RNA–Protein interactions for RNA: ENST00000637671.1

SYNGAP1-223, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 100 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-223ENST00000637671 ZSCAN29Q8IWY8 852 aaPredicted RBP14.68□□□□□ -0.06
SYNGAP1-223ENST00000637671 COA7Q96BR5 231 aa14.68□□□□□ -0.06
SYNGAP1-223ENST00000637671 MRS2Q9HD23 443 aa14.68□□□□□ -0.06
SYNGAP1-223ENST00000637671 FAM198AQ9UFP1 575 aa14.68□□□□□ -0.06
SYNGAP1-223ENST00000637671 STAP2Q9UGK3 403 aa14.68□□□□□ -0.06
SYNGAP1-223ENST00000637671 LRRFIP2Q9Y608 721 aaKnown RBP14.68□□□□□ -0.06
SYNGAP1-223ENST00000637671 EYA2O00167 538 aa14.67□□□□□ -0.06
SYNGAP1-223ENST00000637671 SOX1O00570 391 aaPredicted RBP14.67□□□□□ -0.06
SYNGAP1-223ENST00000637671 PTPRAP18433 802 aa14.67□□□□□ -0.06
SYNGAP1-223ENST00000637671 PRDX5P30044 214 aa14.67□□□□□ -0.06
SYNGAP1-223ENST00000637671 NECAB2Q7Z6G3 386 aa14.67□□□□□ -0.06
SYNGAP1-223ENST00000637671 PAK6Q9NQU5 681 aaPredicted RBP14.67□□□□□ -0.06
SYNGAP1-223ENST00000637671 CUL9Q8IWT3 2517 aa14.66□□□□□ -0.06
SYNGAP1-223ENST00000637671 PHF20L1A8MW92 1017 aa14.66□□□□□ -0.06
SYNGAP1-223ENST00000637671 ENTPD3O75355 529 aa14.66□□□□□ -0.06
SYNGAP1-223ENST00000637671 LRCH3Q96II8 777 aa14.66□□□□□ -0.06
SYNGAP1-223ENST00000637671 PAWRQ96IZ0 340 aaKnown RBP14.66□□□□□ -0.06
SYNGAP1-223ENST00000637671 CRISPLD2Q9H0B8 497 aa14.66□□□□□ -0.06
SYNGAP1-223ENST00000637671 PNMA3Q9UL41 463 aa14.66□□□□□ -0.06
SYNGAP1-223ENST00000637671 AFG3L2Q9Y4W6 797 aa14.66□□□□□ -0.06
SYNGAP1-223ENST00000637671 AK9Q5TCS8 1911 aa14.65□□□□□ -0.06
SYNGAP1-223ENST00000637671 ATRNL1Q5VV63 1379 aa14.65□□□□□ -0.06
SYNGAP1-223ENST00000637671 TRIM75PA6NK02 468 aa14.65□□□□□ -0.06
SYNGAP1-223ENST00000637671 SEMA3EO15041 775 aa14.65□□□□□ -0.06
SYNGAP1-223ENST00000637671 RGS3P49796 1198 aa14.65□□□□□ -0.06
SYNGAP1-223ENST00000637671 MNX1P50219 401 aaPredicted RBP14.65□□□□□ -0.06
SYNGAP1-223ENST00000637671 DENND2AQ9ULE3 1009 aa14.65□□□□□ -0.06
SYNGAP1-223ENST00000637671 PTPRCP08575 1304 aa14.65□□□□□ -0.06
SYNGAP1-223ENST00000637671 SALL1Q9NSC2 1324 aa14.65□□□□□ -0.06
SYNGAP1-223ENST00000637671 MGAMO43451 1857 aa14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 CTNND1O60716 968 aaKnown RBP14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 ATP2B3Q16720 1220 aa14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 GPR153Q6NV75 609 aa14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 DZIP1Q86YF9 867 aaKnown RBP14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 ZFPM1Q8IX07 1006 aa14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 SLF2Q8IX21 1173 aa14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 C7orf61Q8IZ16 206 aa14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 ZGPATQ8N5A5 531 aaKnown RBP14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 ANKRD13CQ8N6S4 541 aa14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 ANKLE1Q8NAG6 615 aa14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 IDI2Q9BXS1 227 aa14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 AGTPBP1Q9UPW5 1226 aa14.64□□□□□ -0.07
SYNGAP1-223ENST00000637671 BMP8BP34820 402 aa14.63□□□□□ -0.07
SYNGAP1-223ENST00000637671 FAM110CQ1W6H9 321 aa14.63□□□□□ -0.07
SYNGAP1-223ENST00000637671 MYH13Q9UKX3 1938 aa14.62□□□□□ -0.07
SYNGAP1-223ENST00000637671 DOCK2Q92608 1830 aa14.62□□□□□ -0.07
SYNGAP1-223ENST00000637671 HMGCRP04035 888 aa14.62□□□□□ -0.07
SYNGAP1-223ENST00000637671 DEFB123Q8N688 67 aa14.62□□□□□ -0.07
SYNGAP1-223ENST00000637671 DIS3LQ8TF46 1054 aaKnown RBP14.62□□□□□ -0.07
SYNGAP1-223ENST00000637671 GDF15Q99988 308 aa14.62□□□□□ -0.07
SYNGAP1-223ENST00000637671 USP44Q9H0E7 712 aa14.62□□□□□ -0.07
SYNGAP1-223ENST00000637671 CEP126Q9P2H0 1117 aa14.62□□□□□ -0.07
SYNGAP1-223ENST00000637671 FBXO3Q9UK99 471 aa14.62□□□□□ -0.07
SYNGAP1-223ENST00000637671 ZMYND8Q9ULU4 1186 aaPredicted RBP14.62□□□□□ -0.07
SYNGAP1-223ENST00000637671 CIAO1O76071 339 aa14.61□□□□□ -0.07
SYNGAP1-223ENST00000637671 RFX5P48382 616 aaPredicted RBP14.61□□□□□ -0.07
SYNGAP1-223ENST00000637671 GCLCP48506 637 aaPredicted RBP14.61□□□□□ -0.07
SYNGAP1-223ENST00000637671 PABPC4Q13310 644 aaKnown RBP eCLIP14.61□□□□□ -0.07
SYNGAP1-223ENST00000637671 MRPL50Q8N5N7 158 aaKnown RBP14.61□□□□□ -0.07
SYNGAP1-223ENST00000637671 PROCA1Q8NCQ7 364 aaPredicted RBP14.61□□□□□ -0.07
SYNGAP1-223ENST00000637671 NBPF3Q9H094 633 aa14.61□□□□□ -0.07
SYNGAP1-223ENST00000637671 SIL1Q9H173 461 aa14.61□□□□□ -0.07
SYNGAP1-223ENST00000637671 GAKO14976 1311 aa14.61□□□□□ -0.07
SYNGAP1-223ENST00000637671 RFX7Q2KHR2 1363 aa14.6□□□□□ -0.07
SYNGAP1-223ENST00000637671 DDTLA6NHG4 134 aaPredicted RBP14.6□□□□□ -0.07
SYNGAP1-223ENST00000637671 PHKA1P46020 1223 aa14.6□□□□□ -0.07
SYNGAP1-223ENST00000637671 MAP3K10Q02779 954 aa14.6□□□□□ -0.07
SYNGAP1-223ENST00000637671 PICALMQ13492 652 aa14.6□□□□□ -0.07
SYNGAP1-223ENST00000637671 TREML2Q5T2D2 321 aa14.6□□□□□ -0.07
SYNGAP1-223ENST00000637671 SPTY2D1Q68D10 685 aaPredicted RBP14.6□□□□□ -0.07
SYNGAP1-223ENST00000637671 SH3BP5LQ7L8J4 393 aa14.6□□□□□ -0.07
SYNGAP1-223ENST00000637671 ATG9AQ7Z3C6 839 aa14.6□□□□□ -0.07
SYNGAP1-223ENST00000637671 HMX1Q9NP08 348 aaPredicted RBP14.6□□□□□ -0.07
SYNGAP1-223ENST00000637671 RPTORQ8N122 1335 aa14.6□□□□□ -0.07
SYNGAP1-223ENST00000637671 TBC1D2Q9BYX2 928 aa14.59□□□□□ -0.07
SYNGAP1-223ENST00000637671 C11orf49Q9H6J7 331 aa14.59□□□□□ -0.07
SYNGAP1-223ENST00000637671 ABCF2Q9UG63 623 aa14.59□□□□□ -0.07
SYNGAP1-223ENST00000637671 STXBP5LQ9Y2K9 1186 aa14.59□□□□□ -0.07
SYNGAP1-223ENST00000637671 DOCK1Q14185 1865 aa14.59□□□□□ -0.07
SYNGAP1-223ENST00000637671 TBC1D12O60347 775 aa14.58□□□□□ -0.08
SYNGAP1-223ENST00000637671 IL15P40933 162 aaPredicted RBP14.58□□□□□ -0.08
SYNGAP1-223ENST00000637671 BTDP43251 543 aa14.58□□□□□ -0.08
SYNGAP1-223ENST00000637671 LRIT3Q3SXY7 679 aa14.58□□□□□ -0.08
SYNGAP1-223ENST00000637671 CCDC84Q86UT8 332 aaPredicted RBP14.58□□□□□ -0.08
SYNGAP1-223ENST00000637671 TDHQ8IZJ6 230 aa14.58□□□□□ -0.08
SYNGAP1-223ENST00000637671 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.58□□□□□ -0.08
SYNGAP1-223ENST00000637671 DDX4Q9NQI0 724 aaKnown RBP14.58□□□□□ -0.08
SYNGAP1-223ENST00000637671 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.58□□□□□ -0.08
SYNGAP1-223ENST00000637671 ZBTB22O15209 634 aa14.57□□□□□ -0.08
SYNGAP1-223ENST00000637671 UBTFL1P0CB47 393 aaPredicted RBP14.57□□□□□ -0.08
SYNGAP1-223ENST00000637671 SYN1P17600 705 aa14.57□□□□□ -0.08
SYNGAP1-223ENST00000637671 MAGEA10P43363 369 aaPredicted RBP14.57□□□□□ -0.08
SYNGAP1-223ENST00000637671 SPP2Q13103 211 aa14.57□□□□□ -0.08
SYNGAP1-223ENST00000637671 CCDC102BQ68D86 513 aa14.57□□□□□ -0.08
SYNGAP1-223ENST00000637671 ZNF280CQ8ND82 737 aa14.57□□□□□ -0.08
SYNGAP1-223ENST00000637671 FAM163AQ96GL9 167 aaPredicted RBP14.57□□□□□ -0.08
SYNGAP1-223ENST00000637671 UBE2OQ9C0C9 1292 aaKnown RBP14.57□□□□□ -0.08
SYNGAP1-223ENST00000637671 OSBPL5Q9H0X9 879 aaPredicted RBP14.57□□□□□ -0.08
SYNGAP1-223ENST00000637671 HDAC5Q9UQL6 1122 aa14.57□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms