RNA–Protein interactions for RNA: ENST00000638163.1

LINC00598-216, long intergenic non-protein coding RNA 598, humanhuman

TSL 4 BASIC

Gene LINC00598, Length 528 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00598-216ENST00000638163 CRKP46108 304 aa12.19□□□□□ -0.46
LINC00598-216ENST00000638163 DIXDC1Q155Q3 683 aa12.19□□□□□ -0.46
LINC00598-216ENST00000638163 FKBP1CQ5VVH2 108 aa12.19□□□□□ -0.46
LINC00598-216ENST00000638163 TTC6Q86TZ1 520 aa12.19□□□□□ -0.46
LINC00598-216ENST00000638163 DPF2Q92785 391 aa12.19□□□□□ -0.46
LINC00598-216ENST00000638163 UPF3BQ9BZI7 483 aaKnown RBP12.19□□□□□ -0.46
LINC00598-216ENST00000638163 KIF3AQ9Y496 699 aa12.19□□□□□ -0.46
LINC00598-216ENST00000638163 MYO1BO43795 1136 aa12.18□□□□□ -0.46
LINC00598-216ENST00000638163 ORC4O43929 436 aa12.18□□□□□ -0.46
LINC00598-216ENST00000638163 ADCK5Q3MIX3 580 aa12.18□□□□□ -0.46
LINC00598-216ENST00000638163 SLFNL1Q499Z3 407 aa12.18□□□□□ -0.46
LINC00598-216ENST00000638163 CERS5Q8N5B7 392 aa12.18□□□□□ -0.46
LINC00598-216ENST00000638163 IDI2Q9BXS1 227 aa12.18□□□□□ -0.46
LINC00598-216ENST00000638163 MKRN1Q9UHC7 482 aaKnown RBP12.18□□□□□ -0.46
LINC00598-216ENST00000638163 JAG2Q9Y219 1238 aa12.18□□□□□ -0.46
LINC00598-216ENST00000638163 FLT1P17948 1338 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 MYO5AQ9Y4I1 1855 aaKnown RBP12.17□□□□□ -0.46
LINC00598-216ENST00000638163 YDJCA8MPS7 323 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 FZD9O00144 591 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 ENTPD3O75355 529 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 HLA-DOAP06340 250 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 USP17L8P0C7I0 530 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 LIFRP42702 1097 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 EVCP57679 992 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 RHBDL3P58872 404 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 DYNLL1P63167 89 aaKnown RBP12.17□□□□□ -0.46
LINC00598-216ENST00000638163 EXOSC10Q01780 885 aaKnown RBP12.17□□□□□ -0.46
LINC00598-216ENST00000638163 CUL4AQ13619 759 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 PPP2R5BQ15173 497 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 C12orf60Q5U649 245 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 CTR9Q6PD62 1173 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 SLC51AQ86UW1 340 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 IQCA1Q86XH1 822 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 MB21D2Q8IYB1 491 aaPredicted RBP12.17□□□□□ -0.46
LINC00598-216ENST00000638163 SH3RF3Q8TEJ3 882 aaPredicted RBP12.17□□□□□ -0.46
LINC00598-216ENST00000638163 SDR42E1Q8WUS8 393 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 ZNF274Q96GC6 653 aaPredicted RBP12.17□□□□□ -0.46
LINC00598-216ENST00000638163 GMLQ99445 158 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 EHD4Q9H223 541 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 MCM9Q9NXL9 1143 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 SWAP70Q9UH65 585 aa12.17□□□□□ -0.46
LINC00598-216ENST00000638163 MYH2Q9UKX2 1941 aa12.16□□□□□ -0.46
LINC00598-216ENST00000638163 USP17L12C9JPN9 530 aa12.16□□□□□ -0.46
LINC00598-216ENST00000638163 USP17L21D6R901 530 aa12.16□□□□□ -0.46
LINC00598-216ENST00000638163 PSMD14O00487 310 aa12.16□□□□□ -0.46
LINC00598-216ENST00000638163 POLR3DP05423 398 aaPredicted RBP12.16□□□□□ -0.46
LINC00598-216ENST00000638163 AK2P54819 239 aa12.16□□□□□ -0.46
LINC00598-216ENST00000638163 TNFAIP1Q13829 316 aa12.16□□□□□ -0.46
LINC00598-216ENST00000638163 KIAA0825Q8IV33 1275 aa12.16□□□□□ -0.46
