RNA–Protein interactions for RNA: ENST00000637083.1

CLN8-212, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLN8, Length 2,001 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-212ENST00000637083 CMA1P23946 247 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 SLC39A14Q15043 492 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 NTRK3Q16288 839 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 DNTTIP2Q5QJE6 756 aaKnown RBP14.05□□□□□ -0.16
CLN8-212ENST00000637083 ANKRD2Q9GZV1 360 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 TTC12Q9H892 705 aaPredicted RBP14.05□□□□□ -0.16
CLN8-212ENST00000637083 ANAPC4Q9UJX5 808 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 IGSF3O75054 1194 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 CDC27P30260 824 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 ZNF75DP51815 510 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 PPARAQ07869 468 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 SMIM5Q71RC9 77 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 PLA2G4DQ86XP0 818 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 ESR2Q92731 530 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 TIGD1Q96MW7 591 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 NLRP3Q96P20 1036 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 ABCF2Q9UG63 623 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 NARFQ9UHQ1 456 aa14.05□□□□□ -0.16
CLN8-212ENST00000637083 PDS5AQ29RF7 1337 aaKnown RBP14.04□□□□□ -0.16
CLN8-212ENST00000637083 RPS6KA4O75676 772 aa14.04□□□□□ -0.16
CLN8-212ENST00000637083 U2AF2P26368 475 aaKnown RBP eCLIP14.04□□□□□ -0.164e-7■■■■■ 30.7
CLN8-212ENST00000637083 RTN1Q16799 776 aa14.04□□□□□ -0.16
CLN8-212ENST00000637083 C3orf67Q6ZVT6 689 aa14.04□□□□□ -0.16
CLN8-212ENST00000637083 SETDB2Q96T68 719 aa14.04□□□□□ -0.16
CLN8-212ENST00000637083 UBAC1Q9BSL1 405 aa14.04□□□□□ -0.16
CLN8-212ENST00000637083 A0A1B0GVL5 298 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 KIF28PB7ZC32 967 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 ZPR1O75312 459 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 TPM4P67936 248 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 IQCB1Q15051 598 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 RRP12Q5JTH9 1297 aaKnown RBP14.03□□□□□ -0.16
CLN8-212ENST00000637083 SPC24Q8NBT2 197 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 SLC26A6Q9BXS9 759 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 BCL2L12Q9HB09 334 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 SPTLC3Q9NUV7 552 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 MINPP1Q9UNW1 487 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 CHD4Q14839 1912 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 ZBTB22O15209 634 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 PRKAB2O43741 272 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 DEXIO95424 95 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 NDUFA8P51970 172 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 RBM6P78332 1123 aaKnown RBP14.03□□□□□ -0.16
CLN8-212ENST00000637083 TPTE2Q6XPS3 522 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 BICDL1Q6ZP65 573 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 MIGA1Q8NAN2 632 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 PHKBQ93100 1093 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 MRFAP1L1Q96HT8 127 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 ZNF830Q96NB3 372 aaPredicted RBP14.03□□□□□ -0.16
CLN8-212ENST00000637083 BRIP1Q9BX63 1249 aa14.03□□□□□ -0.16
CLN8-212ENST00000637083 SCN7AQ01118 1682 aa14.02□□□□□ -0.16
CLN8-212ENST00000637083 RXRAP19793 462 aa14.02□□□□□ -0.16
CLN8-212ENST00000637083 GYG1P46976 350 aa14.02□□□□□ -0.16
CLN8-212ENST00000637083 RPS8P62241 208 aaKnown RBP14.02□□□□□ -0.16
CLN8-212ENST00000637083 TBC1D9BQ66K14 1250 aa14.02□□□□□ -0.16
CLN8-212ENST00000637083 PRIMPOLQ96LW4 560 aa14.02□□□□□ -0.16
CLN8-212ENST00000637083 BPIFA3Q9BQP9 254 aa14.02□□□□□ -0.16
CLN8-212ENST00000637083 FAM217BQ9NTX9 383 aaPredicted RBP14.02□□□□□ -0.16
CLN8-212ENST00000637083 KIAA1468Q9P260 1216 aa14.02□□□□□ -0.16
CLN8-212ENST00000637083 USP21Q9UK80 565 aa14.02□□□□□ -0.16
CLN8-212ENST00000637083 NEMFO60524 1076 aa14.02□□□□□ -0.17
CLN8-212ENST00000637083 ZNF202O95125 648 aa14.02□□□□□ -0.17
CLN8-212ENST00000637083 SLC3A2P08195 630 aaKnown RBP14.02□□□□□ -0.17
CLN8-212ENST00000637083 XBP1P17861 261 aa14.02□□□□□ -0.17
CLN8-212ENST00000637083 CCDC144CPQ8IYA2 1237 aa14.02□□□□□ -0.17
CLN8-212ENST00000637083 NKX2-3Q8TAU0 364 aa14.02□□□□□ -0.17
CLN8-212ENST00000637083 KIAA1524Q8TCG1 905 aa14.02□□□□□ -0.17
CLN8-212ENST00000637083 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.02□□□□□ -0.17
CLN8-212ENST00000637083 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.02□□□□□ -0.17
CLN8-212ENST00000637083 CLIP2Q9UDT6 1046 aa14.02□□□□□ -0.17
CLN8-212ENST00000637083 MINDY4BA8MYZ0 360 aa14.01□□□□□ -0.17
CLN8-212ENST00000637083 CUTAO60888 179 aa14.01□□□□□ -0.17
CLN8-212ENST00000637083 NT5C2P49902 561 aa14.01□□□□□ -0.17
CLN8-212ENST00000637083 DHX8Q14562 1220 aaKnown RBP14.01□□□□□ -0.17
CLN8-212ENST00000637083 AXDND1Q5T1B0 1012 aaPredicted RBP14.01□□□□□ -0.17
CLN8-212ENST00000637083 C11orf57Q6ZUT1 292 aaPredicted RBP14.01□□□□□ -0.17
CLN8-212ENST00000637083 FBXO33Q7Z6M2 555 aa14.01□□□□□ -0.17
CLN8-212ENST00000637083 NBPF5PQ86XG9 351 aaPredicted RBP14.01□□□□□ -0.17
CLN8-212ENST00000637083 FAM84BQ96KN1 310 aaPredicted RBP14.01□□□□□ -0.17
CLN8-212ENST00000637083 RIOK1Q9BRS2 568 aaKnown RBP14.01□□□□□ -0.17
CLN8-212ENST00000637083 SENP2Q9HC62 589 aa14.01□□□□□ -0.17
CLN8-212ENST00000637083 WTIPA6NIX2 430 aaPredicted RBP14□□□□□ -0.17
CLN8-212ENST00000637083 SMTNL1A8MU46 457 aa14□□□□□ -0.17
CLN8-212ENST00000637083 RANBP6O60518 1105 aaKnown RBP14□□□□□ -0.17
CLN8-212ENST00000637083 CALM1P0DP23 149 aa14□□□□□ -0.17
CLN8-212ENST00000637083 CALM2P0DP24 149 aa14□□□□□ -0.17
CLN8-212ENST00000637083 CALM3P0DP25 149 aa14□□□□□ -0.17
CLN8-212ENST00000637083 AKAP17AQ02040 695 aaKnown RBP14□□□□□ -0.17
CLN8-212ENST00000637083 FAM182BQ5T319 152 aa14□□□□□ -0.17
CLN8-212ENST00000637083 IQCA1Q86XH1 822 aa14□□□□□ -0.17
CLN8-212ENST00000637083 ZNF654Q8IZM8 581 aa14□□□□□ -0.17
CLN8-212ENST00000637083 MPNDQ8N594 471 aa14□□□□□ -0.17
CLN8-212ENST00000637083 FANCBQ8NB91 859 aa14□□□□□ -0.17
CLN8-212ENST00000637083 NOL10Q9BSC4 688 aaKnown RBP14□□□□□ -0.17
CLN8-212ENST00000637083 FOXP1Q9H334 677 aaPredicted RBP14□□□□□ -0.17
CLN8-212ENST00000637083 GJB4Q9NTQ9 266 aa14□□□□□ -0.17
CLN8-212ENST00000637083 HOOK1Q9UJC3 728 aaKnown RBP14□□□□□ -0.17
CLN8-212ENST00000637083 IQSEC3Q9UPP2 1182 aaPredicted RBP14□□□□□ -0.17
CLN8-212ENST00000637083 RTCBQ9Y3I0 505 aaKnown RBP14□□□□□ -0.17
CLN8-212ENST00000637083 FAM237AA0A1B0GTK4 181 aa14□□□□□ -0.17
CLN8-212ENST00000637083 MMP1P03956 469 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms