RNA–Protein interactions for RNA: ENST00000637278.1

CLN5-217, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 2

Gene CLN5, Length 2,863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-217ENST00000637278 PSMD2Q13200 908 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 CHADLQ6NUI6 762 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 NME9Q86XW9 330 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 MARCH10Q8NA82 808 aaPredicted RBP9.03□□□□□ -0.96
CLN5-217ENST00000637278 TESK2Q96S53 571 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 STK32BQ9NY57 414 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 ZIM2Q9NZV7 527 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 RABL2AQ9UBK7 228 aaPredicted RBP9.03□□□□□ -0.96
CLN5-217ENST00000637278 USP47Q96K76 1375 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 ZBBXA8MT70 800 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 XBP1P17861 261 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 MZF1P28698 734 aaPredicted RBP9.03□□□□□ -0.96
CLN5-217ENST00000637278 ZSCAN26Q16670 478 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 INF2Q27J81 1249 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 ANKRD24Q8TF21 1146 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 HNRNPLLQ8WVV9 542 aaKnown RBP9.03□□□□□ -0.96
CLN5-217ENST00000637278 TRERF1Q96PN7 1200 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 RETREG1Q9H6L5 497 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 BRMS1Q9HCU9 246 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 PCDHGC3Q9UN70 934 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 ANKRD26Q9UPS8 1709 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 ERBB4Q15303 1308 aa9.03□□□□□ -0.96
CLN5-217ENST00000637278 PSMC1P62191 440 aaKnown RBP9.02□□□□□ -0.96
CLN5-217ENST00000637278 AMOTQ4VCS5 1084 aa9.02□□□□□ -0.96
CLN5-217ENST00000637278 CEP63Q96MT8 703 aa9.02□□□□□ -0.96
CLN5-217ENST00000637278 HOMER2Q9NSB8 354 aa9.02□□□□□ -0.96
CLN5-217ENST00000637278 SPG7Q9UQ90 795 aa9.02□□□□□ -0.96
CLN5-217ENST00000637278 HMGB1P1B2RPK0 211 aaPredicted RBP9.02□□□□□ -0.97
CLN5-217ENST00000637278 IFRD1O00458 451 aaPredicted RBP9.02□□□□□ -0.97
CLN5-217ENST00000637278 TSPAN6O43657 245 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 CDC45O75419 566 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 ERAP2Q6P179 960 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 IQCF2Q8IXL9 164 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 ELOA2Q8IYF1 753 aaPredicted RBP9.02□□□□□ -0.97
CLN5-217ENST00000637278 C8orf48Q96LL4 319 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 EPAS1Q99814 870 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 COPRSQ9NQ92 184 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 CCDC87Q9NVE4 849 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 NLRP2Q9NX02 1062 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 MYOM1P52179 1685 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 CCP110O43303 1012 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 HIP1RO75146 1068 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 RNASEH2AO75792 299 aaKnown RBP9.02□□□□□ -0.97
CLN5-217ENST00000637278 FBXO45P0C2W1 286 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 KCNA2P16389 499 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 MYRIPQ8NFW9 859 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 SLC12A5Q9H2X9 1139 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 PCDHB9Q9Y5E1 797 aa9.02□□□□□ -0.97
CLN5-217ENST00000637278 COL24A1Q17RW2 1714 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 TIMM44O43615 452 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 C21orf2O43822 256 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 RASA3Q14644 834 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 CDC37Q16543 378 aaPredicted RBP9.01□□□□□ -0.97
CLN5-217ENST00000637278 CTR9Q6PD62 1173 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 CLASRPQ8N2M8 674 aaKnown RBP9.01□□□□□ -0.97
CLN5-217ENST00000637278 CCDC47Q96A33 483 aaKnown RBP9.01□□□□□ -0.97
CLN5-217ENST00000637278 NAP1L4Q99733 375 aaKnown RBP9.01□□□□□ -0.97
CLN5-217ENST00000637278 LZTS2Q9BRK4 669 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 CCDC8Q9H0W5 538 aaPredicted RBP9.01□□□□□ -0.97
CLN5-217ENST00000637278 ALDH8A1Q9H2A2 487 aaPredicted RBP9.01□□□□□ -0.97
CLN5-217ENST00000637278 ABCF2Q9UG63 623 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 IL16Q14005 1332 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 DOT1LQ8TEK3 1739 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 SHANK3Q9BYB0 1731 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 UQCRHLA0A096LP55 91 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 MAP3K13O43283 966 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 UQCRHP07919 91 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 ELOAQ14241 798 aaKnown RBP9.01□□□□□ -0.97
CLN5-217ENST00000637278 MEI1Q5TIA1 1274 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 ALKBH2Q6NS38 261 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 PADI6Q6TGC4 694 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 PXYLP1Q8TE99 480 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 PARD3BQ8TEW8 1205 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 RWDD1Q9H446 243 aaPredicted RBP9.01□□□□□ -0.97
CLN5-217ENST00000637278 EP400Q96L91 3159 aa9.01□□□□□ -0.97
CLN5-217ENST00000637278 LY75O60449 1722 aa9□□□□□ -0.97
CLN5-217ENST00000637278 ST20-MTHFSA0A0A6YYL1 179 aa9□□□□□ -0.97
CLN5-217ENST00000637278 SLC7A5Q01650 507 aa9□□□□□ -0.97
CLN5-217ENST00000637278 RASSF7Q02833 373 aa9□□□□□ -0.97
CLN5-217ENST00000637278 SLC27A3Q5K4L6 730 aa9□□□□□ -0.97
CLN5-217ENST00000637278 RGL4Q8IZJ4 473 aa9□□□□□ -0.97
CLN5-217ENST00000637278 EVLQ9UI08 416 aaPredicted RBP9□□□□□ -0.97
CLN5-217ENST00000637278 DDX41Q9UJV9 622 aaKnown RBP9□□□□□ -0.97
CLN5-217ENST00000637278 ITM2BQ9Y287 266 aa9□□□□□ -0.97
CLN5-217ENST00000637278 KNSTRNQ9Y448 316 aa9□□□□□ -0.97
CLN5-217ENST00000637278 SCINQ9Y6U3 715 aa9□□□□□ -0.97
CLN5-217ENST00000637278 GPR182O15218 404 aa9□□□□□ -0.97
CLN5-217ENST00000637278 MASP1P48740 699 aa9□□□□□ -0.97
CLN5-217ENST00000637278 SERINC3Q13530 473 aa9□□□□□ -0.97
CLN5-217ENST00000637278 ALDH1L2Q3SY69 923 aa9□□□□□ -0.97
CLN5-217ENST00000637278 INO80DQ53TQ3 878 aaPredicted RBP9□□□□□ -0.97
CLN5-217ENST00000637278 LARP1BQ659C4 914 aaKnown RBP9□□□□□ -0.97
CLN5-217ENST00000637278 TRIML1Q8N9V2 468 aa9□□□□□ -0.97
CLN5-217ENST00000637278 DNAJC7Q99615 494 aa9□□□□□ -0.97
CLN5-217ENST00000637278 MKS1Q9NXB0 559 aa9□□□□□ -0.97
CLN5-217ENST00000637278 MAP3K5Q99683 1374 aa9□□□□□ -0.97
CLN5-217ENST00000637278 FAM196BA6NMK8 535 aa8.99□□□□□ -0.97
CLN5-217ENST00000637278 CFAP99D6REC4 459 aa8.99□□□□□ -0.97
CLN5-217ENST00000637278 DYNC1I1O14576 645 aa8.99□□□□□ -0.97
CLN5-217ENST00000637278 EPB42P16452 691 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 86.1 ms