LINC00598-216ENST00000638163 RGS22Q8NE09 1264 aa12.16□□□□□ -0.46
LINC00598-216ENST00000638163 TMX3Q96JJ7 454 aa12.16□□□□□ -0.46
LINC00598-216ENST00000638163 UBAC1Q9BSL1 405 aa12.16□□□□□ -0.46
LINC00598-216ENST00000638163 USP40Q9NVE5 1235 aa12.16□□□□□ -0.46
LINC00598-216ENST00000638163 ANGEL1Q9UNK9 670 aaKnown RBP12.16□□□□□ -0.46
LINC00598-216ENST00000638163 MINDY4BA8MYZ0 360 aa12.15□□□□□ -0.46
LINC00598-216ENST00000638163 PRC1O43663 620 aa12.15□□□□□ -0.46
LINC00598-216ENST00000638163 PRKAB2O43741 272 aa12.15□□□□□ -0.46
LINC00598-216ENST00000638163 RBM5P52756 815 aaKnown RBP eCLIP12.15□□□□□ -0.46
LINC00598-216ENST00000638163 HAND2P61296 217 aa12.15□□□□□ -0.46
LINC00598-216ENST00000638163 DLGAP5Q15398 846 aa12.15□□□□□ -0.46
LINC00598-216ENST00000638163 APOBEC3HQ6NTF7 200 aaKnown RBP12.15□□□□□ -0.46
LINC00598-216ENST00000638163 SYNE3Q6ZMZ3 975 aa12.15□□□□□ -0.46
LINC00598-216ENST00000638163 SGMS1Q86VZ5 419 aa12.15□□□□□ -0.46
LINC00598-216ENST00000638163 TBC1D10CQ8IV04 446 aa12.15□□□□□ -0.46
LINC00598-216ENST00000638163 TGFBRAP1Q8WUH2 860 aa12.15□□□□□ -0.46
LINC00598-216ENST00000638163 LLPHQ9BRT6 129 aaKnown RBP12.15□□□□□ -0.46
LINC00598-216ENST00000638163 LAMB1P07942 1786 aa12.15□□□□□ -0.46
LINC00598-216ENST00000638163 ZNF646O15015 1829 aaPredicted RBP12.14□□□□□ -0.47
LINC00598-216ENST00000638163 CHD4Q14839 1912 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 CCDC196A0A1B0GTZ2 297 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 SPDYE2BA6NHP3 402 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 F8W031 263 aaPredicted RBP12.14□□□□□ -0.47
LINC00598-216ENST00000638163 SPDYE6P0CI01 402 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 CALM1P0DP23 149 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 CALM2P0DP24 149 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 CALM3P0DP25 149 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 PDCP20941 246 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 TNNI2P48788 182 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 ZNF280AP59817 542 aaPredicted RBP12.14□□□□□ -0.47
LINC00598-216ENST00000638163 NUCB2P80303 420 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 CXCL9Q07325 125 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 GRIK5Q16478 980 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 CFAP100Q494V2 611 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 CDC42EP5Q6NZY7 148 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 CPLX2Q6PUV4 134 aaKnown RBP12.14□□□□□ -0.47
LINC00598-216ENST00000638163 Q6ZUG5 572 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 STOX1Q6ZVD7 989 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 GPC2Q8N158 579 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 HOOK2Q96ED9 719 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 CHMP5Q9NZZ3 219 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 ATRNL1Q5VV63 1379 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 NAV1Q8NEY1 1877 aa12.14□□□□□ -0.47
LINC00598-216ENST00000638163 UTRNP46939 3433 aa12.13□□□□□ -0.47
LINC00598-216ENST00000638163 WDHD1O75717 1129 aaPredicted RBP12.13□□□□□ -0.47
LINC00598-216ENST00000638163 RAD17O75943 681 aa12.13□□□□□ -0.47
LINC00598-216ENST00000638163 CDKL5O76039 1030 aa12.13□□□□□ -0.47
LINC00598-216ENST00000638163 HMGN5P82970 282 aaKnown RBP12.13□□□□□ -0.47
LINC00598-216ENST00000638163 TOB2Q14106 344 aaPredicted RBP12.13□□□□□ -0.47
LINC00598-216ENST00000638163 ARHGAP27Q6ZUM4 889 aa12.13□□□□□ -0.47
LINC00598-216ENST00000638163 C16orf86Q6ZW13 317 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms