RNA–Protein interactions for RNA: ENST00000637519.1

CHRNA7-228, Transcript of cholinergic receptor nicotinic alpha 7 subunit, humanhuman

TSL 5

Gene CHRNA7, Length 2,084 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA7-228ENST00000637519 RBM27Q9P2N5 1060 aaKnown RBP25.43■■□□□ 1.66
CHRNA7-228ENST00000637519 MFSD14BQ5SR56 506 aa25.43■■□□□ 1.66
CHRNA7-228ENST00000637519 CAVIN1Q6NZI2 390 aaKnown RBP25.43■■□□□ 1.66
CHRNA7-228ENST00000637519 DPP8Q6V1X1 898 aaPredicted RBP25.43■■□□□ 1.66
CHRNA7-228ENST00000637519 SH3RF3Q8TEJ3 882 aaPredicted RBP25.43■■□□□ 1.66
CHRNA7-228ENST00000637519 TMEM87BQ96K49 555 aa25.43■■□□□ 1.66
CHRNA7-228ENST00000637519 FDPSP14324 419 aaKnown RBP25.42■■□□□ 1.66
CHRNA7-228ENST00000637519 APOA5Q6Q788 366 aa25.42■■□□□ 1.66
CHRNA7-228ENST00000637519 NFXL1Q6ZNB6 911 aa25.42■■□□□ 1.66
CHRNA7-228ENST00000637519 ANAPC4Q9UJX5 808 aa25.42■■□□□ 1.66
CHRNA7-228ENST00000637519 DOK7Q18PE1 504 aa25.41■■□□□ 1.66
CHRNA7-228ENST00000637519 FBXW7Q969H0 707 aa25.41■■□□□ 1.66
CHRNA7-228ENST00000637519 H3BQV1 296 aa25.41■■□□□ 1.66
CHRNA7-228ENST00000637519 GTF2IP78347 998 aa25.41■■□□□ 1.66
CHRNA7-228ENST00000637519 HMGN5P82970 282 aaKnown RBP25.41■■□□□ 1.66
CHRNA7-228ENST00000637519 GUCY1B3Q02153 619 aa25.41■■□□□ 1.66
CHRNA7-228ENST00000637519 SF3B2Q13435 895 aaKnown RBP25.41■■□□□ 1.66
CHRNA7-228ENST00000637519 IFFO2Q5TF58 517 aa25.41■■□□□ 1.66
CHRNA7-228ENST00000637519 RNF41Q9H4P4 317 aaPredicted RBP25.41■■□□□ 1.66
CHRNA7-228ENST00000637519 ATP6V1DQ9Y5K8 247 aa25.4■■□□□ 1.66
CHRNA7-228ENST00000637519 KIAA1551Q9HCM1 1747 aa25.4■■□□□ 1.66
CHRNA7-228ENST00000637519 ADD1P35611 737 aaKnown RBP25.4■■□□□ 1.66
CHRNA7-228ENST00000637519 BAG6P46379 1132 aa25.4■■□□□ 1.66
CHRNA7-228ENST00000637519 METAP2P50579 478 aaKnown RBP eCLIP25.4■■□□□ 1.66
CHRNA7-228ENST00000637519 H0YIN7 160 aa25.39■■□□□ 1.65
CHRNA7-228ENST00000637519 USP17L8P0C7I0 530 aa25.39■■□□□ 1.65
CHRNA7-228ENST00000637519 CDC27P30260 824 aa25.39■■□□□ 1.65
CHRNA7-228ENST00000637519 MXD3Q9BW11 206 aa25.39■■□□□ 1.65
CHRNA7-228ENST00000637519 RTFDC1Q9BY42 306 aaPredicted RBP25.39■■□□□ 1.65
CHRNA7-228ENST00000637519 MROH7-TTC4A0A0A0MT08 1334 aa25.39■■□□□ 1.65
CHRNA7-228ENST00000637519 CPLX1O14810 134 aa25.38■■□□□ 1.65
CHRNA7-228ENST00000637519 GIMAP6Q6P9H5 292 aa25.38■■□□□ 1.65
CHRNA7-228ENST00000637519 ZC3H12CQ9C0D7 883 aaKnown RBP25.38■■□□□ 1.65
CHRNA7-228ENST00000637519 SGMS1Q86VZ5 419 aa25.38■■□□□ 1.65
CHRNA7-228ENST00000637519 ATP8A2Q9NTI2 1148 aa25.38■■□□□ 1.65
CHRNA7-228ENST00000637519 MCM9Q9NXL9 1143 aa25.38■■□□□ 1.65
CHRNA7-228ENST00000637519 TAOK2Q9UL54 1235 aa25.38■■□□□ 1.65
CHRNA7-228ENST00000637519 ZBTB43O43298 467 aa25.37■■□□□ 1.65
CHRNA7-228ENST00000637519 GSTO1P78417 241 aa25.37■■□□□ 1.65
CHRNA7-228ENST00000637519 OTUD7BQ6GQQ9 843 aa25.37■■□□□ 1.65
CHRNA7-228ENST00000637519 GJB4Q9NTQ9 266 aa25.37■■□□□ 1.65
CHRNA7-228ENST00000637519 MYH2Q9UKX2 1941 aa25.37■■□□□ 1.65
CHRNA7-228ENST00000637519 SLX4Q8IY92 1834 aa25.37■■□□□ 1.65
CHRNA7-228ENST00000637519 F8W031 263 aaPredicted RBP25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 RANBP6O60518 1105 aaKnown RBP25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 BTDP43251 543 aa25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 USP5P45974 858 aa25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 RESTQ13127 1097 aa25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 COA1Q9GZY4 146 aa25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 LAMB1P07942 1786 aa25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 CCDC69A6NI79 296 aa25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 GOLGA8AA7E2F4 631 aa25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 LIFRP42702 1097 aa25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 WTAPQ15007 396 aa25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 TMEM87AQ8NBN3 555 aa25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 ESR2Q92731 530 aa25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 SLC12A7Q9Y666 1083 aa25.36■■□□□ 1.65
CHRNA7-228ENST00000637519 TNKSO95271 1327 aa25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 CERS5Q8N5B7 392 aa25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 TGFBRAP1Q8WUH2 860 aa25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 TMEM63CQ9P1W3 806 aa25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 ORC3Q9UBD5 711 aaPredicted RBP25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 QSER1Q2KHR3 1735 aa25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 DHX16O60231 1041 aaKnown RBP25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 STYK1Q6J9G0 422 aa25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 PHKBQ93100 1093 aa25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 UBAC1Q9BSL1 405 aa25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 TMX4Q9H1E5 349 aaPredicted RBP25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 DBNDD1Q9H9R9 158 aa25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 FAM217BQ9NTX9 383 aaPredicted RBP25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 ARPP21Q9UBL0 812 aaPredicted RBP25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 MKRN1Q9UHC7 482 aaKnown RBP25.35■■□□□ 1.65
CHRNA7-228ENST00000637519 FAM205AQ6ZU69 1335 aa25.34■■□□□ 1.65
CHRNA7-228ENST00000637519 GAS2L3Q86XJ1 694 aa25.34■■□□□ 1.65
CHRNA7-228ENST00000637519 MAPKAPK5Q8IW41 473 aa25.34■■□□□ 1.65
CHRNA7-228ENST00000637519 TFIP11Q9UBB9 837 aaKnown RBP25.34■■□□□ 1.65
CHRNA7-228ENST00000637519 UBE2Q2LH0YL09 131 aa25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 BAG3O95817 575 aa25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 PDIA4P13667 645 aaKnown RBP25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 SART3Q15020 963 aaKnown RBP25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 AIFM3Q96NN9 605 aa25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 NOL10Q9BSC4 688 aaKnown RBP25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 KCNQ5Q9NR82 932 aa25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 SAP30BPQ9UHR5 308 aaKnown RBP25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 DDX52Q9Y2R4 599 aaKnown RBP eCLIP25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 KIF3AQ9Y496 699 aa25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 ERICH2A1L162 156 aa25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 FAM47AQ5JRC9 791 aa25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 TMED8Q6PL24 325 aaPredicted RBP25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 TBC1D22AQ8WUA7 517 aa25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 DYNLL2Q96FJ2 89 aa25.33■■□□□ 1.65
CHRNA7-228ENST00000637519 NMT2O60551 498 aa25.32■■□□□ 1.64
CHRNA7-228ENST00000637519 LDHCP07864 332 aa25.32■■□□□ 1.64
CHRNA7-228ENST00000637519 PPP4CP60510 307 aa25.32■■□□□ 1.64
CHRNA7-228ENST00000637519 ZSCAN23Q3MJ62 389 aa25.32■■□□□ 1.64
CHRNA7-228ENST00000637519 FGRP09769 529 aa25.32■■□□□ 1.64
CHRNA7-228ENST00000637519 KRT85P78386 507 aa25.32■■□□□ 1.64
CHRNA7-228ENST00000637519 SEC23AQ15436 765 aa25.32■■□□□ 1.64
CHRNA7-228ENST00000637519 TTC6Q86TZ1 520 aa25.32■■□□□ 1.64
CHRNA7-228ENST00000637519 ENAHQ8N8S7 591 aaPredicted RBP25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms