□□□□□ -1.5
ATM-228ENST00000639240 ZFYVE1Q9HBF4 777 aa5.69□□□□□ -1.5
ATM-228ENST00000639240 RBAK-RBAKDNI3L0D1 243 aa5.68□□□□□ -1.5
ATM-228ENST00000639240 ITGB5P18084 799 aa5.68□□□□□ -1.5
ATM-228ENST00000639240 ID3Q02535 119 aa5.68□□□□□ -1.5
ATM-228ENST00000639240 TTLL4Q14679 1199 aa5.68□□□□□ -1.5
ATM-228ENST00000639240 HP1BP3Q5SSJ5 553 aaPredicted RBP5.68□□□□□ -1.5
ATM-228ENST00000639240 DNAJC14Q6Y2X3 702 aaPredicted RBP5.68□□□□□ -1.5
ATM-228ENST00000639240 DTHD1Q6ZMT9 781 aa5.68□□□□□ -1.5
ATM-228ENST00000639240 FAM181AQ8N9Y4 354 aa5.68□□□□□ -1.5
ATM-228ENST00000639240 C3orf58Q8NDZ4 430 aa5.68□□□□□ -1.5
ATM-228ENST00000639240 FLCNQ8NFG4 579 aa5.68□□□□□ -1.5
ATM-228ENST00000639240 DDX54Q8TDD1 881 aaKnown RBP5.68□□□□□ -1.5
ATM-228ENST00000639240 FBF1Q8TES7 1133 aa5.68□□□□□ -1.5
ATM-228ENST00000639240 FBXL18Q96ME1 805 aa5.68□□□□□ -1.5
ATM-228ENST00000639240 FAM87AP0C7U9 286 aa5.67□□□□□ -1.5
ATM-228ENST00000639240 HCLS1P14317 486 aaPredicted RBP5.67□□□□□ -1.5
ATM-228ENST00000639240 CD96P40200 585 aa5.67□□□□□ -1.5
ATM-228ENST00000639240 CYP27A1Q02318 531 aa5.67□□□□□ -1.5
ATM-228ENST00000639240 EAPPQ56P03 285 aaPredicted RBP5.67□□□□□ -1.5
ATM-228ENST00000639240 RASIP1Q5U651 963 aa5.67□□□□□ -1.5
ATM-228ENST00000639240 PLD6Q8N2A8 252 aaKnown RBP5.67□□□□□ -1.5
ATM-228ENST00000639240 KRT82Q9NSB4 513 aa5.67□□□□□ -1.5
ATM-228ENST00000639240 TMEM39AQ9NV64 488 aa5.67□□□□□ -1.5
ATM-228ENST00000639240 CACNA2D2Q9NY47 1150 aa5.67□□□□□ -1.5
ATM-228ENST00000639240 NTF4P34130 210 aa5.66□□□□□ -1.5
ATM-228ENST00000639240 ZNF252P-AS1Q0IIN9 211 aa5.66□□□□□ -1.5
ATM-228ENST00000639240 ZC3H12AQ5D1E8 599 aaKnown RBP5.66□□□□□ -1.5
ATM-228ENST00000639240 FAM214BQ7L5A3 538 aa5.66□□□□□ -1.5
ATM-228ENST00000639240 UBE3DQ7Z6J8 389 aa5.66□□□□□ -1.5
ATM-228ENST00000639240 NPAS4Q8IUM7 802 aa5.66□□□□□ -1.5
ATM-228ENST00000639240 SULF2Q8IWU5 870 aa5.66□□□□□ -1.5
ATM-228ENST00000639240 SMYD4Q8IYR2 804 aaPredicted RBP5.66□□□□□ -1.5
ATM-228ENST00000639240 GRIN3AQ8TCU5 1115 aa5.66□□□□□ -1.5
ATM-228ENST00000639240 OSBPL7Q9BZF2 842 aa5.66□□□□□ -1.5
ATM-228ENST00000639240 GPN3Q9UHW5 284 aaPredicted RBP5.66□□□□□ -1.5
ATM-228ENST00000639240 PLAGL2Q9UPG8 496 aa5.66□□□□□ -1.5
ATM-228ENST00000639240 AKAP2Q9Y2D5 859 aa5.66□□□□□ -1.5
ATM-228ENST00000639240 PAGE1O75459 146 aa5.65□□□□□ -1.5
ATM-228ENST00000639240 PAPLNO95428 1278 aa5.65□□□□□ -1.5
ATM-228ENST00000639240 SLFN14P0C7P3 912 aa5.65□□□□□ -1.5
ATM-228ENST00000639240 BMP6P22004 513 aa5.65□□□□□ -1.5
ATM-228ENST00000639240 ARNTP27540 789 aa5.65□□□□□ -1.5
ATM-228ENST00000639240 OGFOD2Q6N063 350 aa5.65□□□□□ -1.5
ATM-228ENST00000639240 GPBAR1Q8TDU6 330 aa5.65□□□□□ -1.5
ATM-228ENST00000639240 KCNB2Q92953 911 aa5.65□□□□□ -1.5
ATM-228ENST00000639240 ISL2Q96A47 359 aa5.65□□□□□ -1.5
ATM-228ENST00000639240 ATXN3LQ9H3M9 355 aa5.65□□□□□ -1.5
ATM-228ENST00000639240 SPG7Q9UQ90 795 aa5.65□□□□□ -1.5
ATM-228ENST00000639240 ENC1O14682 589 aa5.64□□□□□ -1.51
ATM-228ENST00000639240 PRPF40AO75400 957 aaKnown RBP5.64□□□□□ -1.51
ATM-228ENST00000639240 CD8BP10966 210 aa5.64□□□□□ -1.51
ATM-228ENST00000639240 XRCC5P13010 732 aaKnown RBP5.64□□□□□ -1.51
ATM-228ENST00000639240 TMCO4Q5TGY1 634 aa5.64□□□□□ -1.51
ATM-228ENST00000639240 MAP1SQ66K74 1059 aaPredicted RBP5.64□□□□□ -1.51
ATM-228ENST00000639240 HEXIM2Q96MH2 286 aaKnown RBP5.64□□□□□ -1.51
ATM-228ENST00000639240 NECAB3Q96P71 396 aaPredicted RBP5.64□□□□□ -1.51
ATM-228ENST00000639240 DUSP9Q99956 384 aaKnown RBP5.64□□□□□ -1.51
ATM-228ENST00000639240 DUSP23Q9BVJ7 150 aa5.64□□□□□ -1.51
ATM-228ENST00000639240 SRCIN1Q9C0H9 1055 aa5.64□□□□□ -1.51
ATM-228ENST00000639240 ADAMTS6Q9UKP5 1117 aa5.64□□□□□ -1.51
ATM-228ENST00000639240 SLC5A6Q9Y289 635 aa5.64□□□□□ -1.51
ATM-228ENST00000639240 CARMIL2Q6F5E8 1435 aa5.64□□□□□ -1.51
ATM-228ENST00000639240 GIPC1O14908 333 aa5.63□□□□□ -1.51
ATM-228ENST00000639240 RNGTTO60942 597 aaKnown RBP5.63□□□□□ -1.51
ATM-228ENST00000639240 ERCC3P19447 782 aa5.63□□□□□ -1.51
ATM-228ENST00000639240 NME2P22392 152 aa5.63□□□□□ -1.51
ATM-228ENST00000639240 GSTT1P30711 240 aa5.63□□□□□ -1.51
ATM-228ENST00000639240 OXCT1P55809 520 aa5.63□□□□□ -1.51
ATM-228ENST00000639240 FGD1P98174 961 aa5.63□□□□□ -1.51
ATM-228ENST00000639240 RING1Q06587 406 aa5.63□□□□□ -1.51
ATM-228ENST00000639240 ZNF792Q3KQV3 632 aa5.63□□□□□ -1.51
ATM-228ENST00000639240 PIDD1Q9HB75 910 aa5.63□□□□□ -1.51
ATM-228ENST00000639240 RNF19AQ9NV58 838 aa5.63□□□□□ -1.51
ATM-228ENST00000639240 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.63□□□□□ -1.51
ATM-228ENST00000639240 FBXO24O75426 580 aa5.62□□□□□ -1.51
ATM-228ENST00000639240 GNA15P30679 374 aa5.62□□□□□ -1.51
ATM-228ENST00000639240 PPP2R3AQ06190 1150 aa5.62□□□□□ -1.51
ATM-228ENST00000639240 TRIM26Q12899 539 aaPredicted RBP5.62□□□□□ -1.51
ATM-228ENST00000639240 CYP27C1Q4G0S4 372 aa5.62□□□□□ -1.51
ATM-228ENST00000639240 AGBL5Q8NDL9 886 aa5.62□□□□□ -1.51
ATM-228ENST00000639240 NETO1Q8TDF5 533 aa5.62□□□□□ -1.51
ATM-228ENST00000639240 C12orf49Q9H741 205 aa5.62□□□□□ -1.51
ATM-228ENST00000639240 MBNL3Q9NUK0 354 aaKnown RBP5.62□□□□□ -1.51
ATM-228ENST00000639240 PCOLCE2Q9UKZ9 415 aa5.62□□□□□ -1.51
ATM-228ENST00000639240 CSADQ9Y600 493 aa5.62□□□□□ -1.51
ATM-228ENST00000639240 RNASE1P07998 156 aaKnown RBP5.61□□□□□ -1.51
ATM-228ENST00000639240 USP17L7P0C7H9 530 aa5.61□□□□□ -1.51
ATM-228ENST00000639240 ERVK-24P63145 666 aa5.61□□□□□ -1.51
ATM-228ENST00000639240 TAGLNQ01995 201 aaKnown RBP5.61□□□□□ -1.51
ATM-228ENST00000639240 PPM1JQ5JR12 505 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms