RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 DDX19BQ9UMR2 479 aa23.24■■□□□ 1.31
CLN6-221ENST00000637494 FBXO46Q6PJ61 603 aaPredicted RBP23.23■■□□□ 1.31
CLN6-221ENST00000637494 ZNF112Q9UJU3 913 aa23.23■■□□□ 1.31
CLN6-221ENST00000637494 IRF6O14896 467 aa23.22■■□□□ 1.31
CLN6-221ENST00000637494 ARHGEF6Q15052 776 aa23.22■■□□□ 1.31
CLN6-221ENST00000637494 ZFPM1Q8IX07 1006 aa23.22■■□□□ 1.31
CLN6-221ENST00000637494 SNRKQ9NRH2 765 aa23.22■■□□□ 1.31
CLN6-221ENST00000637494 HPS5Q9UPZ3 1129 aa23.22■■□□□ 1.31
CLN6-221ENST00000637494 IGSF3O75054 1194 aa23.21■■□□□ 1.31
CLN6-221ENST00000637494 HMMRO75330 724 aa23.21■■□□□ 1.31
CLN6-221ENST00000637494 BAG3O95817 575 aa23.21■■□□□ 1.31
CLN6-221ENST00000637494 SP3Q02447 781 aa23.21■■□□□ 1.31
CLN6-221ENST00000637494 MLLT1Q03111 559 aaPredicted RBP23.21■■□□□ 1.31
CLN6-221ENST00000637494 NOL9Q5SY16 702 aaKnown RBP23.21■■□□□ 1.31
CLN6-221ENST00000637494 NAA16Q6N069 864 aaPredicted RBP23.21■■□□□ 1.31
CLN6-221ENST00000637494 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.21■■□□□ 1.31
CLN6-221ENST00000637494 ZNF512BQ96KM6 892 aaPredicted RBP23.21■■□□□ 1.31
CLN6-221ENST00000637494 ZCCHC17Q9NP64 241 aaKnown RBP23.21■■□□□ 1.31
CLN6-221ENST00000637494 DOCK2Q92608 1830 aa23.2■■□□□ 1.3
CLN6-221ENST00000637494 NPM3O75607 178 aaKnown RBP23.2■■□□□ 1.3
CLN6-221ENST00000637494 RPAP2Q8IXW5 612 aaPredicted RBP23.2■■□□□ 1.3
CLN6-221ENST00000637494 CCDC8Q9H0W5 538 aaPredicted RBP23.2■■□□□ 1.3
CLN6-221ENST00000637494 PICK1Q9NRD5 415 aa23.2■■□□□ 1.3
CLN6-221ENST00000637494 EXOC6BQ9Y2D4 811 aa23.2■■□□□ 1.3
CLN6-221ENST00000637494 TRIM17Q9Y577 477 aa23.2■■□□□ 1.3
CLN6-221ENST00000637494 RFX7Q2KHR2 1363 aa23.19■■□□□ 1.3
CLN6-221ENST00000637494 PLCG2P16885 1265 aa23.19■■□□□ 1.3
CLN6-221ENST00000637494 RGS19P49795 217 aa23.19■■□□□ 1.3
CLN6-221ENST00000637494 DDX4Q9NQI0 724 aaKnown RBP23.19■■□□□ 1.3
CLN6-221ENST00000637494 COG6Q9Y2V7 657 aa23.19■■□□□ 1.3
CLN6-221ENST00000637494 RHBDL3P58872 404 aa23.18■■□□□ 1.3
CLN6-221ENST00000637494 TEX11Q8IYF3 940 aa23.18■■□□□ 1.3
CLN6-221ENST00000637494 FAM43AQ8N2R8 423 aa23.18■■□□□ 1.3
CLN6-221ENST00000637494 CD99L2Q8TCZ2 262 aa23.18■■□□□ 1.3
CLN6-221ENST00000637494 DBNLQ9UJU6 430 aaKnown RBP23.18■■□□□ 1.3
CLN6-221ENST00000637494 DDTLA6NHG4 134 aaPredicted RBP23.17■■□□□ 1.3
CLN6-221ENST00000637494 BTBD19C9JJ37 291 aa23.17■■□□□ 1.3
CLN6-221ENST00000637494 AACSQ86V21 672 aa23.17■■□□□ 1.3
CLN6-221ENST00000637494 SCYL3Q8IZE3 742 aa23.17■■□□□ 1.3
CLN6-221ENST00000637494 ZNF384Q8TF68 577 aa23.17■■□□□ 1.3
CLN6-221ENST00000637494 EAF2Q96CJ1 260 aaPredicted RBP23.17■■□□□ 1.3
CLN6-221ENST00000637494 EFCC1Q9HA90 598 aa23.17■■□□□ 1.3
CLN6-221ENST00000637494 CYP2E1P05181 493 aaPredicted RBP23.16■■□□□ 1.3
CLN6-221ENST00000637494 ZAP70P43403 619 aa23.16■■□□□ 1.3
CLN6-221ENST00000637494 KIF22Q14807 665 aa23.16■■□□□ 1.3
CLN6-221ENST00000637494 SH3BP5LQ7L8J4 393 aa23.16■■□□□ 1.3
CLN6-221ENST00000637494 OTOP1Q7RTM1 612 aa23.16■■□□□ 1.3
CLN6-221ENST00000637494 KCNH4Q9UQ05 1017 aa23.16■■□□□ 1.3
CLN6-221ENST00000637494 MAST2Q6P0Q8 1798 aa23.15■■□□□ 1.3
CLN6-221ENST00000637494 CTNND1O60716 968 aaKnown RBP23.15■■□□□ 1.3
CLN6-221ENST00000637494 SOX10P56693 466 aa23.15■■□□□ 1.3
CLN6-221ENST00000637494 MAP3K10Q02779 954 aa23.15■■□□□ 1.3
CLN6-221ENST00000637494 ANKRD23Q86SG2 305 aa23.15■■□□□ 1.3
CLN6-221ENST00000637494 OSBPL5Q9H0X9 879 aaPredicted RBP23.15■■□□□ 1.3
CLN6-221ENST00000637494 XPO5Q9HAV4 1204 aaKnown RBP eCLIP23.15■■□□□ 1.3
CLN6-221ENST00000637494 AATFQ9NY61 560 aaKnown RBP eCLIP23.15■■□□□ 1.3
CLN6-221ENST00000637494 TLR7Q9NYK1 1049 aaKnown RBP23.15■■□□□ 1.3
CLN6-221ENST00000637494 ATRNL1Q5VV63 1379 aa23.14■■□□□ 1.3
CLN6-221ENST00000637494 PHF20L1A8MW92 1017 aa23.14■■□□□ 1.29
CLN6-221ENST00000637494 CXCL11O14625 94 aa23.14■■□□□ 1.29
CLN6-221ENST00000637494 TBC1D12O60347 775 aa23.14■■□□□ 1.29
CLN6-221ENST00000637494 TLR2O60603 784 aa23.14■■□□□ 1.29
CLN6-221ENST00000637494 CLASRPQ8N2M8 674 aaKnown RBP23.14■■□□□ 1.29
CLN6-221ENST00000637494 KIF1BPQ96EK5 621 aa23.14■■□□□ 1.29
CLN6-221ENST00000637494 ZBTB40Q9NUA8 1239 aa23.14■■□□□ 1.29
CLN6-221ENST00000637494 COL2A1P02458 1487 aaPredicted RBP23.13■■□□□ 1.29
CLN6-221ENST00000637494 RHPN1Q8TCX5 695 aa23.13■■□□□ 1.29
CLN6-221ENST00000637494 SH3RF3Q8TEJ3 882 aaPredicted RBP23.13■■□□□ 1.29
CLN6-221ENST00000637494 ZHX2Q9Y6X8 837 aa23.13■■□□□ 1.29
CLN6-221ENST00000637494 APBB1O00213 710 aa23.12■■□□□ 1.29
CLN6-221ENST00000637494 IDH1O75874 414 aaKnown RBP23.12■■□□□ 1.29
CLN6-221ENST00000637494 PTPRAP18433 802 aa23.12■■□□□ 1.29
CLN6-221ENST00000637494 PDE3AQ14432 1141 aa23.12■■□□□ 1.29
CLN6-221ENST00000637494 FASTKD5Q7L8L6 764 aaKnown RBP23.12■■□□□ 1.29
CLN6-221ENST00000637494 CERS3Q8IU89 383 aa23.12■■□□□ 1.29
CLN6-221ENST00000637494 DHX36Q9H2U1 1008 aaKnown RBP23.12■■□□□ 1.29
CLN6-221ENST00000637494 IL1RAPL2Q9NP60 686 aa23.12■■□□□ 1.29
CLN6-221ENST00000637494 PDHXO00330 501 aa23.11■■□□□ 1.29
CLN6-221ENST00000637494 RAB11FIP3O75154 756 aa23.11■■□□□ 1.29
CLN6-221ENST00000637494 PPP4CP60510 307 aa23.11■■□□□ 1.29
CLN6-221ENST00000637494 MAP3K12Q12852 859 aa23.11■■□□□ 1.29
CLN6-221ENST00000637494 TMED8Q6PL24 325 aaPredicted RBP23.11■■□□□ 1.29
CLN6-221ENST00000637494 TRIM34Q9BYJ4 488 aa23.11■■□□□ 1.29
CLN6-221ENST00000637494 PIH1D3Q9NQM4 214 aaKnown RBP23.11■■□□□ 1.29
CLN6-221ENST00000637494 HERC5Q9UII4 1024 aaKnown RBP23.11■■□□□ 1.29
CLN6-221ENST00000637494 PTPN22Q9Y2R2 807 aa23.11■■□□□ 1.29
CLN6-221ENST00000637494 IFIT2P09913 472 aaKnown RBP23.1■■□□□ 1.29
CLN6-221ENST00000637494 CYP7A1P22680 504 aa23.1■■□□□ 1.29
CLN6-221ENST00000637494 PARK7Q99497 189 aaKnown RBP23.1■■□□□ 1.29
CLN6-221ENST00000637494 TTF1Q15361 905 aaPredicted RBP23.09■■□□□ 1.29
CLN6-221ENST00000637494 GADL1Q6ZQY3 521 aa23.09■■□□□ 1.29
CLN6-221ENST00000637494 TGFBRAP1Q8WUH2 860 aa23.09■■□□□ 1.29
CLN6-221ENST00000637494 PI4KBQ9UBF8 816 aa23.09■■□□□ 1.29
CLN6-221ENST00000637494 MAPKAPK5Q8IW41 473 aa23.08■■□□□ 1.29
CLN6-221ENST00000637494 TBC1D2Q9BYX2 928 aa23.08■■□□□ 1.29
CLN6-221ENST00000637494 BCL11AQ9H165 835 aa23.08■■□□□ 1.29
CLN6-221ENST00000637494 AFG3L2Q9Y4W6 797 aa23.08■■□□□ 1.29
CLN6-221ENST00000637494 DOCK1Q14185 1865 aa23.08■■□□□ 1.29
CLN6-221ENST00000637494 A0A0G2JLL6 359 aaPredicted RBP23.07■■□□□ 1.28
CLN6-221ENST00000637494 GNRH1P01148 92 aa23.07■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms