RNA–Protein interactions for RNA: ENST00000637004.1

CACNA1A-235, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

TSL 5

Gene CACNA1A, Length 2,829 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-235ENST00000637004 PLEKHG2Q9H7P9 1386 aa17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 PRC1O43663 620 aa17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 TUBBP07437 444 aa17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 PTPN21Q16825 1174 aa17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 METTL16Q86W50 562 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 MSANTD4Q8NCY6 345 aa17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 NEUROD6Q96NK8 337 aa17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 GBP3Q9H0R5 595 aa17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 MKRN1Q9UHC7 482 aaKnown RBP17.8■□□□□ 0.44
CACNA1A-235ENST00000637004 KIF5CO60282 957 aa17.79■□□□□ 0.44
CACNA1A-235ENST00000637004 SAMD1Q6SPF0 538 aaPredicted RBP17.79■□□□□ 0.44
CACNA1A-235ENST00000637004 COPS6Q7L5N1 327 aa17.79■□□□□ 0.44
CACNA1A-235ENST00000637004 BTG4Q9NY30 223 aa17.79■□□□□ 0.44
CACNA1A-235ENST00000637004 CCDC9Q9Y3X0 531 aaKnown RBP17.79■□□□□ 0.44
CACNA1A-235ENST00000637004 A0A1B0GUL7 405 aa17.79■□□□□ 0.44
CACNA1A-235ENST00000637004 MYL6BP14649 208 aa17.79■□□□□ 0.44
CACNA1A-235ENST00000637004 HSP90B2PQ58FF3 399 aa17.79■□□□□ 0.44
CACNA1A-235ENST00000637004 TTLL5Q6EMB2 1281 aa17.79■□□□□ 0.44
CACNA1A-235ENST00000637004 UBE3BQ7Z3V4 1068 aa17.79■□□□□ 0.44
CACNA1A-235ENST00000637004 ZSWIM4Q9H7M6 989 aa17.79■□□□□ 0.44
CACNA1A-235ENST00000637004 ANKZF1Q9H8Y5 726 aa17.79■□□□□ 0.44
CACNA1A-235ENST00000637004 GJB4Q9NTQ9 266 aa17.79■□□□□ 0.44
CACNA1A-235ENST00000637004 ANKRD13DQ6ZTN6 518 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 PANX2Q96RD6 677 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 DESI2Q9BSY9 194 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 NAA15Q9BXJ9 866 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 KCNH3Q9ULD8 1083 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 L1RE1Q9UN81 338 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 TRPM3Q9HCF6 1732 aaPredicted RBP17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 ZNF18P17022 549 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 MAGEA9P43362 315 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 PTPAQ15257 358 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 VPS37DQ86XT2 251 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 MLKLQ8NB16 471 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 ENOX1Q8TC92 643 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 ACBD3Q9H3P7 528 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 GPR108Q9NPR9 543 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 EIF4ENIF1Q9NRA8 985 aaKnown RBP17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 NFE2L3Q9Y4A8 694 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 LRP6O75581 1613 aa17.78■□□□□ 0.44
CACNA1A-235ENST00000637004 LONRF3Q496Y0 759 aa17.77■□□□□ 0.44
CACNA1A-235ENST00000637004 KCNH5Q8NCM2 988 aa17.77■□□□□ 0.44
CACNA1A-235ENST00000637004 RAI14Q9P0K7 980 aa17.77■□□□□ 0.44
CACNA1A-235ENST00000637004 AKR1B15C9JRZ8 316 aaPredicted RBP17.77■□□□□ 0.44
CACNA1A-235ENST00000637004 PDE4BQ07343 736 aa17.77■□□□□ 0.44
CACNA1A-235ENST00000637004 RALYLQ86SE5 291 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-235ENST00000637004 FOXP4Q8IVH2 680 aaPredicted RBP17.77■□□□□ 0.44
CACNA1A-235ENST00000637004 YY1AP1Q9H869 796 aa17.77■□□□□ 0.44
CACNA1A-235ENST00000637004 MRPL44Q9H9J2 332 aaKnown RBP17.77■□□□□ 0.44
CACNA1A-235ENST00000637004 CDKL5O76039 1030 aa17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 ARHGEF25Q86VW2 580 aa17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 NCOA7Q8NI08 942 aa17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 FAM71BQ8TC56 605 aa17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 ALG1Q9BT22 464 aa17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 PUF60Q9UHX1 559 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 WDR19Q8NEZ3 1342 aa17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 ICE2Q659A1 982 aa17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 MB21D2Q8IYB1 491 aaPredicted RBP17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 LTN1O94822 1766 aa17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 IFIT1P09914 478 aaKnown RBP17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 BMP6P22004 513 aa17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 HSP90AA4PQ58FG1 418 aa17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 MAP3K14Q99558 947 aa17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 LZTFL1Q9NQ48 299 aa17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 FAN1Q9Y2M0 1017 aa17.76■□□□□ 0.43
CACNA1A-235ENST00000637004 M0R2C6 588 aa17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 CDC27P30260 824 aa17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 TTC31Q49AM3 519 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 CPLX2Q6PUV4 134 aaKnown RBP17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 ABCB6Q9NP58 842 aa17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 ADGRG1Q9Y653 693 aa17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 A0A087WZG4 1122 aa17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 CTAGE9A4FU28 777 aa17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 KIF4BQ2VIQ3 1234 aa17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 KRT40Q6A162 431 aa17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 CLIC6Q96NY7 704 aa17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 PNKPQ96T60 521 aa17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 IRX2Q9BZI1 471 aaPredicted RBP17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 MED4Q9NPJ6 270 aa17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 MAN1B1Q9UKM7 699 aa17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 MAP3K15Q6ZN16 1313 aa17.75■□□□□ 0.43
CACNA1A-235ENST00000637004 GTF2A1P52655 376 aaPredicted RBP17.74■□□□□ 0.43
CACNA1A-235ENST00000637004 HAND2P61296 217 aa17.74■□□□□ 0.43
CACNA1A-235ENST00000637004 NR1I3Q14994 352 aa17.74■□□□□ 0.43
CACNA1A-235ENST00000637004 ZNF790Q6PG37 636 aa17.74■□□□□ 0.43
CACNA1A-235ENST00000637004 CSB-PGBD3P0DP91 1061 aa17.74■□□□□ 0.43
CACNA1A-235ENST00000637004 LMBR1LQ6UX01 489 aa17.74■□□□□ 0.43
CACNA1A-235ENST00000637004 PPFIBP1Q86W92 1011 aa17.74■□□□□ 0.43
CACNA1A-235ENST00000637004 CERS3Q8IU89 383 aa17.74■□□□□ 0.43
CACNA1A-235ENST00000637004 TRIML1Q8N9V2 468 aa17.74■□□□□ 0.43
CACNA1A-235ENST00000637004 NFAT5O94916 1531 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 SOWAHDA6NJG2 315 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 EVA1CP58658 441 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 TIMM10P62072 90 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 MDM2Q00987 491 aaPredicted RBP17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 CASP8Q14790 479 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 MTF1Q14872 753 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 POSTNQ15063 836 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 TTC39AQ5SRH9 613 aa17.73■□□□□ 0.43
CACNA1A-235ENST00000637004 KRI1Q8N9T8 703 aaKnown RBP17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms